RNA–Protein interactions for RNA: ENST00000569380.5

SPSB3-211, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 1,781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-211ENST00000569380 CCDC96Q2M329 555 aa23.73■■□□□ 1.39
SPSB3-211ENST00000569380 ELP3Q9H9T3 547 aa23.73■■□□□ 1.39
SPSB3-211ENST00000569380 ISY1Q9ULR0 285 aaKnown RBP23.73■■□□□ 1.39
SPSB3-211ENST00000569380 ZHX2Q9Y6X8 837 aa23.73■■□□□ 1.39
SPSB3-211ENST00000569380 CNTNAP5Q8WYK1 1306 aa23.73■■□□□ 1.39
SPSB3-211ENST00000569380 DHX16O60231 1041 aaKnown RBP23.73■■□□□ 1.39
SPSB3-211ENST00000569380 IFNAR1P17181 557 aa23.73■■□□□ 1.39
SPSB3-211ENST00000569380 ZNF543Q08ER8 600 aa23.73■■□□□ 1.39
SPSB3-211ENST00000569380 SPP2Q13103 211 aa23.73■■□□□ 1.39
SPSB3-211ENST00000569380 PPP4R3BQ5MIZ7 849 aa23.73■■□□□ 1.39
SPSB3-211ENST00000569380 FEZ1Q99689 392 aa23.73■■□□□ 1.39
SPSB3-211ENST00000569380 GJB4Q9NTQ9 266 aa23.73■■□□□ 1.39
SPSB3-211ENST00000569380 RBM28Q9NW13 759 aaKnown RBP23.73■■□□□ 1.39
SPSB3-211ENST00000569380 ORC3Q9UBD5 711 aaPredicted RBP23.73■■□□□ 1.39
SPSB3-211ENST00000569380 ABT1Q9ULW3 272 aaKnown RBP23.73■■□□□ 1.39
SPSB3-211ENST00000569380 KLRF2D3W0D1 207 aa23.72■■□□□ 1.39
SPSB3-211ENST00000569380 CYTH3O43739 400 aa23.72■■□□□ 1.39
SPSB3-211ENST00000569380 CELF2O95319 508 aaKnown RBP23.72■■□□□ 1.39
SPSB3-211ENST00000569380 SLC16A2P36021 539 aa23.72■■□□□ 1.39
SPSB3-211ENST00000569380 MTMR2Q13614 643 aa23.72■■□□□ 1.39
SPSB3-211ENST00000569380 GMCL1P1Q8NEA9 526 aa23.72■■□□□ 1.39
SPSB3-211ENST00000569380 MAP3K14Q99558 947 aa23.72■■□□□ 1.39
SPSB3-211ENST00000569380 MYH6P13533 1939 aa23.72■■□□□ 1.39
SPSB3-211ENST00000569380 CCDC196A0A1B0GTZ2 297 aa23.71■■□□□ 1.39
SPSB3-211ENST00000569380 TRIM75PA6NK02 468 aa23.71■■□□□ 1.39
SPSB3-211ENST00000569380 KIF5BP33176 963 aa23.71■■□□□ 1.39
SPSB3-211ENST00000569380 FOXD4L5Q5VV16 416 aaPredicted RBP23.71■■□□□ 1.39
SPSB3-211ENST00000569380 FOXD4L4Q8WXT5 416 aaPredicted RBP23.71■■□□□ 1.39
SPSB3-211ENST00000569380 RASSF10A6NK89 507 aa23.7■■□□□ 1.39
SPSB3-211ENST00000569380 FMNL1O95466 1100 aaPredicted RBP23.7■■□□□ 1.39
SPSB3-211ENST00000569380 SLC1A4P43007 532 aa23.7■■□□□ 1.39
SPSB3-211ENST00000569380 VEGFBP49765 207 aa23.7■■□□□ 1.39
SPSB3-211ENST00000569380 MAP3K11Q16584 847 aa23.7■■□□□ 1.39
SPSB3-211ENST00000569380 VCPKMTQ9H867 229 aa23.7■■□□□ 1.39
SPSB3-211ENST00000569380 CWC22Q9HCG8 908 aaKnown RBP23.7■■□□□ 1.39
SPSB3-211ENST00000569380 GINM1Q9NU53 330 aa23.7■■□□□ 1.39
SPSB3-211ENST00000569380 CSADQ9Y600 493 aa23.7■■□□□ 1.39
SPSB3-211ENST00000569380 SSRP1Q08945 709 aaKnown RBP23.7■■□□□ 1.38
SPSB3-211ENST00000569380 OTUD7BQ6GQQ9 843 aa23.7■■□□□ 1.38
SPSB3-211ENST00000569380 ARMC9Q7Z3E5 817 aa23.7■■□□□ 1.38
SPSB3-211ENST00000569380 VAT1LQ9HCJ6 419 aa23.7■■□□□ 1.38
SPSB3-211ENST00000569380 V9GY48 417 aaPredicted RBP23.7■■□□□ 1.38
SPSB3-211ENST00000569380 FAM83BQ5T0W9 1011 aa23.69■■□□□ 1.38
SPSB3-211ENST00000569380 CPLX2Q6PUV4 134 aaKnown RBP23.69■■□□□ 1.38
SPSB3-211ENST00000569380 ANKRD13AQ8IZ07 590 aa23.69■■□□□ 1.38
SPSB3-211ENST00000569380 ZNF280CQ8ND82 737 aa23.69■■□□□ 1.38
SPSB3-211ENST00000569380 ZDHHC9Q9Y397 364 aa23.69■■□□□ 1.38
SPSB3-211ENST00000569380 CDKL5O76039 1030 aa23.68■■□□□ 1.38
SPSB3-211ENST00000569380 SYT1P21579 422 aa23.68■■□□□ 1.38
SPSB3-211ENST00000569380 GUCY1B3Q02153 619 aa23.68■■□□□ 1.38
SPSB3-211ENST00000569380 PPP2R5BQ15173 497 aa23.68■■□□□ 1.38
SPSB3-211ENST00000569380 ASPRV1Q53RT3 343 aa23.68■■□□□ 1.38
SPSB3-211ENST00000569380 FAM184AQ8NB25 1140 aa23.68■■□□□ 1.38
SPSB3-211ENST00000569380 DCAF4Q8WV16 495 aa23.68■■□□□ 1.38
SPSB3-211ENST00000569380 WDR18Q9BV38 432 aa23.68■■□□□ 1.38
SPSB3-211ENST00000569380 GBA2Q9HCG7 927 aaPredicted RBP23.68■■□□□ 1.38
SPSB3-211ENST00000569380 GOPCQ9HD26 462 aa23.68■■□□□ 1.38
SPSB3-211ENST00000569380 EMILIN3Q9NT22 766 aa23.68■■□□□ 1.38
SPSB3-211ENST00000569380 USP17L10C9JJH3 530 aa23.68■■□□□ 1.38
SPSB3-211ENST00000569380 HMGN5P82970 282 aaKnown RBP23.68■■□□□ 1.38
SPSB3-211ENST00000569380 PKN1Q16512 942 aa23.68■■□□□ 1.38
SPSB3-211ENST00000569380 LDLRAD1Q5T700 205 aa23.68■■□□□ 1.38
SPSB3-211ENST00000569380 SHISA4Q96DD7 197 aa23.68■■□□□ 1.38
SPSB3-211ENST00000569380 OTUD5Q96G74 571 aa23.68■■□□□ 1.38
SPSB3-211ENST00000569380 KIAA1683Q9H0B3 1180 aa23.68■■□□□ 1.38
SPSB3-211ENST00000569380 AFG3L2Q9Y4W6 797 aa23.68■■□□□ 1.38
SPSB3-211ENST00000569380 TRPM7Q96QT4 1865 aa23.68■■□□□ 1.38
SPSB3-211ENST00000569380 SNAP25P60880 206 aa23.67■■□□□ 1.38
SPSB3-211ENST00000569380 LARP1BQ659C4 914 aaKnown RBP23.67■■□□□ 1.38
SPSB3-211ENST00000569380 GMCL1Q96IK5 515 aa23.67■■□□□ 1.38
SPSB3-211ENST00000569380 BMP3P12645 472 aa23.66■■□□□ 1.38
SPSB3-211ENST00000569380 HMGCS2P54868 508 aa23.66■■□□□ 1.38
SPSB3-211ENST00000569380 DEFB115Q30KQ5 88 aa23.66■■□□□ 1.38
SPSB3-211ENST00000569380 ALG1Q9BT22 464 aa23.66■■□□□ 1.38
SPSB3-211ENST00000569380 AS3MTQ9HBK9 375 aa23.66■■□□□ 1.38
SPSB3-211ENST00000569380 TLL2Q9Y6L7 1015 aa23.66■■□□□ 1.38
SPSB3-211ENST00000569380 STK36Q9NRP7 1315 aa23.66■■□□□ 1.38
SPSB3-211ENST00000569380 PTPRFP10586 1907 aa23.66■■□□□ 1.38
SPSB3-211ENST00000569380 TMEM232C9JQI7 657 aa23.65■■□□□ 1.38
SPSB3-211ENST00000569380 PRPF3O43395 683 aaKnown RBP23.65■■□□□ 1.38
SPSB3-211ENST00000569380 GJA5P36382 358 aa23.65■■□□□ 1.38
SPSB3-211ENST00000569380 GNAQP50148 359 aa23.65■■□□□ 1.38
SPSB3-211ENST00000569380 BACE1P56817 501 aa23.65■■□□□ 1.38
SPSB3-211ENST00000569380 RNF26Q9BY78 433 aaPredicted RBP23.65■■□□□ 1.38
SPSB3-211ENST00000569380 SH2D4AQ9H788 454 aa23.65■■□□□ 1.38
SPSB3-211ENST00000569380 FBXO28Q9NVF7 368 aa23.65■■□□□ 1.38
SPSB3-211ENST00000569380 CHMP5Q9NZZ3 219 aa23.65■■□□□ 1.38
SPSB3-211ENST00000569380 SYNPO2Q9UMS6 1093 aa23.65■■□□□ 1.38
SPSB3-211ENST00000569380 SAMD1Q6SPF0 538 aaPredicted RBP23.65■■□□□ 1.38
SPSB3-211ENST00000569380 HOMER1Q86YM7 354 aa23.65■■□□□ 1.38
SPSB3-211ENST00000569380 TRIM22Q8IYM9 498 aa23.65■■□□□ 1.38
SPSB3-211ENST00000569380 ADGRF4Q8IZF3 695 aa23.65■■□□□ 1.38
SPSB3-211ENST00000569380 PIGSQ96S52 555 aa23.65■■□□□ 1.38
SPSB3-211ENST00000569380 VPS37CA5D8V6 355 aaPredicted RBP23.64■■□□□ 1.37
SPSB3-211ENST00000569380 IRF6O14896 467 aa23.64■■□□□ 1.37
SPSB3-211ENST00000569380 HSPA1AP0DMV8 641 aaKnown RBP23.64■■□□□ 1.37
SPSB3-211ENST00000569380 HSPA1BP0DMV9 641 aaKnown RBP23.64■■□□□ 1.37
SPSB3-211ENST00000569380 GPATCH4Q5T3I0 446 aaKnown RBP23.64■■□□□ 1.37
SPSB3-211ENST00000569380 SAPCD2Q86UD0 394 aa23.64■■□□□ 1.37
SPSB3-211ENST00000569380 OPTNQ96CV9 577 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms