RNA–Protein interactions for RNA: ENST00000572845.1

TVP23B-205, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5

Gene TVP23B, Length 483 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-205ENST00000572845 SGPP1Q9BX95 441 aa5.43□□□□□ -1.54
TVP23B-205ENST00000572845 RTEL1Q9NZ71 1219 aa5.43□□□□□ -1.54
TVP23B-205ENST00000572845 REV1Q9UBZ9 1251 aa5.43□□□□□ -1.54
TVP23B-205ENST00000572845 A0A0G2JLL6 359 aaPredicted RBP5.42□□□□□ -1.54
TVP23B-205ENST00000572845 N4BP3O15049 544 aa5.42□□□□□ -1.54
TVP23B-205ENST00000572845 PNLIPP16233 465 aa5.42□□□□□ -1.54
TVP23B-205ENST00000572845 ENDOUP21128 410 aaKnown RBP5.42□□□□□ -1.54
TVP23B-205ENST00000572845 TMEM62Q0P6H9 643 aa5.42□□□□□ -1.54
TVP23B-205ENST00000572845 BNC2Q6ZN30 1099 aaPredicted RBP5.42□□□□□ -1.54
TVP23B-205ENST00000572845 USHBP1Q8N6Y0 703 aa5.42□□□□□ -1.54
TVP23B-205ENST00000572845 BORCS6Q96GS4 357 aa5.42□□□□□ -1.54
TVP23B-205ENST00000572845 G6PC3Q9BUM1 346 aa5.42□□□□□ -1.54
TVP23B-205ENST00000572845 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.42□□□□□ -1.54
TVP23B-205ENST00000572845 EBF1Q9UH73 591 aa5.42□□□□□ -1.54
TVP23B-205ENST00000572845 MBD1Q9UIS9 605 aaPredicted RBP5.42□□□□□ -1.54
TVP23B-205ENST00000572845 SHISA3A0PJX4 238 aa5.41□□□□□ -1.54
TVP23B-205ENST00000572845 CHURC1-FNTBB4DL54 471 aa5.41□□□□□ -1.54
TVP23B-205ENST00000572845 RGS13O14921 159 aa5.41□□□□□ -1.54
TVP23B-205ENST00000572845 HTR3BO95264 441 aa5.41□□□□□ -1.54
TVP23B-205ENST00000572845 AFF3P51826 1226 aaKnown RBP5.41□□□□□ -1.54
TVP23B-205ENST00000572845 YBX1P67809 324 aaKnown RBP5.41□□□□□ -1.54
TVP23B-205ENST00000572845 DAB2P98082 770 aa5.41□□□□□ -1.54
TVP23B-205ENST00000572845 PSMD2Q13200 908 aa5.41□□□□□ -1.54
TVP23B-205ENST00000572845 CEP128Q6ZU80 1094 aa5.41□□□□□ -1.54
TVP23B-205ENST00000572845 WAPLQ7Z5K2 1190 aa5.41□□□□□ -1.54
TVP23B-205ENST00000572845 LINC00116Q8NCU8 138 aa5.41□□□□□ -1.54
TVP23B-205ENST00000572845 DACT3Q96B18 629 aaPredicted RBP5.41□□□□□ -1.54
TVP23B-205ENST00000572845 VWCEQ96DN2 955 aa5.41□□□□□ -1.54
TVP23B-205ENST00000572845 MAP6Q96JE9 813 aa5.41□□□□□ -1.54
TVP23B-205ENST00000572845 RSRP1Q9BUV0 290 aa5.41□□□□□ -1.54
TVP23B-205ENST00000572845 KLHL3Q9UH77 587 aa5.41□□□□□ -1.54
TVP23B-205ENST00000572845 NOTOA8MTQ0 251 aa5.4□□□□□ -1.54
TVP23B-205ENST00000572845 RBAK-RBAKDNI3L0D1 243 aa5.4□□□□□ -1.54
TVP23B-205ENST00000572845 SUPT5HO00267 1087 aaKnown RBP5.4□□□□□ -1.54
TVP23B-205ENST00000572845 TRIM13O60858 407 aa5.4□□□□□ -1.54
TVP23B-205ENST00000572845 F13A1P00488 732 aa5.4□□□□□ -1.54
TVP23B-205ENST00000572845 PF4P02776 101 aa5.4□□□□□ -1.54
TVP23B-205ENST00000572845 MPOP05164 745 aa5.4□□□□□ -1.54
TVP23B-205ENST00000572845 PI3P19957 117 aa5.4□□□□□ -1.54
TVP23B-205ENST00000572845 ARL4AP40617 200 aa5.4□□□□□ -1.54
TVP23B-205ENST00000572845 XPCQ01831 940 aaPredicted RBP5.4□□□□□ -1.54
TVP23B-205ENST00000572845 RAD51AP2Q09MP3 1159 aa5.4□□□□□ -1.54
TVP23B-205ENST00000572845 MPP2Q14168 576 aa5.4□□□□□ -1.54
TVP23B-205ENST00000572845 SSPNQ14714 243 aa5.4□□□□□ -1.54
TVP23B-205ENST00000572845 SIRT2Q8IXJ6 389 aa5.4□□□□□ -1.54
TVP23B-205ENST00000572845 SP8Q8IXZ3 490 aa5.4□□□□□ -1.54
TVP23B-205ENST00000572845 TNFRSF10DQ9UBN6 386 aa5.4□□□□□ -1.54
TVP23B-205ENST00000572845 TCFL5Q9UL49 500 aa5.4□□□□□ -1.54
TVP23B-205ENST00000572845 ADAMTS20P59510 1910 aa5.39□□□□□ -1.55
TVP23B-205ENST00000572845 LAPTM5Q13571 262 aa5.39□□□□□ -1.55
TVP23B-205ENST00000572845 GALNT18Q6P9A2 607 aa5.39□□□□□ -1.55
TVP23B-205ENST00000572845 HOMEZQ8IX15 550 aa5.39□□□□□ -1.55
TVP23B-205ENST00000572845 TCTN2Q96GX1 697 aa5.39□□□□□ -1.55
TVP23B-205ENST00000572845 TMEM74Q96NL1 305 aa5.39□□□□□ -1.55
TVP23B-205ENST00000572845 KIF2CQ99661 725 aa5.39□□□□□ -1.55
TVP23B-205ENST00000572845 HDAC8Q9BY41 377 aa5.39□□□□□ -1.55
TVP23B-205ENST00000572845 XYLT2Q9H1B5 865 aa5.39□□□□□ -1.55
TVP23B-205ENST00000572845 PARP2Q9UGN5 583 aa5.39□□□□□ -1.55
TVP23B-205ENST00000572845 ROBO2Q9HCK4 1378 aa5.39□□□□□ -1.55
TVP23B-205ENST00000572845 ANKRD33BA6NCL7 494 aa5.38□□□□□ -1.55
TVP23B-205ENST00000572845 WTIPA6NIX2 430 aaPredicted RBP5.38□□□□□ -1.55
TVP23B-205ENST00000572845 USP2O75604 605 aaPredicted RBP5.38□□□□□ -1.55
TVP23B-205ENST00000572845 CELA3BP08861 270 aa5.38□□□□□ -1.55
TVP23B-205ENST00000572845 VIPR1P32241 457 aa5.38□□□□□ -1.55
TVP23B-205ENST00000572845 GBP2P32456 591 aaPredicted RBP5.38□□□□□ -1.55
TVP23B-205ENST00000572845 RTP1P59025 263 aa5.38□□□□□ -1.55
TVP23B-205ENST00000572845 ERVFRD-1P60508 538 aa5.38□□□□□ -1.55
TVP23B-205ENST00000572845 TMC4Q7Z404 712 aa5.38□□□□□ -1.55
TVP23B-205ENST00000572845 FOXP3Q9BZS1 431 aa5.38□□□□□ -1.55
TVP23B-205ENST00000572845 CNTD2Q9H8S5 307 aa5.38□□□□□ -1.55
TVP23B-205ENST00000572845 JAG2Q9Y219 1238 aa5.38□□□□□ -1.55
TVP23B-205ENST00000572845 IRS4O14654 1257 aaPredicted RBP5.37□□□□□ -1.55
TVP23B-205ENST00000572845 RAG1P15918 1043 aa5.37□□□□□ -1.55
TVP23B-205ENST00000572845 RANGAP1P46060 587 aaPredicted RBP5.37□□□□□ -1.55
TVP23B-205ENST00000572845 GALK1P51570 392 aa5.37□□□□□ -1.55
TVP23B-205ENST00000572845 NBPF9Q3BBW0 867 aa5.37□□□□□ -1.55
TVP23B-205ENST00000572845 SNAP47Q5SQN1 464 aa5.37□□□□□ -1.55
TVP23B-205ENST00000572845 CNKSR3Q6P9H4 555 aa5.37□□□□□ -1.55
TVP23B-205ENST00000572845 REC114Q7Z4M0 266 aa5.37□□□□□ -1.55
TVP23B-205ENST00000572845 PANK1Q8TE04 598 aa5.37□□□□□ -1.55
TVP23B-205ENST00000572845 MZB1Q8WU39 189 aa5.37□□□□□ -1.55
TVP23B-205ENST00000572845 CRELD1Q96HD1 420 aa5.37□□□□□ -1.55
TVP23B-205ENST00000572845 HHIPL1Q96JK4 782 aa5.37□□□□□ -1.55
TVP23B-205ENST00000572845 RHOVQ96L33 236 aa5.37□□□□□ -1.55
TVP23B-205ENST00000572845 FCRL2Q96LA5 508 aaPredicted RBP5.37□□□□□ -1.55
TVP23B-205ENST00000572845 LUC7LQ9NQ29 371 aaKnown RBP5.37□□□□□ -1.55
TVP23B-205ENST00000572845 POLR3KQ9Y2Y1 108 aaPredicted RBP5.37□□□□□ -1.55
TVP23B-205ENST00000572845 OTOL1A6NHN0 477 aaPredicted RBP5.36□□□□□ -1.55
TVP23B-205ENST00000572845 SLC22A31A6NKX4 558 aa5.36□□□□□ -1.55
TVP23B-205ENST00000572845 GRIN3BO60391 1043 aa5.36□□□□□ -1.55
TVP23B-205ENST00000572845 CCNFP41002 786 aa5.36□□□□□ -1.55
TVP23B-205ENST00000572845 CWF19L2Q2TBE0 894 aaKnown RBP5.36□□□□□ -1.55
TVP23B-205ENST00000572845 NBPF12Q5TAG4 269 aaPredicted RBP5.36□□□□□ -1.55
TVP23B-205ENST00000572845 PRRT2Q7Z6L0 340 aaPredicted RBP5.36□□□□□ -1.55
TVP23B-205ENST00000572845 NLGN1Q8N2Q7 840 aa5.36□□□□□ -1.55
TVP23B-205ENST00000572845 GOLM1Q8NBJ4 401 aa5.36□□□□□ -1.55
TVP23B-205ENST00000572845 TEPSINQ96N21 525 aa5.36□□□□□ -1.55
TVP23B-205ENST00000572845 TAF6LQ9Y6J9 622 aa5.36□□□□□ -1.55
TVP23B-205ENST00000572845 A0A1W2PQ45 241 aaPredicted RBP5.35□□□□□ -1.55
TVP23B-205ENST00000572845 A0A1W2PQY0 241 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms