RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 PARP14Q460N5 1801 aa16.98■□□□□ 0.31
NPLOC4-209ENST00000572760 TRPA1O75762 1119 aa16.98■□□□□ 0.31
NPLOC4-209ENST00000572760 HOXA7P31268 230 aaPredicted RBP16.98■□□□□ 0.31
NPLOC4-209ENST00000572760 LIFRP42702 1097 aa16.98■□□□□ 0.31
NPLOC4-209ENST00000572760 IKQ13123 557 aaPredicted RBP16.98■□□□□ 0.31
NPLOC4-209ENST00000572760 COL9A3Q14050 684 aaPredicted RBP16.98■□□□□ 0.31
NPLOC4-209ENST00000572760 CATSPERGQ6ZRH7 1159 aa16.98■□□□□ 0.31
NPLOC4-209ENST00000572760 SMCR8Q8TEV9 937 aaPredicted RBP16.98■□□□□ 0.31
NPLOC4-209ENST00000572760 DCAF4Q8WV16 495 aa16.98■□□□□ 0.31
NPLOC4-209ENST00000572760 NUP88Q99567 741 aaPredicted RBP16.98■□□□□ 0.31
NPLOC4-209ENST00000572760 LY9Q9HBG7 655 aa16.98■□□□□ 0.31
NPLOC4-209ENST00000572760 GPHNQ9NQX3 736 aaPredicted RBP16.98■□□□□ 0.31
NPLOC4-209ENST00000572760 PDRG1Q9NUG6 133 aa16.98■□□□□ 0.31
NPLOC4-209ENST00000572760 RNF186Q9NXI6 227 aa16.98■□□□□ 0.31
NPLOC4-209ENST00000572760 NAP1L2Q9ULW6 460 aaPredicted RBP16.98■□□□□ 0.31
NPLOC4-209ENST00000572760 BAZ2BQ9UIF8 2168 aaKnown RBP16.98■□□□□ 0.31
NPLOC4-209ENST00000572760 FLOT1O75955 427 aa16.97■□□□□ 0.31
NPLOC4-209ENST00000572760 RBM25P49756 843 aaKnown RBP16.97■□□□□ 0.31
NPLOC4-209ENST00000572760 NUP133Q8WUM0 1156 aa16.97■□□□□ 0.31
NPLOC4-209ENST00000572760 GMCL1Q96IK5 515 aa16.97■□□□□ 0.31
NPLOC4-209ENST00000572760 ASCC2Q9H1I8 757 aaPredicted RBP16.97■□□□□ 0.31
NPLOC4-209ENST00000572760 SENP2Q9HC62 589 aa16.97■□□□□ 0.31
NPLOC4-209ENST00000572760 SLC12A7Q9Y666 1083 aa16.97■□□□□ 0.31
NPLOC4-209ENST00000572760 COL11A1P12107 1806 aaPredicted RBP16.96■□□□□ 0.31
NPLOC4-209ENST00000572760 TMEM232C9JQI7 657 aa16.96■□□□□ 0.31
NPLOC4-209ENST00000572760 CA12O43570 354 aa16.96■□□□□ 0.31
NPLOC4-209ENST00000572760 PARP1P09874 1014 aaKnown RBP16.96■□□□□ 0.31
NPLOC4-209ENST00000572760 CYP2C8P10632 490 aa16.96■□□□□ 0.31
NPLOC4-209ENST00000572760 PDHBP11177 359 aa16.96■□□□□ 0.31
NPLOC4-209ENST00000572760 COG2Q14746 738 aa16.96■□□□□ 0.31
NPLOC4-209ENST00000572760 KCTD1Q719H9 257 aa16.96■□□□□ 0.31
NPLOC4-209ENST00000572760 ZNF654Q8IZM8 581 aa16.96■□□□□ 0.31
NPLOC4-209ENST00000572760 JMYQ8N9B5 988 aa16.96■□□□□ 0.31
NPLOC4-209ENST00000572760 GPCPD1Q9NPB8 672 aa16.96■□□□□ 0.31
NPLOC4-209ENST00000572760 HOXC10Q9NYD6 342 aa16.96■□□□□ 0.31
NPLOC4-209ENST00000572760 RLFQ13129 1914 aa16.96■□□□□ 0.3
NPLOC4-209ENST00000572760 FRMPD2Q68DX3 1309 aaPredicted RBP16.96■□□□□ 0.3
NPLOC4-209ENST00000572760 TBC1D8O95759 1140 aa16.95■□□□□ 0.3
NPLOC4-209ENST00000572760 NEK4P51957 841 aa16.95■□□□□ 0.3
NPLOC4-209ENST00000572760 CRHR2Q13324 411 aa16.95■□□□□ 0.3
NPLOC4-209ENST00000572760 CTCFLQ8NI51 663 aaPredicted RBP16.95■□□□□ 0.3
NPLOC4-209ENST00000572760 CHURC1Q8WUH1 139 aa16.95■□□□□ 0.3
NPLOC4-209ENST00000572760 BRF1Q92994 677 aa16.95■□□□□ 0.3
NPLOC4-209ENST00000572760 P2RX7Q99572 595 aaKnown RBP16.95■□□□□ 0.3
NPLOC4-209ENST00000572760 WBP1LQ9NX94 342 aa16.95■□□□□ 0.3
NPLOC4-209ENST00000572760 FEM1BQ9UK73 627 aa16.95■□□□□ 0.3
NPLOC4-209ENST00000572760 CTDP1Q9Y5B0 961 aaPredicted RBP16.95■□□□□ 0.3
NPLOC4-209ENST00000572760 KLF18A0A0U1RQI7 1052 aa16.94■□□□□ 0.3
NPLOC4-209ENST00000572760 DDAH1O94760 285 aa16.94■□□□□ 0.3
NPLOC4-209ENST00000572760 CALM1P0DP23 149 aa16.94■□□□□ 0.3
NPLOC4-209ENST00000572760 CALM2P0DP24 149 aa16.94■□□□□ 0.3
NPLOC4-209ENST00000572760 CALM3P0DP25 149 aa16.94■□□□□ 0.3
NPLOC4-209ENST00000572760 DSG3P32926 999 aa16.94■□□□□ 0.3
NPLOC4-209ENST00000572760 STAT2P52630 851 aa16.94■□□□□ 0.3
NPLOC4-209ENST00000572760 HERVK_113P62684 666 aa16.94■□□□□ 0.3
NPLOC4-209ENST00000572760 ASPRV1Q53RT3 343 aa16.94■□□□□ 0.3
NPLOC4-209ENST00000572760 GPATCH4Q5T3I0 446 aaKnown RBP16.94■□□□□ 0.3
NPLOC4-209ENST00000572760 RASGRP2Q7LDG7 609 aa16.94■□□□□ 0.3
NPLOC4-209ENST00000572760 FAM160B2Q86V87 743 aa16.94■□□□□ 0.3
NPLOC4-209ENST00000572760 SGMS1Q86VZ5 419 aa16.94■□□□□ 0.3
NPLOC4-209ENST00000572760 GTF3C2Q8WUA4 911 aaPredicted RBP16.94■□□□□ 0.3
NPLOC4-209ENST00000572760 IL17RAQ96F46 866 aa16.94■□□□□ 0.3
NPLOC4-209ENST00000572760 TBC1D32Q96NH3 1257 aa16.94■□□□□ 0.3
NPLOC4-209ENST00000572760 SLF1Q9BQI6 1058 aa16.94■□□□□ 0.3
NPLOC4-209ENST00000572760 SAGE1Q9NXZ1 904 aa16.94■□□□□ 0.3
NPLOC4-209ENST00000572760 ZBTB43O43298 467 aa16.93■□□□□ 0.3
NPLOC4-209ENST00000572760 GOLGA8HP0CJ92 632 aa16.93■□□□□ 0.3
NPLOC4-209ENST00000572760 GCLCP48506 637 aaPredicted RBP16.93■□□□□ 0.3
NPLOC4-209ENST00000572760 ZNF543Q08ER8 600 aa16.93■□□□□ 0.3
NPLOC4-209ENST00000572760 APOBRQ0VD83 1088 aa16.93■□□□□ 0.3
NPLOC4-209ENST00000572760 MICU3Q86XE3 530 aa16.93■□□□□ 0.3
NPLOC4-209ENST00000572760 RAB11FIP4Q86YS3 637 aa16.93■□□□□ 0.3
NPLOC4-209ENST00000572760 PRPF38AQ8NAV1 312 aaKnown RBP16.93■□□□□ 0.3
NPLOC4-209ENST00000572760 KIFC2Q96AC6 838 aa16.93■□□□□ 0.3
NPLOC4-209ENST00000572760 PAGR1Q9BTK6 254 aa16.93■□□□□ 0.3
NPLOC4-209ENST00000572760 MYL10Q9BUA6 226 aa16.93■□□□□ 0.3
NPLOC4-209ENST00000572760 FBXO28Q9NVF7 368 aa16.93■□□□□ 0.3
NPLOC4-209ENST00000572760 CASP8AP2Q9UKL3 1982 aa16.92■□□□□ 0.3
NPLOC4-209ENST00000572760 DHX16O60231 1041 aaKnown RBP16.92■□□□□ 0.3
NPLOC4-209ENST00000572760 TLR2O60603 784 aa16.92■□□□□ 0.3
NPLOC4-209ENST00000572760 SNHG28P0DPA3 235 aa16.92■□□□□ 0.3
NPLOC4-209ENST00000572760 KIF5BP33176 963 aa16.92■□□□□ 0.3
NPLOC4-209ENST00000572760 TROAPQ12815 778 aa16.92■□□□□ 0.3
NPLOC4-209ENST00000572760 GRM4Q14833 912 aa16.92■□□□□ 0.3
NPLOC4-209ENST00000572760 RABEP1Q15276 862 aa16.92■□□□□ 0.3
NPLOC4-209ENST00000572760 ANKRD1Q15327 319 aa16.92■□□□□ 0.3
NPLOC4-209ENST00000572760 TTBK2Q6IQ55 1244 aa16.92■□□□□ 0.3
NPLOC4-209ENST00000572760 CCDC144CPQ8IYA2 1237 aa16.92■□□□□ 0.3
NPLOC4-209ENST00000572760 FBXL16Q8N461 479 aa16.92■□□□□ 0.3
NPLOC4-209ENST00000572760 ATG4CQ96DT6 458 aa16.92■□□□□ 0.3
NPLOC4-209ENST00000572760 CPA4Q9UI42 421 aa16.92■□□□□ 0.3
NPLOC4-209ENST00000572760 BRPF3Q9ULD4 1205 aa16.92■□□□□ 0.3
NPLOC4-209ENST00000572760 PPP1R9AQ9ULJ8 1098 aa16.92■□□□□ 0.3
NPLOC4-209ENST00000572760 MYPNQ86TC9 1320 aa16.92■□□□□ 0.3
NPLOC4-209ENST00000572760 MGAMO43451 1857 aa16.91■□□□□ 0.3
NPLOC4-209ENST00000572760 SPDYE16A6NNV3 312 aaPredicted RBP16.91■□□□□ 0.3
NPLOC4-209ENST00000572760 ZBED4O75132 1171 aa16.91■□□□□ 0.3
NPLOC4-209ENST00000572760 HSPA1AP0DMV8 641 aaKnown RBP16.91■□□□□ 0.3
NPLOC4-209ENST00000572760 HSPA1BP0DMV9 641 aaKnown RBP16.91■□□□□ 0.3
NPLOC4-209ENST00000572760 RXRAP19793 462 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms