RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 SEC24BO95487 1268 aa8.24□□□□□ -1.09
SMG6-209ENST00000571442 PCP11498 1178 aaKnown RBP8.24□□□□□ -1.09
SMG6-209ENST00000571442 MCCP23508 829 aa8.24□□□□□ -1.09
SMG6-209ENST00000571442 DSG3P32926 999 aa8.24□□□□□ -1.09
SMG6-209ENST00000571442 PSMC4P43686 418 aa8.24□□□□□ -1.09
SMG6-209ENST00000571442 RGS19P49795 217 aa8.24□□□□□ -1.09
SMG6-209ENST00000571442 SOX10P56693 466 aa8.24□□□□□ -1.09
SMG6-209ENST00000571442 SNAP25P60880 206 aa8.24□□□□□ -1.09
SMG6-209ENST00000571442 FAM110CQ1W6H9 321 aa8.24□□□□□ -1.09
SMG6-209ENST00000571442 SAMD1Q6SPF0 538 aaPredicted RBP8.24□□□□□ -1.09
SMG6-209ENST00000571442 LBX2Q6XYB7 198 aa8.24□□□□□ -1.09
SMG6-209ENST00000571442 KIAA1211Q6ZU35 1233 aa8.24□□□□□ -1.09
SMG6-209ENST00000571442 KCTD1Q719H9 257 aa8.24□□□□□ -1.09
SMG6-209ENST00000571442 GMCL1P1Q8NEA9 526 aa8.24□□□□□ -1.09
SMG6-209ENST00000571442 ANKS1AQ92625 1134 aa8.24□□□□□ -1.09
SMG6-209ENST00000571442 LPAR1Q92633 364 aa8.24□□□□□ -1.09
SMG6-209ENST00000571442 ESR2Q92731 530 aa8.24□□□□□ -1.09
SMG6-209ENST00000571442 ZSCAN10Q96SZ4 725 aaPredicted RBP8.24□□□□□ -1.09
SMG6-209ENST00000571442 CPVLQ9H3G5 476 aa8.24□□□□□ -1.09
SMG6-209ENST00000571442 EFCC1Q9HA90 598 aa8.24□□□□□ -1.09
SMG6-209ENST00000571442 GOPCQ9HD26 462 aa8.24□□□□□ -1.09
SMG6-209ENST00000571442 PNMA3Q9UL41 463 aa8.24□□□□□ -1.09
SMG6-209ENST00000571442 ADAMTS5Q9UNA0 930 aa8.24□□□□□ -1.09
SMG6-209ENST00000571442 GTF3C3Q9Y5Q9 886 aa8.24□□□□□ -1.09
SMG6-209ENST00000571442 TNKSO95271 1327 aa8.24□□□□□ -1.09
SMG6-209ENST00000571442 FRMPD2Q68DX3 1309 aaPredicted RBP8.24□□□□□ -1.09
SMG6-209ENST00000571442 TNRC18O15417 2968 aaPredicted RBP8.23□□□□□ -1.09
SMG6-209ENST00000571442 PDHBP11177 359 aa8.23□□□□□ -1.09
SMG6-209ENST00000571442 TOP1P11387 765 aaKnown RBP8.23□□□□□ -1.09
SMG6-209ENST00000571442 CPA1P15085 419 aa8.23□□□□□ -1.09
SMG6-209ENST00000571442 HSPA4P34932 840 aa8.23□□□□□ -1.09
SMG6-209ENST00000571442 GCLCP48506 637 aaPredicted RBP8.23□□□□□ -1.09
SMG6-209ENST00000571442 ERVK-9P63128 1117 aa8.23□□□□□ -1.09
SMG6-209ENST00000571442 ERVK-24P63145 666 aa8.23□□□□□ -1.09
SMG6-209ENST00000571442 PABPC4Q13310 644 aaKnown RBP eCLIP8.23□□□□□ -1.09
SMG6-209ENST00000571442 COG2Q14746 738 aa8.23□□□□□ -1.09
SMG6-209ENST00000571442 TMEM132BQ14DG7 1078 aa8.23□□□□□ -1.09
SMG6-209ENST00000571442 SLC35G1Q2M3R5 365 aa8.23□□□□□ -1.09
SMG6-209ENST00000571442 KCNB2Q92953 911 aa8.23□□□□□ -1.09
SMG6-209ENST00000571442 ERO1AQ96HE7 468 aa8.23□□□□□ -1.09
SMG6-209ENST00000571442 TCEANC2Q96MN5 208 aa8.23□□□□□ -1.09
SMG6-209ENST00000571442 USP26Q9BXU7 913 aa8.23□□□□□ -1.09
SMG6-209ENST00000571442 LRRC2Q9BYS8 371 aa8.23□□□□□ -1.09
SMG6-209ENST00000571442 KRT23Q9C075 422 aa8.23□□□□□ -1.09
SMG6-209ENST00000571442 SH2D4AQ9H788 454 aa8.23□□□□□ -1.09
SMG6-209ENST00000571442 PPP1R9AQ9ULJ8 1098 aa8.23□□□□□ -1.09
SMG6-209ENST00000571442 PTCH2Q9Y6C5 1203 aa8.23□□□□□ -1.09
SMG6-209ENST00000571442 TMEM232C9JQI7 657 aa8.22□□□□□ -1.09
SMG6-209ENST00000571442 VWA5AO00534 786 aa8.22□□□□□ -1.09
SMG6-209ENST00000571442 GOLGA8HP0CJ92 632 aa8.22□□□□□ -1.09
SMG6-209ENST00000571442 SNHG28P0DPA3 235 aa8.22□□□□□ -1.09
SMG6-209ENST00000571442 BMP3P12645 472 aa8.22□□□□□ -1.09
SMG6-209ENST00000571442 SLC16A2P36021 539 aa8.22□□□□□ -1.09
SMG6-209ENST00000571442 PRKCZQ05513 592 aa8.22□□□□□ -1.09
SMG6-209ENST00000571442 C8orf34Q49A92 452 aa8.22□□□□□ -1.09
SMG6-209ENST00000571442 CASC1Q6TDU7 716 aa8.22□□□□□ -1.09
SMG6-209ENST00000571442 DGKHQ86XP1 1220 aa8.22□□□□□ -1.09
SMG6-209ENST00000571442 GPRC5AQ8NFJ5 357 aa8.22□□□□□ -1.09
SMG6-209ENST00000571442 NCOA7Q8NI08 942 aa8.22□□□□□ -1.09
SMG6-209ENST00000571442 IGDCC4Q8TDY8 1250 aa8.22□□□□□ -1.09
SMG6-209ENST00000571442 GMCL1Q96IK5 515 aa8.22□□□□□ -1.09
SMG6-209ENST00000571442 SLF1Q9BQI6 1058 aa8.22□□□□□ -1.09
SMG6-209ENST00000571442 MOV10L1Q9BXT6 1211 aaKnown RBP8.22□□□□□ -1.09
SMG6-209ENST00000571442 CNNM2Q9H8M5 875 aa8.22□□□□□ -1.09
SMG6-209ENST00000571442 GPCPD1Q9NPB8 672 aa8.22□□□□□ -1.09
SMG6-209ENST00000571442 GJD2Q9UKL4 321 aa8.22□□□□□ -1.09
SMG6-209ENST00000571442 SYNPO2Q9UMS6 1093 aa8.22□□□□□ -1.09
SMG6-209ENST00000571442 PTPN22Q9Y2R2 807 aa8.22□□□□□ -1.09
SMG6-209ENST00000571442 RABGAP1Q9Y3P9 1069 aa8.22□□□□□ -1.09
SMG6-209ENST00000571442 RIPK3Q9Y572 518 aa8.22□□□□□ -1.09
SMG6-209ENST00000571442 SNX14Q9Y5W7 946 aa8.22□□□□□ -1.09
SMG6-209ENST00000571442 ZNFX1Q9P2E3 1918 aaKnown RBP8.22□□□□□ -1.09
SMG6-209ENST00000571442 ZNF536O15090 1300 aa8.22□□□□□ -1.09
SMG6-209ENST00000571442 CENPFP49454 3210 aa8.22□□□□□ -1.09
SMG6-209ENST00000571442 SH2B2O14492 632 aaPredicted RBP8.21□□□□□ -1.1
SMG6-209ENST00000571442 PRC1O43663 620 aa8.21□□□□□ -1.1
SMG6-209ENST00000571442 FMNL1O95466 1100 aaPredicted RBP8.21□□□□□ -1.1
SMG6-209ENST00000571442 SLC1A4P43007 532 aa8.21□□□□□ -1.1
SMG6-209ENST00000571442 ZNF543Q08ER8 600 aa8.21□□□□□ -1.1
SMG6-209ENST00000571442 TSGA10IPQ3SY00 556 aa8.21□□□□□ -1.1
SMG6-209ENST00000571442 GPR142Q7Z601 462 aa8.21□□□□□ -1.1
SMG6-209ENST00000571442 IQCA1Q86XH1 822 aa8.21□□□□□ -1.1
SMG6-209ENST00000571442 RAB11FIP4Q86YS3 637 aa8.21□□□□□ -1.1
SMG6-209ENST00000571442 STAG2Q8N3U4 1231 aa8.21□□□□□ -1.1
SMG6-209ENST00000571442 PNMA1Q8ND90 353 aa8.21□□□□□ -1.1
SMG6-209ENST00000571442 KIFC2Q96AC6 838 aa8.21□□□□□ -1.1
SMG6-209ENST00000571442 TTC14Q96N46 770 aa8.21□□□□□ -1.1
SMG6-209ENST00000571442 MYL10Q9BUA6 226 aa8.21□□□□□ -1.1
SMG6-209ENST00000571442 SPATC1LQ9H0A9 340 aa8.21□□□□□ -1.1
SMG6-209ENST00000571442 LY9Q9HBG7 655 aa8.21□□□□□ -1.1
SMG6-209ENST00000571442 RAVER2Q9HCJ3 691 aaKnown RBP8.21□□□□□ -1.1
SMG6-209ENST00000571442 SRRDQ9UH36 339 aa8.21□□□□□ -1.1
SMG6-209ENST00000571442 ZNF214Q9UL59 606 aaPredicted RBP8.21□□□□□ -1.1
SMG6-209ENST00000571442 PRR12Q9ULL5 1215 aa8.21□□□□□ -1.1
SMG6-209ENST00000571442 HPS5Q9UPZ3 1129 aa8.21□□□□□ -1.1
SMG6-209ENST00000571442 MYPNQ86TC9 1320 aa8.21□□□□□ -1.1
SMG6-209ENST00000571442 BAZ2BQ9UIF8 2168 aaKnown RBP8.21□□□□□ -1.1
SMG6-209ENST00000571442 LCTP09848 1927 aa8.21□□□□□ -1.1
SMG6-209ENST00000571442 KIAA0100Q14667 2235 aaKnown RBP8.21□□□□□ -1.1
SMG6-209ENST00000571442 TNPO2O14787 897 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms