RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 APOBEC2Q9Y235 224 aaKnown RBP5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 MAGED1Q9Y5V3 778 aaPredicted RBP5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 SNX5Q9Y5X3 404 aa5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 SETD1BQ9UPS6 1966 aaKnown RBP5.89□□□□□ -1.47
TOPBP1-210ENST00000572787 A0A1W2PQH9 124 aa5.89□□□□□ -1.47
TOPBP1-210ENST00000572787 FAM83GA6ND36 823 aa5.89□□□□□ -1.47
TOPBP1-210ENST00000572787 EML1O00423 815 aa5.89□□□□□ -1.47
TOPBP1-210ENST00000572787 CDK2AP1O14519 115 aa5.89□□□□□ -1.47
TOPBP1-210ENST00000572787 MAFKO60675 156 aa5.89□□□□□ -1.47
TOPBP1-210ENST00000572787 DXOO77932 396 aaKnown RBP5.89□□□□□ -1.47
TOPBP1-210ENST00000572787 BAG2O95816 211 aa5.89□□□□□ -1.47
TOPBP1-210ENST00000572787 POLR3DP05423 398 aaPredicted RBP5.89□□□□□ -1.47
TOPBP1-210ENST00000572787 ASGR2P07307 311 aa5.89□□□□□ -1.47
TOPBP1-210ENST00000572787 KCNA2P16389 499 aa5.89□□□□□ -1.47
TOPBP1-210ENST00000572787 HSPA6P17066 643 aa5.89□□□□□ -1.47
TOPBP1-210ENST00000572787 CTNNA1P35221 906 aaKnown RBP5.89□□□□□ -1.47
TOPBP1-210ENST00000572787 CHKAP35790 457 aa5.89□□□□□ -1.47
TOPBP1-210ENST00000572787 PLA2G4AP47712 749 aa5.89□□□□□ -1.47
TOPBP1-210ENST00000572787 ERVK-9P63128 1117 aa5.89□□□□□ -1.47
TOPBP1-210ENST00000572787 MPP1Q00013 466 aa5.89□□□□□ -1.47
TOPBP1-210ENST00000572787 PLIN5Q00G26 463 aa5.89□□□□□ -1.47
TOPBP1-210ENST00000572787 PPFIA1Q13136 1202 aa5.89□□□□□ -1.47
TOPBP1-210ENST00000572787 AGERQ15109 404 aa5.89□□□□□ -1.47
TOPBP1-210ENST00000572787 PCBP1Q15365 356 aaKnown RBP eCLIP5.89□□□□□ -1.47
TOPBP1-210ENST00000572787 ABCB5Q2M3G0 1257 aa5.89□□□□□ -1.47
TOPBP1-210ENST00000572787 SLC10A5Q5PT55 438 aa5.89□□□□□ -1.47
TOPBP1-210ENST00000572787 FOXB2Q5VYV0 432 aa5.89□□□□□ -1.47
TOPBP1-210ENST00000572787 HIBCHQ6NVY1 386 aaPredicted RBP5.89□□□□□ -1.47
TOPBP1-210ENST00000572787 AGMOQ6ZNB7 445 aa5.89□□□□□ -1.47
TOPBP1-210ENST00000572787 FASTKD5Q7L8L6 764 aaKnown RBP5.89□□□□□ -1.47
TOPBP1-210ENST00000572787 ZNF438Q7Z4V0 828 aa5.89□□□□□ -1.47
TOPBP1-210ENST00000572787 DAAM2Q86T65 1068 aa5.89□□□□□ -1.47
TOPBP1-210ENST00000572787 TBC1D1Q86TI0 1168 aaPredicted RBP5.89□□□□□ -1.47
TOPBP1-210ENST00000572787 TRIM42Q8IWZ5 723 aa5.89□□□□□ -1.47
TOPBP1-210ENST00000572787 TEX9Q8N6V9 391 aa5.89□□□□□ -1.47
TOPBP1-210ENST00000572787 ZNF713Q8N859 430 aaPredicted RBP5.89□□□□□ -1.47
TOPBP1-210ENST00000572787 LSMEM1Q8N8F7 131 aa5.89□□□□□ -1.47
TOPBP1-210ENST00000572787 ARL10Q8N8L6 244 aa5.89□□□□□ -1.47
TOPBP1-210ENST00000572787 GLIS3Q8NEA6 775 aa5.89□□□□□ -1.47
TOPBP1-210ENST00000572787 ZNF775Q96BV0 537 aaPredicted RBP5.89□□□□□ -1.47
TOPBP1-210ENST00000572787 VMP1Q96GC9 406 aa5.89□□□□□ -1.47
TOPBP1-210ENST00000572787 CCDC138Q96M89 665 aa5.89□□□□□ -1.47
TOPBP1-210ENST00000572787 CENPOQ9BU64 300 aa5.89□□□□□ -1.47
TOPBP1-210ENST00000572787 PRR14Q9BWN1 585 aa5.89□□□□□ -1.47
TOPBP1-210ENST00000572787 CEP44Q9C0F1 390 aa5.89□□□□□ -1.47
TOPBP1-210ENST00000572787 RRN3Q9NYV6 651 aa5.89□□□□□ -1.47
TOPBP1-210ENST00000572787 TMEM63CQ9P1W3 806 aa5.89□□□□□ -1.47
TOPBP1-210ENST00000572787 LRCH1Q9Y2L9 728 aa5.89□□□□□ -1.47
TOPBP1-210ENST00000572787 PTPN22Q9Y2R2 807 aa5.89□□□□□ -1.47
TOPBP1-210ENST00000572787 ANKRD18BA2A2Z9 1011 aa5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 C19orf81C9J6K1 198 aa5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 K7ESF4 209 aa5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 AGRPO00253 132 aa5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 NEMP1O14524 444 aa5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 DNAJC8O75937 253 aaPredicted RBP5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 STAU1O95793 577 aaKnown RBP5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 APBA3O96018 575 aa5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 MYBL2P10244 700 aa5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 BPIP17213 487 aa5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 RHCEP18577 417 aa5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 TFE3P19532 575 aaPredicted RBP5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 HOXD12P35452 270 aa5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 TM4SF4P48230 202 aa5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 FCGRTP55899 365 aa5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 RPS26P62854 115 aaKnown RBP5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 RHDQ02161 417 aa5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 NBPF8Q3BBV2 869 aa5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 RGL3Q3MIN7 710 aa5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 TUBB8Q3ZCM7 444 aa5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 ZC3H12AQ5D1E8 599 aaKnown RBP5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 DNAJC21Q5F1R6 531 aaKnown RBP5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 TLDC1Q6P9B6 456 aa5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 CPLX2Q6PUV4 134 aaKnown RBP5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 CCDC129Q6ZRS4 1044 aa5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 GK5Q6ZS86 529 aa5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 SRGAP1Q7Z6B7 1085 aa5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 TTC6Q86TZ1 520 aa5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 FBXO27Q8NI29 283 aa5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 GATAD2BQ8WXI9 593 aa5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 SMARCC1Q92922 1105 aaPredicted RBP5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 KIFC2Q96AC6 838 aa5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 PLD4Q96BZ4 506 aa5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 HVCN1Q96D96 273 aa5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 SGCZQ96LD1 299 aa5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 LRGUKQ96M69 825 aa5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 SPAG5Q96R06 1193 aa5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 FAM167BQ9BTA0 163 aa5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 CRB3Q9BUF7 120 aa5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 LSM14BQ9BX40 385 aaKnown RBP5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 OXCT2Q9BYC2 517 aaPredicted RBP5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 MRPL9Q9BYD2 267 aaKnown RBP5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 UNC93B1Q9H1C4 597 aa5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 MYLK2Q9H1R3 596 aa5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 OSBPL3Q9H4L5 887 aa5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 ZFYVE1Q9HBF4 777 aa5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 NMRK2Q9NPI5 230 aa5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 ANKEF1Q9NU02 776 aa5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 WBP1LQ9NX94 342 aa5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 PPARGC1AQ9UBK2 798 aaKnown RBP5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 SUCOQ9UBS9 1254 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms