RNA–Protein interactions for RNA: ENST00000569709.5

RNPS1-225, Transcript of RNA binding protein with serine rich domain 1, human

TSL 4

Gene RNPS1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNPS1-225	ENST00000569709	IL1RAPL2	Q9NP60	686 aa		12.86	□□□□□ -0.35
RNPS1-225	ENST00000569709	PRDM5	Q9NQX1	630 aa	Predicted RBP	12.86	□□□□□ -0.35
RNPS1-225	ENST00000569709	ZNF532	Q9HCE3	1301 aa		12.86	□□□□□ -0.35
RNPS1-225	ENST00000569709	FLOT1	O75955	427 aa		12.85	□□□□□ -0.35
RNPS1-225	ENST00000569709	CYP2D6	P10635	497 aa		12.85	□□□□□ -0.35
RNPS1-225	ENST00000569709	MFAP1	P55081	439 aa	Known RBP	12.85	□□□□□ -0.35
RNPS1-225	ENST00000569709	TRIM60	Q495X7	471 aa		12.85	□□□□□ -0.35
RNPS1-225	ENST00000569709	BMP2KL	Q5H9B9	411 aa		12.85	□□□□□ -0.35
RNPS1-225	ENST00000569709	KIAA1755	Q5JYT7	1200 aa		12.85	□□□□□ -0.35
RNPS1-225	ENST00000569709	ZNF697	Q5TEC3	545 aa		12.85	□□□□□ -0.35
RNPS1-225	ENST00000569709	SLC39A5	Q6ZMH5	540 aa		12.85	□□□□□ -0.35
RNPS1-225	ENST00000569709	NCAPG2	Q86XI2	1143 aa		12.85	□□□□□ -0.35
RNPS1-225	ENST00000569709	CLEC10A	Q8IUN9	316 aa		12.85	□□□□□ -0.35
RNPS1-225	ENST00000569709	LCORL	Q8N3X6	602 aa		12.85	□□□□□ -0.35
RNPS1-225	ENST00000569709	DNAJC2	Q99543	621 aa	Known RBP	12.85	□□□□□ -0.35
RNPS1-225	ENST00000569709	DCP1A	Q9NPI6	582 aa	Predicted RBP	12.85	□□□□□ -0.35
RNPS1-225	ENST00000569709	SLC5A4	Q9NY91	659 aa		12.85	□□□□□ -0.35
RNPS1-225	ENST00000569709	MYH7	P12883	1935 aa		12.85	□□□□□ -0.35
RNPS1-225	ENST00000569709	MUC3A	Q02505	3323 aa		12.84	□□□□□ -0.35
RNPS1-225	ENST00000569709	TCRBV5S4A2T	A0A5A2	114 aa		12.84	□□□□□ -0.35
RNPS1-225	ENST00000569709	GOLIM4	O00461	696 aa		12.84	□□□□□ -0.35
RNPS1-225	ENST00000569709	SMARCA5	O60264	1052 aa	Predicted RBP	12.84	□□□□□ -0.35
RNPS1-225	ENST00000569709	DSG3	P32926	999 aa		12.84	□□□□□ -0.35
RNPS1-225	ENST00000569709	ICA1	Q05084	483 aa		12.84	□□□□□ -0.35
RNPS1-225	ENST00000569709	SHH	Q15465	462 aa		12.84	□□□□□ -0.35
RNPS1-225	ENST00000569709	HSP90AB4P	Q58FF6	505 aa		12.84	□□□□□ -0.35
RNPS1-225	ENST00000569709	PRAMEF19	Q5SWL8	479 aa		12.84	□□□□□ -0.35
RNPS1-225	ENST00000569709	SAMD1	Q6SPF0	538 aa	Predicted RBP	12.84	□□□□□ -0.35
RNPS1-225	ENST00000569709	ABRA	Q8N0Z2	381 aa		12.84	□□□□□ -0.35
RNPS1-225	ENST00000569709	SPICE1	Q8N0Z3	855 aa		12.84	□□□□□ -0.35
RNPS1-225	ENST00000569709	RHPN1	Q8TCX5	695 aa		12.84	□□□□□ -0.35
RNPS1-225	ENST00000569709	ATG4C	Q96DT6	458 aa		12.84	□□□□□ -0.35
RNPS1-225	ENST00000569709	DYNLL2	Q96FJ2	89 aa		12.84	□□□□□ -0.35
RNPS1-225	ENST00000569709	COL25A1	Q9BXS0	654 aa	Predicted RBP	12.84	□□□□□ -0.35
RNPS1-225	ENST00000569709	MROH8	Q9H579	483 aa		12.84	□□□□□ -0.35
RNPS1-225	ENST00000569709	ARHGEF10L	Q9HCE6	1279 aa		12.84	□□□□□ -0.35
RNPS1-225	ENST00000569709	SWAP70	Q9UH65	585 aa		12.84	□□□□□ -0.35
RNPS1-225	ENST00000569709	FCER1A	P12319	257 aa		12.83	□□□□□ -0.36
RNPS1-225	ENST00000569709	ADCYAP1R1	P41586	468 aa		12.83	□□□□□ -0.36
RNPS1-225	ENST00000569709	SNX17	Q15036	470 aa		12.83	□□□□□ -0.36
RNPS1-225	ENST00000569709	LRRC41	Q15345	812 aa		12.83	□□□□□ -0.36
RNPS1-225	ENST00000569709	FAM47A	Q5JRC9	791 aa		12.83	□□□□□ -0.36
RNPS1-225	ENST00000569709	C9orf50	Q5SZB4	431 aa		12.83	□□□□□ -0.36
RNPS1-225	ENST00000569709	CLASRP	Q8N2M8	674 aa	Known RBP	12.83	□□□□□ -0.36
RNPS1-225	ENST00000569709	BAD	Q92934	168 aa		12.83	□□□□□ -0.36
RNPS1-225	ENST00000569709	FERMT2	Q96AC1	680 aa		12.83	□□□□□ -0.36
RNPS1-225	ENST00000569709	MAML3	Q96JK9	1138 aa		12.83	□□□□□ -0.36
RNPS1-225	ENST00000569709	SH2D4A	Q9H788	454 aa		12.83	□□□□□ -0.36
RNPS1-225	ENST00000569709	ARMT1	Q9H993	441 aa		12.83	□□□□□ -0.36
RNPS1-225	ENST00000569709	PDLIM7	Q9NR12	457 aa		12.83	□□□□□ -0.36
RNPS1-225	ENST00000569709	TMX2	Q9Y320	296 aa		12.83	□□□□□ -0.36
RNPS1-225	ENST00000569709	AKR1B1	P15121	316 aa		12.82	□□□□□ -0.36
RNPS1-225	ENST00000569709	SH3RF1	Q7Z6J0	888 aa		12.82	□□□□□ -0.36
RNPS1-225	ENST00000569709	SIAH1	Q8IUQ4	282 aa		12.82	□□□□□ -0.36
RNPS1-225	ENST00000569709	PLEKHM2	Q8IWE5	1019 aa		12.82	□□□□□ -0.36
RNPS1-225	ENST00000569709	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
RNPS1-225	ENST00000569709	VCPKMT	Q9H867	229 aa		12.82	□□□□□ -0.36
RNPS1-225	ENST00000569709	TRIM43B	A6NCK2	446 aa		12.81	□□□□□ -0.36
RNPS1-225	ENST00000569709	WDR46	O15213	610 aa	Known RBP	12.81	□□□□□ -0.36
RNPS1-225	ENST00000569709	PRKAB2	O43741	272 aa		12.81	□□□□□ -0.36
RNPS1-225	ENST00000569709	CDC45	O75419	566 aa		12.81	□□□□□ -0.36
RNPS1-225	ENST00000569709	SLC25A27	O95847	323 aa		12.81	□□□□□ -0.36
RNPS1-225	ENST00000569709	IFIT2	P09913	472 aa	Known RBP	12.81	□□□□□ -0.36
RNPS1-225	ENST00000569709	TMEM132B	Q14DG7	1078 aa		12.81	□□□□□ -0.36
RNPS1-225	ENST00000569709	SLFNL1	Q499Z3	407 aa		12.81	□□□□□ -0.36
RNPS1-225	ENST00000569709	TTC22	Q5TAA0	569 aa		12.81	□□□□□ -0.36
RNPS1-225	ENST00000569709	TRIM43	Q96BQ3	446 aa	Predicted RBP	12.81	□□□□□ -0.36
RNPS1-225	ENST00000569709	KIF1BP	Q96EK5	621 aa		12.81	□□□□□ -0.36
RNPS1-225	ENST00000569709	TBC1D32	Q96NH3	1257 aa		12.81	□□□□□ -0.36
RNPS1-225	ENST00000569709	MMP19	Q99542	508 aa		12.81	□□□□□ -0.36
RNPS1-225	ENST00000569709	CDX2	Q99626	313 aa	Predicted RBP	12.81	□□□□□ -0.36
RNPS1-225	ENST00000569709	XPNPEP3	Q9NQH7	507 aa		12.81	□□□□□ -0.36
RNPS1-225	ENST00000569709	ATP8A2	Q9NTI2	1148 aa		12.81	□□□□□ -0.36
RNPS1-225	ENST00000569709	CYP2D7	A0A087X1C5	515 aa		12.8	□□□□□ -0.36
RNPS1-225	ENST00000569709	SMIM22	K7EJ46	135 aa		12.8	□□□□□ -0.36
RNPS1-225	ENST00000569709	MBD4	O95243	580 aa		12.8	□□□□□ -0.36
RNPS1-225	ENST00000569709	PGK2	P07205	417 aa		12.8	□□□□□ -0.36
RNPS1-225	ENST00000569709	RARB	P10826	455 aa		12.8	□□□□□ -0.36
RNPS1-225	ENST00000569709	ADD2	P35612	726 aa		12.8	□□□□□ -0.36
RNPS1-225	ENST00000569709	CDK8	P49336	464 aa		12.8	□□□□□ -0.36
RNPS1-225	ENST00000569709	SMAD3	P84022	425 aa	Known RBP	12.8	□□□□□ -0.36
RNPS1-225	ENST00000569709	TLE2	Q04725	743 aa		12.8	□□□□□ -0.36
RNPS1-225	ENST00000569709	C1orf53	Q5VUE5	145 aa		12.8	□□□□□ -0.36
RNPS1-225	ENST00000569709	AMOTL1	Q8IY63	956 aa		12.8	□□□□□ -0.36
RNPS1-225	ENST00000569709	MAFA	Q8NHW3	353 aa	Predicted RBP	12.8	□□□□□ -0.36
RNPS1-225	ENST00000569709	OTUD7A	Q8TE49	926 aa	Predicted RBP	12.8	□□□□□ -0.36
RNPS1-225	ENST00000569709	CCDC17	Q96LX7	622 aa		12.8	□□□□□ -0.36
RNPS1-225	ENST00000569709	LRRCC1	Q9C099	1032 aa		12.8	□□□□□ -0.36
RNPS1-225	ENST00000569709	SEMA6B	Q9H3T3	888 aa		12.8	□□□□□ -0.36
RNPS1-225	ENST00000569709	FBXO28	Q9NVF7	368 aa		12.8	□□□□□ -0.36
RNPS1-225	ENST00000569709	PAG1	Q9NWQ8	432 aa		12.8	□□□□□ -0.36
RNPS1-225	ENST00000569709	PHF24	Q9UPV7	400 aa		12.8	□□□□□ -0.36
RNPS1-225	ENST00000569709	PGK1	P00558	417 aa		12.79	□□□□□ -0.36
RNPS1-225	ENST00000569709	GSPT1	P15170	499 aa	Known RBP	12.79	□□□□□ -0.36
RNPS1-225	ENST00000569709	BECN1	Q14457	450 aa		12.79	□□□□□ -0.36
RNPS1-225	ENST00000569709	KCTD2	Q14681	263 aa		12.79	□□□□□ -0.36
RNPS1-225	ENST00000569709	C12orf60	Q5U649	245 aa		12.79	□□□□□ -0.36
RNPS1-225	ENST00000569709	C16orf86	Q6ZW13	317 aa		12.79	□□□□□ -0.36
RNPS1-225	ENST00000569709	RNF180	Q86T96	592 aa		12.79	□□□□□ -0.36
RNPS1-225	ENST00000569709	RIOX2	Q8IUF8	465 aa		12.79	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 19 ms