RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 SYN1P17600 705 aa16.6■□□□□ 0.25
GTF3C1-211ENST00000569653 LRRC26Q2I0M4 334 aa16.6■□□□□ 0.25
GTF3C1-211ENST00000569653 FAM83BQ5T0W9 1011 aa16.6■□□□□ 0.25
GTF3C1-211ENST00000569653 GIMAP6Q6P9H5 292 aa16.6■□□□□ 0.25
GTF3C1-211ENST00000569653 SAMD1Q6SPF0 538 aaPredicted RBP16.6■□□□□ 0.25
GTF3C1-211ENST00000569653 GDF15Q99988 308 aa16.6■□□□□ 0.25
GTF3C1-211ENST00000569653 KANSL2Q9H9L4 492 aa16.6■□□□□ 0.25
GTF3C1-211ENST00000569653 IVNS1ABPQ9Y6Y0 642 aa16.6■□□□□ 0.25
GTF3C1-211ENST00000569653 COL6A3P12111 3177 aa16.59■□□□□ 0.25
GTF3C1-211ENST00000569653 MCM3APO60318 1980 aa16.59■□□□□ 0.25
GTF3C1-211ENST00000569653 PRDM1O75626 825 aa16.59■□□□□ 0.25
GTF3C1-211ENST00000569653 PLS1Q14651 629 aa16.59■□□□□ 0.25
GTF3C1-211ENST00000569653 DDX20Q9UHI6 824 aaKnown RBP16.59■□□□□ 0.25
GTF3C1-211ENST00000569653 ZNF214Q9UL59 606 aaPredicted RBP16.59■□□□□ 0.25
GTF3C1-211ENST00000569653 TTC41PQ6P2S7 1318 aa16.59■□□□□ 0.25
GTF3C1-211ENST00000569653 LTBP2Q14767 1821 aa16.59■□□□□ 0.25
GTF3C1-211ENST00000569653 PRAMEF19Q5SWL8 479 aa16.58■□□□□ 0.24
GTF3C1-211ENST00000569653 MFSD14CQ5VZR4 134 aa16.58■□□□□ 0.24
GTF3C1-211ENST00000569653 AMOTL1Q8IY63 956 aa16.58■□□□□ 0.24
GTF3C1-211ENST00000569653 MB21D1Q8N884 522 aa16.58■□□□□ 0.24
GTF3C1-211ENST00000569653 DDRGK1Q96HY6 314 aa16.58■□□□□ 0.24
GTF3C1-211ENST00000569653 GPATCH3Q96I76 525 aa16.58■□□□□ 0.24
GTF3C1-211ENST00000569653 SH2D4AQ9H788 454 aa16.58■□□□□ 0.24
GTF3C1-211ENST00000569653 PPP1R9AQ9ULJ8 1098 aa16.58■□□□□ 0.24
GTF3C1-211ENST00000569653 TACC3Q9Y6A5 838 aa16.58■□□□□ 0.24
GTF3C1-211ENST00000569653 VWA5AO00534 786 aa16.57■□□□□ 0.24
GTF3C1-211ENST00000569653 NDUFB10O96000 172 aa16.57■□□□□ 0.24
GTF3C1-211ENST00000569653 ZFYP08048 801 aaPredicted RBP16.57■□□□□ 0.24
GTF3C1-211ENST00000569653 ZMYM1Q5SVZ6 1142 aa16.57■□□□□ 0.24
GTF3C1-211ENST00000569653 ANO1Q5XXA6 986 aa16.57■□□□□ 0.24
GTF3C1-211ENST00000569653 OLFML2BQ68BL8 750 aa16.57■□□□□ 0.24
GTF3C1-211ENST00000569653 CCDC129Q6ZRS4 1044 aa16.57■□□□□ 0.24
GTF3C1-211ENST00000569653 NCAPG2Q86XI2 1143 aa16.57■□□□□ 0.24
GTF3C1-211ENST00000569653 IFNL3Q8IZI9 196 aa16.57■□□□□ 0.24
GTF3C1-211ENST00000569653 MROH8Q9H579 483 aa16.57■□□□□ 0.24
GTF3C1-211ENST00000569653 STRNO43815 780 aa16.56■□□□□ 0.24
GTF3C1-211ENST00000569653 PGK2P07205 417 aa16.56■□□□□ 0.24
GTF3C1-211ENST00000569653 MX1P20591 662 aa16.56■□□□□ 0.24
GTF3C1-211ENST00000569653 MAGEA10P43363 369 aaPredicted RBP16.56■□□□□ 0.24
GTF3C1-211ENST00000569653 DPP9Q86TI2 863 aa16.56■□□□□ 0.24
GTF3C1-211ENST00000569653 RIOX2Q8IUF8 465 aa16.56■□□□□ 0.24
GTF3C1-211ENST00000569653 LRCH3Q96II8 777 aa16.56■□□□□ 0.24
GTF3C1-211ENST00000569653 MAML3Q96JK9 1138 aa16.56■□□□□ 0.24
GTF3C1-211ENST00000569653 NYAP2Q9P242 653 aa16.56■□□□□ 0.24
GTF3C1-211ENST00000569653 RIPK3Q9Y572 518 aa16.56■□□□□ 0.24
GTF3C1-211ENST00000569653 PLIN4Q96Q06 1357 aa16.55■□□□□ 0.24
GTF3C1-211ENST00000569653 PATL2C9JE40 543 aaKnown RBP16.55■□□□□ 0.24
GTF3C1-211ENST00000569653 F5H6K3 240 aa16.55■□□□□ 0.24
GTF3C1-211ENST00000569653 RAD21O60216 631 aa16.55■□□□□ 0.24
GTF3C1-211ENST00000569653 CNGA1P29973 690 aa16.55■□□□□ 0.24
GTF3C1-211ENST00000569653 TDO2P48775 406 aa16.55■□□□□ 0.24
GTF3C1-211ENST00000569653 KLRC3Q07444 240 aa16.55■□□□□ 0.24
GTF3C1-211ENST00000569653 ABRAQ8N0Z2 381 aa16.55■□□□□ 0.24
GTF3C1-211ENST00000569653 CEP95Q96GE4 821 aa16.55■□□□□ 0.24
GTF3C1-211ENST00000569653 FSD1Q9BTV5 496 aa16.55■□□□□ 0.24
GTF3C1-211ENST00000569653 MKNK2Q9HBH9 465 aa16.55■□□□□ 0.24
GTF3C1-211ENST00000569653 GOPCQ9HD26 462 aa16.55■□□□□ 0.24
GTF3C1-211ENST00000569653 INCENPQ9NQS7 918 aa16.55■□□□□ 0.24
GTF3C1-211ENST00000569653 TAL1P17542 331 aaPredicted RBP16.54■□□□□ 0.24
GTF3C1-211ENST00000569653 VPS53Q5VIR6 699 aa16.54■□□□□ 0.24
GTF3C1-211ENST00000569653 LRRC47Q8N1G4 583 aaKnown RBP16.54■□□□□ 0.24
GTF3C1-211ENST00000569653 CLIP2Q9UDT6 1046 aa16.54■□□□□ 0.24
GTF3C1-211ENST00000569653 LCTP09848 1927 aa16.53■□□□□ 0.24
GTF3C1-211ENST00000569653 A0A1W2PPC1 479 aa16.53■□□□□ 0.24
GTF3C1-211ENST00000569653 APPP05067 770 aa16.53■□□□□ 0.24
GTF3C1-211ENST00000569653 FCER1AP12319 257 aa16.53■□□□□ 0.24
GTF3C1-211ENST00000569653 GNAT2P19087 354 aa16.53■□□□□ 0.24
GTF3C1-211ENST00000569653 BMP8BP34820 402 aa16.53■□□□□ 0.24
GTF3C1-211ENST00000569653 STAT3P40763 770 aa16.53■□□□□ 0.24
GTF3C1-211ENST00000569653 ZNF792Q3KQV3 632 aa16.53■□□□□ 0.24
GTF3C1-211ENST00000569653 FAM47AQ5JRC9 791 aa16.53■□□□□ 0.24
GTF3C1-211ENST00000569653 GJC2Q5T442 439 aaPredicted RBP16.53■□□□□ 0.24
GTF3C1-211ENST00000569653 RASGRP2Q7LDG7 609 aa16.53■□□□□ 0.24
GTF3C1-211ENST00000569653 MMP19Q99542 508 aa16.53■□□□□ 0.24
GTF3C1-211ENST00000569653 SENP6Q9GZR1 1112 aaPredicted RBP16.53■□□□□ 0.24
GTF3C1-211ENST00000569653 MTMR4Q9NYA4 1195 aa16.53■□□□□ 0.24
GTF3C1-211ENST00000569653 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.53■□□□□ 0.24
GTF3C1-211ENST00000569653 DNM1LO00429 736 aa16.52■□□□□ 0.24
GTF3C1-211ENST00000569653 ERC2O15083 957 aa16.52■□□□□ 0.24
GTF3C1-211ENST00000569653 SEPT4O43236 478 aa16.52■□□□□ 0.24
GTF3C1-211ENST00000569653 SLC25A27O95847 323 aa16.52■□□□□ 0.24
GTF3C1-211ENST00000569653 ATN1P54259 1190 aaPredicted RBP16.52■□□□□ 0.24
GTF3C1-211ENST00000569653 PPARAQ07869 468 aa16.52■□□□□ 0.24
GTF3C1-211ENST00000569653 ANKRD45Q5TZF3 282 aa16.52■□□□□ 0.24
GTF3C1-211ENST00000569653 NEDD1Q8NHV4 660 aa16.52■□□□□ 0.24
GTF3C1-211ENST00000569653 MKL1Q969V6 931 aa16.52■□□□□ 0.24
GTF3C1-211ENST00000569653 LENG1Q96BZ8 264 aaPredicted RBP16.52■□□□□ 0.24
GTF3C1-211ENST00000569653 FGD4Q96M96 766 aa16.52■□□□□ 0.24
GTF3C1-211ENST00000569653 SLF1Q9BQI6 1058 aa16.52■□□□□ 0.24
GTF3C1-211ENST00000569653 MSCO60682 206 aa16.51■□□□□ 0.23
GTF3C1-211ENST00000569653 PDE1AP54750 535 aa16.51■□□□□ 0.23
GTF3C1-211ENST00000569653 CTDSPL2Q05D32 466 aa16.51■□□□□ 0.23
GTF3C1-211ENST00000569653 HDAC1Q13547 482 aaPredicted RBP16.51■□□□□ 0.23
GTF3C1-211ENST00000569653 DNAJC25-GNG10A0A024R161 153 aa16.5■□□□□ 0.23
GTF3C1-211ENST00000569653 A0A0D9SFI3 127 aa16.5■□□□□ 0.23
GTF3C1-211ENST00000569653 NMT2O60551 498 aa16.5■□□□□ 0.23
GTF3C1-211ENST00000569653 ZNF865P0CJ78 1059 aaPredicted RBP16.5■□□□□ 0.23
GTF3C1-211ENST00000569653 SNRNP48Q6IEG0 339 aaKnown RBP16.5■□□□□ 0.23
GTF3C1-211ENST00000569653 CHMP4CQ96CF2 233 aa16.5■□□□□ 0.23
GTF3C1-211ENST00000569653 FAM227BQ96M60 508 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms