RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 CHMP4BQ9H444 224 aaKnown RBP10.34□□□□□ -0.75
CTDNEP1-203ENST00000570385 MROH8Q9H579 483 aa10.34□□□□□ -0.75
CTDNEP1-203ENST00000570385 SH2D4AQ9H788 454 aa10.34□□□□□ -0.75
CTDNEP1-203ENST00000570385 ECHDC1Q9NTX5 307 aa10.34□□□□□ -0.75
CTDNEP1-203ENST00000570385 ATP11BQ9Y2G3 1177 aa10.34□□□□□ -0.75
CTDNEP1-203ENST00000570385 FRMPD3Q5JV73 1810 aa10.34□□□□□ -0.75
CTDNEP1-203ENST00000570385 ZNFX1Q9P2E3 1918 aaKnown RBP10.33□□□□□ -0.76
CTDNEP1-203ENST00000570385 WDR46O15213 610 aaKnown RBP10.33□□□□□ -0.76
CTDNEP1-203ENST00000570385 LRIT3Q3SXY7 679 aa10.33□□□□□ -0.76
CTDNEP1-203ENST00000570385 ZSCAN25Q6NSZ9 544 aa10.33□□□□□ -0.76
CTDNEP1-203ENST00000570385 ARRDC4Q8NCT1 418 aa10.33□□□□□ -0.76
CTDNEP1-203ENST00000570385 MAML3Q96JK9 1138 aa10.33□□□□□ -0.76
CTDNEP1-203ENST00000570385 STRBPQ96SI9 672 aaKnown RBP10.33□□□□□ -0.76
CTDNEP1-203ENST00000570385 MMP19Q99542 508 aa10.33□□□□□ -0.76
CTDNEP1-203ENST00000570385 KANSL2Q9H9L4 492 aa10.33□□□□□ -0.76
CTDNEP1-203ENST00000570385 GOPCQ9HD26 462 aa10.33□□□□□ -0.76
CTDNEP1-203ENST00000570385 PRDM5Q9NQX1 630 aaPredicted RBP10.33□□□□□ -0.76
CTDNEP1-203ENST00000570385 SLC5A4Q9NY91 659 aa10.33□□□□□ -0.76
CTDNEP1-203ENST00000570385 MYH7P12883 1935 aa10.33□□□□□ -0.76
CTDNEP1-203ENST00000570385 GSG1L2A8MUP6 293 aa10.32□□□□□ -0.76
CTDNEP1-203ENST00000570385 KBTBD13C9JR72 458 aa10.32□□□□□ -0.76
CTDNEP1-203ENST00000570385 VWA5AO00534 786 aa10.32□□□□□ -0.76
CTDNEP1-203ENST00000570385 SEPT4O43236 478 aa10.32□□□□□ -0.76
CTDNEP1-203ENST00000570385 PRDM1O75626 825 aa10.32□□□□□ -0.76
CTDNEP1-203ENST00000570385 APPP05067 770 aa10.32□□□□□ -0.76
CTDNEP1-203ENST00000570385 TAL1P17542 331 aaPredicted RBP10.32□□□□□ -0.76
CTDNEP1-203ENST00000570385 STAT3P40763 770 aa10.32□□□□□ -0.76
CTDNEP1-203ENST00000570385 ADCYAP1R1P41586 468 aa10.32□□□□□ -0.76
CTDNEP1-203ENST00000570385 TRIM60Q495X7 471 aa10.32□□□□□ -0.76
CTDNEP1-203ENST00000570385 FAM47AQ5JRC9 791 aa10.32□□□□□ -0.76
CTDNEP1-203ENST00000570385 SLC39A5Q6ZMH5 540 aa10.32□□□□□ -0.76
CTDNEP1-203ENST00000570385 OSBP2Q969R2 916 aa10.32□□□□□ -0.76
CTDNEP1-203ENST00000570385 LENG1Q96BZ8 264 aaPredicted RBP10.32□□□□□ -0.76
CTDNEP1-203ENST00000570385 CHMP4CQ96CF2 233 aa10.32□□□□□ -0.76
CTDNEP1-203ENST00000570385 FAM161BQ96MY7 647 aa10.32□□□□□ -0.76
CTDNEP1-203ENST00000570385 MKNK2Q9HBH9 465 aa10.32□□□□□ -0.76
CTDNEP1-203ENST00000570385 PRKAG2Q9UGJ0 569 aa10.32□□□□□ -0.76
CTDNEP1-203ENST00000570385 COL11A1P12107 1806 aaPredicted RBP10.32□□□□□ -0.76
CTDNEP1-203ENST00000570385 CUL9Q8IWT3 2517 aa10.32□□□□□ -0.76
CTDNEP1-203ENST00000570385 A0A0G2JMZ2 1700 aa10.31□□□□□ -0.76
CTDNEP1-203ENST00000570385 M0R2C6 588 aa10.31□□□□□ -0.76
CTDNEP1-203ENST00000570385 DLL1O00548 723 aa10.31□□□□□ -0.76
CTDNEP1-203ENST00000570385 SLC25A27O95847 323 aa10.31□□□□□ -0.76
CTDNEP1-203ENST00000570385 PGK1P00558 417 aa10.31□□□□□ -0.76
CTDNEP1-203ENST00000570385 RASA1P20936 1047 aa10.31□□□□□ -0.76
CTDNEP1-203ENST00000570385 KCTD2Q14681 263 aa10.31□□□□□ -0.76
CTDNEP1-203ENST00000570385 LRRC41Q15345 812 aa10.31□□□□□ -0.76
CTDNEP1-203ENST00000570385 RIOX2Q8IUF8 465 aa10.31□□□□□ -0.76
CTDNEP1-203ENST00000570385 ABRAQ8N0Z2 381 aa10.31□□□□□ -0.76
CTDNEP1-203ENST00000570385 CPXCR1Q8N123 301 aa10.31□□□□□ -0.76
CTDNEP1-203ENST00000570385 KBTBD3Q8NAB2 608 aa10.31□□□□□ -0.76
CTDNEP1-203ENST00000570385 EPB41L4AQ9HCS5 686 aaPredicted RBP10.31□□□□□ -0.76
CTDNEP1-203ENST00000570385 MTMR10Q9NXD2 777 aa10.31□□□□□ -0.76
CTDNEP1-203ENST00000570385 ARPP21Q9UBL0 812 aaPredicted RBP10.31□□□□□ -0.76
CTDNEP1-203ENST00000570385 PPP1R9AQ9ULJ8 1098 aa10.31□□□□□ -0.76
CTDNEP1-203ENST00000570385 ADAMTS5Q9UNA0 930 aa10.31□□□□□ -0.76
CTDNEP1-203ENST00000570385 PARP14Q460N5 1801 aa10.3□□□□□ -0.76
CTDNEP1-203ENST00000570385 F5H6K3 240 aa10.3□□□□□ -0.76
CTDNEP1-203ENST00000570385 RNF113AO15541 343 aaKnown RBP10.3□□□□□ -0.76
CTDNEP1-203ENST00000570385 GPAA1O43292 621 aa10.3□□□□□ -0.76
CTDNEP1-203ENST00000570385 NDUFB10O96000 172 aa10.3□□□□□ -0.76
CTDNEP1-203ENST00000570385 TDO2P48775 406 aa10.3□□□□□ -0.76
CTDNEP1-203ENST00000570385 KLRC3Q07444 240 aa10.3□□□□□ -0.76
CTDNEP1-203ENST00000570385 ZNF792Q3KQV3 632 aa10.3□□□□□ -0.76
CTDNEP1-203ENST00000570385 SH3RF1Q7Z6J0 888 aa10.3□□□□□ -0.76
CTDNEP1-203ENST00000570385 REPS2Q8NFH8 660 aa10.3□□□□□ -0.76
CTDNEP1-203ENST00000570385 OTUD7AQ8TE49 926 aaPredicted RBP10.3□□□□□ -0.76
CTDNEP1-203ENST00000570385 APPBP2Q92624 585 aa10.3□□□□□ -0.76
CTDNEP1-203ENST00000570385 BADQ92934 168 aa10.3□□□□□ -0.76
CTDNEP1-203ENST00000570385 GPATCH3Q96I76 525 aa10.3□□□□□ -0.76
CTDNEP1-203ENST00000570385 SLF1Q9BQI6 1058 aa10.3□□□□□ -0.76
CTDNEP1-203ENST00000570385 TINF2Q9BSI4 451 aa10.3□□□□□ -0.76
CTDNEP1-203ENST00000570385 DCTPP1Q9H773 170 aa10.3□□□□□ -0.76
CTDNEP1-203ENST00000570385 XPNPEP3Q9NQH7 507 aa10.3□□□□□ -0.76
CTDNEP1-203ENST00000570385 CLIP2Q9UDT6 1046 aa10.3□□□□□ -0.76
CTDNEP1-203ENST00000570385 ZNF214Q9UL59 606 aaPredicted RBP10.3□□□□□ -0.76
CTDNEP1-203ENST00000570385 RIPK3Q9Y572 518 aa10.3□□□□□ -0.76
CTDNEP1-203ENST00000570385 ZNF236Q9UL36 1845 aa10.29□□□□□ -0.76
CTDNEP1-203ENST00000570385 RARBP10826 455 aa10.29□□□□□ -0.76
CTDNEP1-203ENST00000570385 TLE2Q04725 743 aa10.29□□□□□ -0.76
CTDNEP1-203ENST00000570385 SHHQ15465 462 aa10.29□□□□□ -0.76
CTDNEP1-203ENST00000570385 SBK1Q52WX2 424 aa10.29□□□□□ -0.76
CTDNEP1-203ENST00000570385 C9orf50Q5SZB4 431 aa10.29□□□□□ -0.76
CTDNEP1-203ENST00000570385 SNRNP48Q6IEG0 339 aaKnown RBP10.29□□□□□ -0.76
CTDNEP1-203ENST00000570385 GPR153Q6NV75 609 aa10.29□□□□□ -0.76
CTDNEP1-203ENST00000570385 LRRC47Q8N1G4 583 aaKnown RBP10.29□□□□□ -0.76
CTDNEP1-203ENST00000570385 KIFC2Q96AC6 838 aa10.29□□□□□ -0.76
CTDNEP1-203ENST00000570385 DDX11Q96FC9 970 aa10.29□□□□□ -0.76
CTDNEP1-203ENST00000570385 SEC62Q99442 399 aaKnown RBP10.29□□□□□ -0.76
CTDNEP1-203ENST00000570385 RAVER2Q9HCJ3 691 aaKnown RBP10.29□□□□□ -0.76
CTDNEP1-203ENST00000570385 ISY1Q9ULR0 285 aaKnown RBP10.29□□□□□ -0.76
CTDNEP1-203ENST00000570385 COL6A3P12111 3177 aa10.29□□□□□ -0.76
CTDNEP1-203ENST00000570385 TRIM43BA6NCK2 446 aa10.28□□□□□ -0.76
CTDNEP1-203ENST00000570385 ZNF865P0CJ78 1059 aaPredicted RBP10.28□□□□□ -0.76
CTDNEP1-203ENST00000570385 IRX5P78411 483 aaPredicted RBP10.28□□□□□ -0.76
CTDNEP1-203ENST00000570385 IFNL3Q8IZI9 196 aa10.28□□□□□ -0.76
CTDNEP1-203ENST00000570385 ZNF444Q8N0Y2 327 aaPredicted RBP10.28□□□□□ -0.76
CTDNEP1-203ENST00000570385 TRIM43Q96BQ3 446 aaPredicted RBP10.28□□□□□ -0.76
CTDNEP1-203ENST00000570385 CEP95Q96GE4 821 aa10.28□□□□□ -0.76
CTDNEP1-203ENST00000570385 TEX13BQ9BXU2 312 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms