RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 GAL3ST3Q96A11 431 aa4.15□□□□□ -1.75
CNOT1-221ENST00000569924 APBA2Q99767 749 aa4.15□□□□□ -1.75
CNOT1-221ENST00000569924 EMILIN2Q9BXX0 1053 aa4.15□□□□□ -1.75
CNOT1-221ENST00000569924 EPN3Q9H201 632 aa4.15□□□□□ -1.75
CNOT1-221ENST00000569924 CLEC4MQ9H2X3 399 aaPredicted RBP4.15□□□□□ -1.75
CNOT1-221ENST00000569924 SPON1Q9HCB6 807 aa4.15□□□□□ -1.75
CNOT1-221ENST00000569924 GPAMQ9HCL2 828 aa4.15□□□□□ -1.75
CNOT1-221ENST00000569924 MAPRE3Q9UPY8 281 aa4.15□□□□□ -1.75
CNOT1-221ENST00000569924 POLR3KQ9Y2Y1 108 aaPredicted RBP4.15□□□□□ -1.75
CNOT1-221ENST00000569924 DYRK1BQ9Y463 629 aa4.15□□□□□ -1.75
CNOT1-221ENST00000569924 COL5A2P05997 1499 aaPredicted RBP4.15□□□□□ -1.75
CNOT1-221ENST00000569924 AATKQ6ZMQ8 1374 aa4.14□□□□□ -1.75
CNOT1-221ENST00000569924 NINLQ9Y2I6 1382 aa4.14□□□□□ -1.75
CNOT1-221ENST00000569924 OVOS2A0A0G2JMS6 1433 aa4.14□□□□□ -1.75
CNOT1-221ENST00000569924 OVOS2A0A0J9YW53 1432 aa4.14□□□□□ -1.75
CNOT1-221ENST00000569924 BCL9O00512 1426 aa4.14□□□□□ -1.75
CNOT1-221ENST00000569924 CRB1P82279 1406 aa4.14□□□□□ -1.75
CNOT1-221ENST00000569924 OVOS2Q6IE36 1432 aa4.14□□□□□ -1.75
CNOT1-221ENST00000569924 PPIP5K1Q6PFW1 1433 aa4.14□□□□□ -1.75
CNOT1-221ENST00000569924 PLSCR1O15162 318 aa4.14□□□□□ -1.75
CNOT1-221ENST00000569924 ATXN7O15265 892 aaPredicted RBP4.14□□□□□ -1.75
CNOT1-221ENST00000569924 CREB3O43889 395 aa4.14□□□□□ -1.75
CNOT1-221ENST00000569924 GRIN3BO60391 1043 aa4.14□□□□□ -1.75
CNOT1-221ENST00000569924 CAND2O75155 1236 aa4.14□□□□□ -1.75
CNOT1-221ENST00000569924 B3GALT4O96024 378 aa4.14□□□□□ -1.75
CNOT1-221ENST00000569924 SMPD1P17405 629 aa4.14□□□□□ -1.75
CNOT1-221ENST00000569924 GNALP38405 381 aa4.14□□□□□ -1.75
CNOT1-221ENST00000569924 NRLP54845 237 aa4.14□□□□□ -1.75
CNOT1-221ENST00000569924 LAMC2Q13753 1193 aa4.14□□□□□ -1.75
CNOT1-221ENST00000569924 CBX2Q14781 532 aaPredicted RBP4.14□□□□□ -1.75
CNOT1-221ENST00000569924 PPP2R5AQ15172 486 aa4.14□□□□□ -1.75
CNOT1-221ENST00000569924 FNDC3BQ53EP0 1204 aaKnown RBP4.14□□□□□ -1.75
CNOT1-221ENST00000569924 EFHC2Q5JST6 749 aa4.14□□□□□ -1.75
CNOT1-221ENST00000569924 INTS3Q68E01 1043 aaKnown RBP4.14□□□□□ -1.75
CNOT1-221ENST00000569924 FIGNL1Q6PIW4 674 aa4.14□□□□□ -1.75
CNOT1-221ENST00000569924 TSHZ1Q6ZSZ6 1077 aa4.14□□□□□ -1.75
CNOT1-221ENST00000569924 DHX32Q7L7V1 743 aaKnown RBP4.14□□□□□ -1.75
CNOT1-221ENST00000569924 SULF2Q8IWU5 870 aa4.14□□□□□ -1.75
CNOT1-221ENST00000569924 UBR7Q8N806 425 aa4.14□□□□□ -1.75
CNOT1-221ENST00000569924 KIF2CQ99661 725 aa4.14□□□□□ -1.75
CNOT1-221ENST00000569924 RUSC1Q9BVN2 902 aa4.14□□□□□ -1.75
CNOT1-221ENST00000569924 PBX4Q9BYU1 374 aa4.14□□□□□ -1.75
CNOT1-221ENST00000569924 MUC3BQ9H195 1237 aa4.14□□□□□ -1.75
CNOT1-221ENST00000569924 ANTXR1Q9H6X2 564 aa4.14□□□□□ -1.75
CNOT1-221ENST00000569924 HCSTQ9UBK5 93 aa4.14□□□□□ -1.75
CNOT1-221ENST00000569924 SLIT3O75094 1523 aa4.14□□□□□ -1.75
CNOT1-221ENST00000569924 CENPJQ9HC77 1338 aaPredicted RBP4.14□□□□□ -1.75
CNOT1-221ENST00000569924 SBF2Q86WG5 1849 aa4.14□□□□□ -1.75
CNOT1-221ENST00000569924 USP6P35125 1406 aa4.13□□□□□ -1.75
CNOT1-221ENST00000569924 COL18A1P39060 1754 aa4.13□□□□□ -1.75
CNOT1-221ENST00000569924 LOC102724428A0A0B4J2F2 783 aa4.13□□□□□ -1.75
CNOT1-221ENST00000569924 GSG1L2A8MUP6 293 aa4.13□□□□□ -1.75
CNOT1-221ENST00000569924 PLD2O14939 933 aa4.13□□□□□ -1.75
CNOT1-221ENST00000569924 RASGRP1O95267 797 aa4.13□□□□□ -1.75
CNOT1-221ENST00000569924 BMP2P12643 396 aa4.13□□□□□ -1.75
CNOT1-221ENST00000569924 CPEP16870 476 aa4.13□□□□□ -1.75
CNOT1-221ENST00000569924 GUCY2FP51841 1108 aa4.13□□□□□ -1.75
CNOT1-221ENST00000569924 SIK1P57059 783 aa4.13□□□□□ -1.75
CNOT1-221ENST00000569924 PTPN11Q06124 597 aaPredicted RBP4.13□□□□□ -1.75
CNOT1-221ENST00000569924 MCL1Q07820 350 aa4.13□□□□□ -1.75
CNOT1-221ENST00000569924 PCDH1Q08174 1060 aa4.13□□□□□ -1.75
CNOT1-221ENST00000569924 ZNF252P-AS1Q0IIN9 211 aa4.13□□□□□ -1.75
CNOT1-221ENST00000569924 HLTFQ14527 1009 aaKnown RBP eCLIP4.13□□□□□ -1.75
CNOT1-221ENST00000569924 LBRQ14739 615 aaKnown RBP4.13□□□□□ -1.75
CNOT1-221ENST00000569924 DDB1Q16531 1140 aa4.13□□□□□ -1.75
CNOT1-221ENST00000569924 ZNF423Q2M1K9 1284 aa4.13□□□□□ -1.75
CNOT1-221ENST00000569924 WWC2Q6AWC2 1192 aa4.13□□□□□ -1.75
CNOT1-221ENST00000569924 VHLLQ6RSH7 139 aa4.13□□□□□ -1.75
CNOT1-221ENST00000569924 UNC5AQ6ZN44 842 aa4.13□□□□□ -1.75
CNOT1-221ENST00000569924 TICAM2Q86XR7 235 aa4.13□□□□□ -1.75
CNOT1-221ENST00000569924 CYP4X1Q8N118 509 aa4.13□□□□□ -1.75
CNOT1-221ENST00000569924 AFAP1L2Q8N4X5 818 aa4.13□□□□□ -1.75
CNOT1-221ENST00000569924 ATL2Q8NHH9 583 aa4.13□□□□□ -1.75
CNOT1-221ENST00000569924 GRIN3AQ8TCU5 1115 aa4.13□□□□□ -1.75
CNOT1-221ENST00000569924 STK35Q8TDR2 534 aa4.13□□□□□ -1.75
CNOT1-221ENST00000569924 TMEM40Q8WWA1 233 aa4.13□□□□□ -1.75
CNOT1-221ENST00000569924 BSNDQ8WZ55 320 aa4.13□□□□□ -1.75
CNOT1-221ENST00000569924 KISS1RQ969F8 398 aaPredicted RBP4.13□□□□□ -1.75
CNOT1-221ENST00000569924 NSUN5Q96P11 429 aaKnown RBP4.13□□□□□ -1.75
CNOT1-221ENST00000569924 TRERF1Q96PN7 1200 aa4.13□□□□□ -1.75
CNOT1-221ENST00000569924 RASSF4Q9H2L5 321 aa4.13□□□□□ -1.75
CNOT1-221ENST00000569924 PHAXQ9H814 394 aaKnown RBP4.13□□□□□ -1.75
CNOT1-221ENST00000569924 CBX8Q9HC52 389 aa4.13□□□□□ -1.75
CNOT1-221ENST00000569924 NCOA5Q9HCD5 579 aaKnown RBP4.13□□□□□ -1.75
CNOT1-221ENST00000569924 PCDHGC4Q9Y5F7 938 aa4.13□□□□□ -1.75
CNOT1-221ENST00000569924 COMMD10Q9Y6G5 202 aa4.13□□□□□ -1.75
CNOT1-221ENST00000569924 WNK3Q9BYP7 1800 aa4.13□□□□□ -1.75
CNOT1-221ENST00000569924 WDR17Q8IZU2 1322 aa4.13□□□□□ -1.75
CNOT1-221ENST00000569924 LTBP3Q9NS15 1303 aa4.13□□□□□ -1.75
CNOT1-221ENST00000569924 LRRC37A3O60309 1634 aa4.13□□□□□ -1.75
CNOT1-221ENST00000569924 CPSF1Q10570 1443 aaKnown RBP4.12□□□□□ -1.75
CNOT1-221ENST00000569924 CASZ1Q86V15 1759 aa4.12□□□□□ -1.75
CNOT1-221ENST00000569924 ABCC6O95255 1503 aa4.12□□□□□ -1.75
CNOT1-221ENST00000569924 DNAJC25-GNG10A0A024R161 153 aa4.12□□□□□ -1.75
CNOT1-221ENST00000569924 TTLL8A6PVC2 850 aa4.12□□□□□ -1.75
CNOT1-221ENST00000569924 CAPN5O15484 640 aaPredicted RBP4.12□□□□□ -1.75
CNOT1-221ENST00000569924 PLIN1O60240 522 aa4.12□□□□□ -1.75
CNOT1-221ENST00000569924 SUSD5O60279 629 aa4.12□□□□□ -1.75
CNOT1-221ENST00000569924 EYA4O95677 639 aa4.12□□□□□ -1.75
CNOT1-221ENST00000569924 KRT18P05783 430 aaKnown RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms