RNA–Protein interactions for RNA: ENST00000570623.1

TOM1L1-206, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1L1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-206ENST00000570623 RNF4P78317 190 aa7.43□□□□□ -1.22
TOM1L1-206ENST00000570623 HSP90AA2PQ14568 343 aaPredicted RBP7.43□□□□□ -1.22
TOM1L1-206ENST00000570623 ANKRD39Q53RE8 183 aa7.43□□□□□ -1.22
TOM1L1-206ENST00000570623 PPP1R13LQ8WUF5 828 aa7.43□□□□□ -1.22
TOM1L1-206ENST00000570623 ARHGEF4Q9NR80 690 aa7.43□□□□□ -1.22
TOM1L1-206ENST00000570623 NOP53Q9NZM5 478 aaKnown RBP7.43□□□□□ -1.22
TOM1L1-206ENST00000570623 GAPVD1Q14C86 1478 aa7.43□□□□□ -1.22
TOM1L1-206ENST00000570623 TRAV20A0A0B4J274 112 aa7.42□□□□□ -1.22
TOM1L1-206ENST00000570623 FAM229AH3BQW9 127 aa7.42□□□□□ -1.22
TOM1L1-206ENST00000570623 RFPL3O75679 317 aa7.42□□□□□ -1.22
TOM1L1-206ENST00000570623 AMPD3Q01432 767 aa7.42□□□□□ -1.22
TOM1L1-206ENST00000570623 NBPF12Q5TAG4 269 aaPredicted RBP7.42□□□□□ -1.22
TOM1L1-206ENST00000570623 FOXB2Q5VYV0 432 aa7.42□□□□□ -1.22
TOM1L1-206ENST00000570623 DCAF15Q66K64 600 aa7.42□□□□□ -1.22
TOM1L1-206ENST00000570623 KRT26Q7Z3Y9 468 aa7.42□□□□□ -1.22
TOM1L1-206ENST00000570623 ZNF227Q86WZ6 799 aa7.42□□□□□ -1.22
TOM1L1-206ENST00000570623 AGGF1Q8N302 714 aaeCLIP7.42□□□□□ -1.22
TOM1L1-206ENST00000570623 DNAJB8Q8NHS0 232 aa7.42□□□□□ -1.22
TOM1L1-206ENST00000570623 XAGE3Q8WTP9 111 aa7.42□□□□□ -1.22
TOM1L1-206ENST00000570623 NINJ1Q92982 152 aa7.42□□□□□ -1.22
TOM1L1-206ENST00000570623 KISS1RQ969F8 398 aaPredicted RBP7.42□□□□□ -1.22
TOM1L1-206ENST00000570623 MFSD3Q96ES6 412 aa7.42□□□□□ -1.22
TOM1L1-206ENST00000570623 EXOC2Q96KP1 924 aa7.42□□□□□ -1.22
TOM1L1-206ENST00000570623 CDC6Q99741 560 aa7.42□□□□□ -1.22
TOM1L1-206ENST00000570623 AARSD1Q9BTE6 412 aaKnown RBP7.42□□□□□ -1.22
TOM1L1-206ENST00000570623 DHRS4Q9BTZ2 278 aa7.42□□□□□ -1.22
TOM1L1-206ENST00000570623 CEP41Q9BYV8 373 aa7.42□□□□□ -1.22
TOM1L1-206ENST00000570623 MKRN2Q9H000 416 aaKnown RBP7.42□□□□□ -1.22
TOM1L1-206ENST00000570623 ACSS3Q9H6R3 686 aa7.42□□□□□ -1.22
TOM1L1-206ENST00000570623 LRP2BPQ9P2M1 347 aa7.42□□□□□ -1.22
TOM1L1-206ENST00000570623 CEP131Q9UPN4 1083 aa7.42□□□□□ -1.22
TOM1L1-206ENST00000570623 ITGAVP06756 1048 aa7.41□□□□□ -1.22
TOM1L1-206ENST00000570623 PREPP48147 710 aa7.41□□□□□ -1.22
TOM1L1-206ENST00000570623 PPP2R2AP63151 447 aa7.41□□□□□ -1.22
TOM1L1-206ENST00000570623 TM4SF20Q53R12 229 aa7.41□□□□□ -1.22
TOM1L1-206ENST00000570623 ZMYM1Q5SVZ6 1142 aa7.41□□□□□ -1.22
TOM1L1-206ENST00000570623 Q6ZS46 218 aa7.41□□□□□ -1.22
TOM1L1-206ENST00000570623 NIM1KQ8IY84 436 aa7.41□□□□□ -1.22
TOM1L1-206ENST00000570623 ZNF513Q8N8E2 541 aaPredicted RBP7.41□□□□□ -1.22
TOM1L1-206ENST00000570623 ZNF512BQ96KM6 892 aaPredicted RBP7.41□□□□□ -1.22
TOM1L1-206ENST00000570623 IPO9Q96P70 1041 aaKnown RBP7.41□□□□□ -1.22
TOM1L1-206ENST00000570623 NCOA5Q9HCD5 579 aaKnown RBP7.41□□□□□ -1.22
TOM1L1-206ENST00000570623 WHRNQ9P202 907 aa7.41□□□□□ -1.22
TOM1L1-206ENST00000570623 APEX2Q9UBZ4 518 aa7.41□□□□□ -1.22
TOM1L1-206ENST00000570623 SYNJ1O43426 1573 aa7.41□□□□□ -1.22
TOM1L1-206ENST00000570623 PLD2O14939 933 aa7.4□□□□□ -1.22
TOM1L1-206ENST00000570623 GAS2O43903 313 aaKnown RBP7.4□□□□□ -1.22
TOM1L1-206ENST00000570623 PPM1BO75688 479 aa7.4□□□□□ -1.22
TOM1L1-206ENST00000570623 FGFR1P11362 822 aa7.4□□□□□ -1.22
TOM1L1-206ENST00000570623 RAB6AP20340 208 aa7.4□□□□□ -1.22
TOM1L1-206ENST00000570623 L1CAMP32004 1257 aa7.4□□□□□ -1.22
TOM1L1-206ENST00000570623 PABPC4Q13310 644 aaKnown RBP eCLIP7.4□□□□□ -1.22
TOM1L1-206ENST00000570623 LETMD1Q6P1Q0 360 aa7.4□□□□□ -1.22
TOM1L1-206ENST00000570623 ADAT2Q7Z6V5 191 aaKnown RBP7.4□□□□□ -1.22
TOM1L1-206ENST00000570623 SCUBE1Q8IWY4 988 aa7.4□□□□□ -1.22
TOM1L1-206ENST00000570623 C7orf61Q8IZ16 206 aa7.4□□□□□ -1.22
TOM1L1-206ENST00000570623 RPUSD2Q8IZ73 545 aaKnown RBP7.4□□□□□ -1.22
TOM1L1-206ENST00000570623 LRRN4CLQ8ND94 238 aa7.4□□□□□ -1.22
TOM1L1-206ENST00000570623 PPP1R14AQ96A00 147 aa7.4□□□□□ -1.22
TOM1L1-206ENST00000570623 VWCEQ96DN2 955 aa7.4□□□□□ -1.22
TOM1L1-206ENST00000570623 FGD4Q96M96 766 aa7.4□□□□□ -1.22
TOM1L1-206ENST00000570623 KREMEN1Q96MU8 473 aa7.4□□□□□ -1.22
TOM1L1-206ENST00000570623 YIPF2Q9BWQ6 316 aa7.4□□□□□ -1.22
TOM1L1-206ENST00000570623 ASPNQ9BXN1 380 aa7.4□□□□□ -1.22
TOM1L1-206ENST00000570623 AKTIPQ9H8T0 292 aa7.4□□□□□ -1.22
TOM1L1-206ENST00000570623 METTL14Q9HCE5 456 aaKnown RBP7.4□□□□□ -1.22
TOM1L1-206ENST00000570623 MRPS23Q9Y3D9 190 aaKnown RBP7.4□□□□□ -1.22
TOM1L1-206ENST00000570623 COL17A1Q9UMD9 1497 aaPredicted RBP7.4□□□□□ -1.22
TOM1L1-206ENST00000570623 TRBV23-1A0A0A0MS06 115 aa7.39□□□□□ -1.23
TOM1L1-206ENST00000570623 SHOXO15266 292 aa7.39□□□□□ -1.23
TOM1L1-206ENST00000570623 SART1O43290 800 aaKnown RBP7.39□□□□□ -1.23
TOM1L1-206ENST00000570623 CD247P20963 164 aa7.39□□□□□ -1.23
TOM1L1-206ENST00000570623 ETV3P41162 512 aa7.39□□□□□ -1.23
TOM1L1-206ENST00000570623 USP11P51784 963 aa7.39□□□□□ -1.23
TOM1L1-206ENST00000570623 AUHQ13825 339 aaKnown RBP7.39□□□□□ -1.23
TOM1L1-206ENST00000570623 FNDC3BQ53EP0 1204 aaKnown RBP7.39□□□□□ -1.23
TOM1L1-206ENST00000570623 FAM209AQ5JX71 171 aa7.39□□□□□ -1.23
TOM1L1-206ENST00000570623 SHISA2Q6UWI4 295 aa7.39□□□□□ -1.23
TOM1L1-206ENST00000570623 BVESQ8NE79 360 aa7.39□□□□□ -1.23
TOM1L1-206ENST00000570623 RNF141Q8WVD5 230 aa7.39□□□□□ -1.23
TOM1L1-206ENST00000570623 LENG1Q96BZ8 264 aaPredicted RBP7.39□□□□□ -1.23
TOM1L1-206ENST00000570623 RCC1LQ96I51 464 aaKnown RBP7.39□□□□□ -1.23
TOM1L1-206ENST00000570623 MIPEPQ99797 713 aa7.39□□□□□ -1.23
TOM1L1-206ENST00000570623 MRPL4Q9BYD3 311 aaKnown RBP7.39□□□□□ -1.23
TOM1L1-206ENST00000570623 SUGT1Q9Y2Z0 365 aa7.39□□□□□ -1.23
TOM1L1-206ENST00000570623 ZNF451Q9Y4E5 1061 aa7.39□□□□□ -1.23
TOM1L1-206ENST00000570623 A0A087WZG4 1122 aa7.38□□□□□ -1.23
TOM1L1-206ENST00000570623 NOP56O00567 594 aaKnown RBP7.38□□□□□ -1.23
TOM1L1-206ENST00000570623 CAPNS1P04632 268 aa7.38□□□□□ -1.23
TOM1L1-206ENST00000570623 SPATA31C1P0DKV0 1188 aa7.38□□□□□ -1.23
TOM1L1-206ENST00000570623 ITGA4P13612 1032 aa7.38□□□□□ -1.23
TOM1L1-206ENST00000570623 SUMO1P63165 101 aaKnown RBP7.38□□□□□ -1.23
TOM1L1-206ENST00000570623 CBX2Q14781 532 aaPredicted RBP7.38□□□□□ -1.23
TOM1L1-206ENST00000570623 C21orf62-AS1Q17RA5 79 aa7.38□□□□□ -1.23
TOM1L1-206ENST00000570623 LCE3BQ5TA77 95 aa7.38□□□□□ -1.23
TOM1L1-206ENST00000570623 YOD1Q5VVQ6 348 aaPredicted RBP7.38□□□□□ -1.23
TOM1L1-206ENST00000570623 POMZP3Q6PJE2 187 aa7.38□□□□□ -1.23
TOM1L1-206ENST00000570623 DHX37Q8IY37 1157 aaKnown RBP7.38□□□□□ -1.23
TOM1L1-206ENST00000570623 CRACR2BQ8N4Y2 399 aaPredicted RBP7.38□□□□□ -1.23
TOM1L1-206ENST00000570623 FBXL18Q96ME1 805 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms