RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 ETF1P62495 437 aaKnown RBP7.22□□□□□ -1.25
KARSP3-201ENST00000571212 KCT2Q8NC54 265 aa7.22□□□□□ -1.25
KARSP3-201ENST00000571212 LRRN4CLQ8ND94 238 aa7.22□□□□□ -1.25
KARSP3-201ENST00000571212 XAGE3Q8WTP9 111 aa7.22□□□□□ -1.25
KARSP3-201ENST00000571212 FAM161BQ96MY7 647 aa7.22□□□□□ -1.25
KARSP3-201ENST00000571212 ADGRB3O60242 1522 aa7.22□□□□□ -1.25
KARSP3-201ENST00000571212 GRK4P32298 578 aa7.22□□□□□ -1.25
KARSP3-201ENST00000571212 HOMEZQ8IX15 550 aa7.22□□□□□ -1.25
KARSP3-201ENST00000571212 SLC26A8Q96RN1 970 aa7.22□□□□□ -1.25
KARSP3-201ENST00000571212 MIPEPQ99797 713 aa7.22□□□□□ -1.25
KARSP3-201ENST00000571212 FOXQ1Q9C009 403 aa7.22□□□□□ -1.25
KARSP3-201ENST00000571212 SLC52A1Q9NWF4 448 aa7.22□□□□□ -1.25
KARSP3-201ENST00000571212 CHD2O14647 1828 aaKnown RBP7.21□□□□□ -1.25
KARSP3-201ENST00000571212 FGD6Q6ZV73 1430 aa7.21□□□□□ -1.26
KARSP3-201ENST00000571212 MYO5BQ9ULV0 1848 aa7.21□□□□□ -1.26
KARSP3-201ENST00000571212 LIG3P49916 1009 aa7.21□□□□□ -1.26
KARSP3-201ENST00000571212 ANGEL2Q5VTE6 544 aaKnown RBP7.21□□□□□ -1.26
KARSP3-201ENST00000571212 KRTAP9-9Q9BYP9 154 aa7.21□□□□□ -1.26
KARSP3-201ENST00000571212 KRTAP9-4Q9BYQ2 154 aa7.21□□□□□ -1.26
KARSP3-201ENST00000571212 PRDM5Q9NQX1 630 aaPredicted RBP7.21□□□□□ -1.26
KARSP3-201ENST00000571212 TLR6Q9Y2C9 796 aa7.21□□□□□ -1.26
KARSP3-201ENST00000571212 SNX11Q9Y5W9 270 aa7.21□□□□□ -1.26
KARSP3-201ENST00000571212 SNCAIPQ9Y6H5 919 aa7.21□□□□□ -1.26
KARSP3-201ENST00000571212 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.21□□□□□ -1.26
KARSP3-201ENST00000571212 PHLPP1O60346 1717 aa7.21□□□□□ -1.26
KARSP3-201ENST00000571212 MSH6P52701 1360 aa7.2□□□□□ -1.26
KARSP3-201ENST00000571212 GNAT3A8MTJ3 354 aa7.2□□□□□ -1.26
KARSP3-201ENST00000571212 F6X3S4 739 aa7.2□□□□□ -1.26
KARSP3-201ENST00000571212 GFRA2O00451 464 aa7.2□□□□□ -1.26
KARSP3-201ENST00000571212 TFE3P19532 575 aaPredicted RBP7.2□□□□□ -1.26
KARSP3-201ENST00000571212 TAGLNQ01995 201 aaKnown RBP7.2□□□□□ -1.26
KARSP3-201ENST00000571212 IKZF1Q13422 519 aa7.2□□□□□ -1.26
KARSP3-201ENST00000571212 AGMOQ6ZNB7 445 aa7.2□□□□□ -1.26
KARSP3-201ENST00000571212 NPAS4Q8IUM7 802 aa7.2□□□□□ -1.26
KARSP3-201ENST00000571212 TPX2Q9ULW0 747 aaKnown RBP7.2□□□□□ -1.26
KARSP3-201ENST00000571212 RPRD2Q5VT52 1461 aaKnown RBP7.2□□□□□ -1.26
KARSP3-201ENST00000571212 ADGRL2O95490 1459 aa7.19□□□□□ -1.26
KARSP3-201ENST00000571212 PDIA4P13667 645 aaKnown RBP7.19□□□□□ -1.26
KARSP3-201ENST00000571212 LMNB1P20700 586 aa7.19□□□□□ -1.26
KARSP3-201ENST00000571212 RPS26P62854 115 aaKnown RBP7.19□□□□□ -1.26
KARSP3-201ENST00000571212 PRAMEF13Q5VWM6 474 aa7.19□□□□□ -1.26
KARSP3-201ENST00000571212 DNAJC14Q6Y2X3 702 aaPredicted RBP7.19□□□□□ -1.26
KARSP3-201ENST00000571212 DPH2Q9BQC3 489 aaPredicted RBP7.19□□□□□ -1.26
KARSP3-201ENST00000571212 RRBP1Q9P2E9 1410 aaKnown RBP7.19□□□□□ -1.26
KARSP3-201ENST00000571212 JCADQ9P266 1359 aa7.19□□□□□ -1.26
KARSP3-201ENST00000571212 PLEKHG1Q9ULL1 1385 aa7.19□□□□□ -1.26
KARSP3-201ENST00000571212 GCC2Q8IWJ2 1684 aa7.19□□□□□ -1.26
KARSP3-201ENST00000571212 CTSHP09668 335 aa7.18□□□□□ -1.26
KARSP3-201ENST00000571212 FGD1P98174 961 aa7.18□□□□□ -1.26
KARSP3-201ENST00000571212 ZP2Q05996 745 aa7.18□□□□□ -1.26
KARSP3-201ENST00000571212 PSMD2Q13200 908 aa7.18□□□□□ -1.26
KARSP3-201ENST00000571212 CDKAL1Q5VV42 579 aa7.18□□□□□ -1.26
KARSP3-201ENST00000571212 ATG4DQ86TL0 474 aaPredicted RBP7.18□□□□□ -1.26
KARSP3-201ENST00000571212 HID1Q8IV36 788 aa7.18□□□□□ -1.26
KARSP3-201ENST00000571212 ASB11Q8WXH4 323 aa7.18□□□□□ -1.26
KARSP3-201ENST00000571212 JARID2Q92833 1246 aaPredicted RBP7.18□□□□□ -1.26
KARSP3-201ENST00000571212 HSPA12BQ96MM6 686 aa7.18□□□□□ -1.26
KARSP3-201ENST00000571212 MAPK8IP1Q9UQF2 711 aa7.18□□□□□ -1.26
KARSP3-201ENST00000571212 ZFYVE9O95405 1425 aa7.18□□□□□ -1.26
KARSP3-201ENST00000571212 NCOA3Q9Y6Q9 1424 aa7.18□□□□□ -1.26
KARSP3-201ENST00000571212 TMEM131LA2VDJ0 1609 aa7.18□□□□□ -1.26
KARSP3-201ENST00000571212 PITPNM2Q9BZ72 1349 aa7.18□□□□□ -1.26
KARSP3-201ENST00000571212 RIMS2Q9UQ26 1411 aa7.17□□□□□ -1.26
KARSP3-201ENST00000571212 BIN1O00499 593 aa7.17□□□□□ -1.26
KARSP3-201ENST00000571212 YBX3P16989 372 aaKnown RBP eCLIP7.17□□□□□ -1.26
KARSP3-201ENST00000571212 DAB2P98082 770 aa7.17□□□□□ -1.26
KARSP3-201ENST00000571212 LETMD1Q6P1Q0 360 aa7.17□□□□□ -1.26
KARSP3-201ENST00000571212 SLC23A3Q6PIS1 610 aa7.17□□□□□ -1.26
KARSP3-201ENST00000571212 CDH24Q86UP0 819 aa7.17□□□□□ -1.26
KARSP3-201ENST00000571212 MIR1-1HGQ9H1L0 117 aa7.17□□□□□ -1.26
KARSP3-201ENST00000571212 ATP13A1Q9HD20 1204 aa7.17□□□□□ -1.26
KARSP3-201ENST00000571212 TBX22Q9Y458 520 aa7.17□□□□□ -1.26
KARSP3-201ENST00000571212 COL16A1Q07092 1604 aaPredicted RBP7.17□□□□□ -1.26
KARSP3-201ENST00000571212 SETD1AO15047 1707 aaKnown RBP7.17□□□□□ -1.26
KARSP3-201ENST00000571212 ANKRD50Q9ULJ7 1429 aa7.17□□□□□ -1.26
KARSP3-201ENST00000571212 CBX7O95931 251 aa7.17□□□□□ -1.26
KARSP3-201ENST00000571212 CAP2P40123 477 aa7.17□□□□□ -1.26
KARSP3-201ENST00000571212 SFRP5Q5T4F7 317 aa7.17□□□□□ -1.26
KARSP3-201ENST00000571212 MFSD2AQ8NA29 543 aa7.17□□□□□ -1.26
KARSP3-201ENST00000571212 FAM168AQ92567 244 aa7.17□□□□□ -1.26
KARSP3-201ENST00000571212 SEMA3GQ9NS98 782 aa7.17□□□□□ -1.26
KARSP3-201ENST00000571212 TJP2Q9UDY2 1190 aa7.17□□□□□ -1.26
KARSP3-201ENST00000571212 FAM155AB1AL88 458 aaPredicted RBP7.16□□□□□ -1.26
KARSP3-201ENST00000571212 CST3P01034 146 aaPredicted RBP7.16□□□□□ -1.26
KARSP3-201ENST00000571212 PGRP06401 933 aa7.16□□□□□ -1.26
KARSP3-201ENST00000571212 TAF1CQ15572 869 aaPredicted RBP7.16□□□□□ -1.26
KARSP3-201ENST00000571212 POU5F2Q8N7G0 328 aa7.16□□□□□ -1.26
KARSP3-201ENST00000571212 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.16□□□□□ -1.26
KARSP3-201ENST00000571212 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.16□□□□□ -1.26
KARSP3-201ENST00000571212 DIP2AQ14689 1571 aa7.15□□□□□ -1.26
KARSP3-201ENST00000571212 SPATA31A6Q5VVP1 1343 aa7.15□□□□□ -1.26
KARSP3-201ENST00000571212 AHDC1Q5TGY3 1603 aaPredicted RBP7.15□□□□□ -1.26
KARSP3-201ENST00000571212 H3BS24 57 aa7.15□□□□□ -1.27
KARSP3-201ENST00000571212 C8AP07357 584 aa7.15□□□□□ -1.27
KARSP3-201ENST00000571212 ZNF865P0CJ78 1059 aaPredicted RBP7.15□□□□□ -1.27
KARSP3-201ENST00000571212 CLCN7P51798 805 aa7.15□□□□□ -1.27
KARSP3-201ENST00000571212 XPCQ01831 940 aaPredicted RBP7.15□□□□□ -1.27
KARSP3-201ENST00000571212 ZNF648Q5T619 568 aaPredicted RBP7.15□□□□□ -1.27
KARSP3-201ENST00000571212 MFSD4AQ8N468 514 aa7.15□□□□□ -1.27
KARSP3-201ENST00000571212 CARS2Q9HA77 564 aaKnown RBP7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms