RNA–Protein interactions for RNA: ENST00000569357.4

TCF4-243, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-243ENST00000569357 TOX2Q96NM4 488 aa11.18□□□□□ -0.62
TCF4-243ENST00000569357 RPAP3Q9H6T3 665 aaPredicted RBP11.18□□□□□ -0.62
TCF4-243ENST00000569357 LRP2BPQ9P2M1 347 aa11.18□□□□□ -0.62
TCF4-243ENST00000569357 FBXO3Q9UK99 471 aa11.18□□□□□ -0.62
TCF4-243ENST00000569357 PA2G4Q9UQ80 394 aaKnown RBP11.18□□□□□ -0.62
TCF4-243ENST00000569357 YBX2Q9Y2T7 364 aaKnown RBP11.18□□□□□ -0.62
TCF4-243ENST00000569357 DNAH12Q6ZR08 3092 aa11.17□□□□□ -0.62
TCF4-243ENST00000569357 PDS5AQ29RF7 1337 aaKnown RBP11.17□□□□□ -0.62
TCF4-243ENST00000569357 GPR37L1O60883 481 aa11.17□□□□□ -0.62
TCF4-243ENST00000569357 BAG3O95817 575 aa11.17□□□□□ -0.62
TCF4-243ENST00000569357 HLA-DOAP06340 250 aa11.17□□□□□ -0.62
TCF4-243ENST00000569357 PSEN1P49768 467 aa11.17□□□□□ -0.62
TCF4-243ENST00000569357 MVPQ14764 893 aaKnown RBP11.17□□□□□ -0.62
TCF4-243ENST00000569357 GORABQ5T7V8 394 aa11.17□□□□□ -0.62
TCF4-243ENST00000569357 PPP2R2DQ66LE6 453 aa11.17□□□□□ -0.62
TCF4-243ENST00000569357 PSRC1Q6PGN9 363 aaPredicted RBP11.17□□□□□ -0.62
TCF4-243ENST00000569357 ANKRD33Q7Z3H0 272 aa11.17□□□□□ -0.62
TCF4-243ENST00000569357 WDR63Q8IWG1 891 aa11.17□□□□□ -0.62
TCF4-243ENST00000569357 NUP133Q8WUM0 1156 aa11.17□□□□□ -0.62
TCF4-243ENST00000569357 LENG1Q96BZ8 264 aaPredicted RBP11.17□□□□□ -0.62
TCF4-243ENST00000569357 XAGE2Q96GT9 111 aa11.17□□□□□ -0.62
TCF4-243ENST00000569357 MAML3Q96JK9 1138 aa11.17□□□□□ -0.62
TCF4-243ENST00000569357 UIMC1Q96RL1 719 aa11.17□□□□□ -0.62
TCF4-243ENST00000569357 C11orf16Q9NQ32 467 aa11.17□□□□□ -0.62
TCF4-243ENST00000569357 HMG20BQ9P0W2 317 aa11.17□□□□□ -0.62
TCF4-243ENST00000569357 PLXNA1Q9UIW2 1896 aa11.17□□□□□ -0.62
TCF4-243ENST00000569357 A0A1B0GUL7 405 aa11.16□□□□□ -0.62
TCF4-243ENST00000569357 SMIM22K7EJ46 135 aa11.16□□□□□ -0.62
TCF4-243ENST00000569357 ERC2O15083 957 aa11.16□□□□□ -0.62
TCF4-243ENST00000569357 GTPBP6O43824 516 aaPredicted RBP11.16□□□□□ -0.62
TCF4-243ENST00000569357 ACLYP53396 1101 aa11.16□□□□□ -0.62
TCF4-243ENST00000569357 RABGGTBP53611 331 aa11.16□□□□□ -0.62
TCF4-243ENST00000569357 RASIP1Q5U651 963 aa11.16□□□□□ -0.62
TCF4-243ENST00000569357 ATF7IPQ6VMQ6 1270 aa11.16□□□□□ -0.62
TCF4-243ENST00000569357 LBX2Q6XYB7 198 aa11.16□□□□□ -0.62
TCF4-243ENST00000569357 SPATA5Q8NB90 893 aa11.16□□□□□ -0.62
TCF4-243ENST00000569357 ACER1Q8TDN7 264 aa11.16□□□□□ -0.62
TCF4-243ENST00000569357 HERVK_113Q902F9 699 aa11.16□□□□□ -0.62
TCF4-243ENST00000569357 KHSRPQ92945 711 aaKnown RBP eCLIP11.16□□□□□ -0.622e-6■■■□□ 17.1
TCF4-243ENST00000569357 TANGO6Q9C0B7 1094 aa11.16□□□□□ -0.62
TCF4-243ENST00000569357 SPATC1LQ9H0A9 340 aa11.16□□□□□ -0.62
TCF4-243ENST00000569357 MTIF3Q9H2K0 278 aaKnown RBP11.16□□□□□ -0.62
TCF4-243ENST00000569357 TBX21Q9UL17 535 aa11.16□□□□□ -0.62
TCF4-243ENST00000569357 FLT1P17948 1338 aa11.15□□□□□ -0.62
TCF4-243ENST00000569357 RFXAPO00287 272 aa11.15□□□□□ -0.62
TCF4-243ENST00000569357 FGBP02675 491 aa11.15□□□□□ -0.62
TCF4-243ENST00000569357 MYOGP15173 224 aa11.15□□□□□ -0.62
TCF4-243ENST00000569357 TAL1P17542 331 aaPredicted RBP11.15□□□□□ -0.62
TCF4-243ENST00000569357 NAA16Q6N069 864 aaPredicted RBP11.15□□□□□ -0.62
TCF4-243ENST00000569357 CDCA7LQ96GN5 454 aa11.15□□□□□ -0.62
TCF4-243ENST00000569357 KIAA1683Q9H0B3 1180 aa11.15□□□□□ -0.62
TCF4-243ENST00000569357 UBTFL1P0CB47 393 aaPredicted RBP11.14□□□□□ -0.63
TCF4-243ENST00000569357 FCER1AP12319 257 aa11.14□□□□□ -0.63
TCF4-243ENST00000569357 AKR1A1P14550 325 aa11.14□□□□□ -0.63
TCF4-243ENST00000569357 CYP2C18P33260 490 aa11.14□□□□□ -0.63
TCF4-243ENST00000569357 COG2Q14746 738 aa11.14□□□□□ -0.63
TCF4-243ENST00000569357 OTOP2Q7RTS6 562 aa11.14□□□□□ -0.63
TCF4-243ENST00000569357 METTL16Q86W50 562 aaKnown RBP11.14□□□□□ -0.63
TCF4-243ENST00000569357 SHCBP1Q8NEM2 672 aa11.14□□□□□ -0.63
TCF4-243ENST00000569357 RNF166Q96A37 237 aaPredicted RBP11.14□□□□□ -0.63
TCF4-243ENST00000569357 GLT1D1Q96MS3 346 aa11.14□□□□□ -0.63
TCF4-243ENST00000569357 MROH8Q9H579 483 aa11.14□□□□□ -0.63
TCF4-243ENST00000569357 CERS4Q9HA82 394 aa11.14□□□□□ -0.63
TCF4-243ENST00000569357 CABP5Q9NP86 173 aa11.14□□□□□ -0.63
TCF4-243ENST00000569357 HOXC10Q9NYD6 342 aa11.14□□□□□ -0.63
TCF4-243ENST00000569357 AKAP2Q9Y2D5 859 aa11.14□□□□□ -0.63
TCF4-243ENST00000569357 MYO9BQ13459 2157 aa11.14□□□□□ -0.63
TCF4-243ENST00000569357 MROH7Q68CQ1 1323 aa11.13□□□□□ -0.63
TCF4-243ENST00000569357 ZNF521Q96K83 1311 aa11.13□□□□□ -0.63
TCF4-243ENST00000569357 TLL1O43897 1013 aa11.13□□□□□ -0.63
TCF4-243ENST00000569357 ADAMTS4O75173 837 aa11.13□□□□□ -0.63
TCF4-243ENST00000569357 PGK2P07205 417 aa11.13□□□□□ -0.63
TCF4-243ENST00000569357 TFCP2Q12800 502 aa11.13□□□□□ -0.63
TCF4-243ENST00000569357 KCNA10Q16322 511 aa11.13□□□□□ -0.63
TCF4-243ENST00000569357 ABCB5Q2M3G0 1257 aa11.13□□□□□ -0.63
TCF4-243ENST00000569357 CERKLQ49MI3 558 aaPredicted RBP11.13□□□□□ -0.63
TCF4-243ENST00000569357 TINF2Q9BSI4 451 aa11.13□□□□□ -0.63
TCF4-243ENST00000569357 TSEN34Q9BSV6 310 aaKnown RBP11.13□□□□□ -0.63
TCF4-243ENST00000569357 IL23AQ9NPF7 189 aa11.13□□□□□ -0.63
TCF4-243ENST00000569357 NRBP1Q9UHY1 535 aa11.13□□□□□ -0.63
TCF4-243ENST00000569357 COG5Q9UP83 839 aa11.13□□□□□ -0.63
TCF4-243ENST00000569357 CNPY2Q9Y2B0 182 aa11.13□□□□□ -0.63
TCF4-243ENST00000569357 ZBBXA8MT70 800 aa11.12□□□□□ -0.63
TCF4-243ENST00000569357 TLR3O15455 904 aaKnown RBP11.12□□□□□ -0.63
TCF4-243ENST00000569357 HOXB1P14653 301 aaPredicted RBP11.12□□□□□ -0.63
TCF4-243ENST00000569357 CSPP1Q1MSJ5 1256 aa11.12□□□□□ -0.63
TCF4-243ENST00000569357 CCDC184Q52MB2 194 aa11.12□□□□□ -0.63
TCF4-243ENST00000569357 KRT40Q6A162 431 aa11.12□□□□□ -0.63
TCF4-243ENST00000569357 MRPL50Q8N5N7 158 aaKnown RBP11.12□□□□□ -0.63
TCF4-243ENST00000569357 HLA-CQ95604 372 aa11.12□□□□□ -0.63
TCF4-243ENST00000569357 MMP19Q99542 508 aa11.12□□□□□ -0.63
TCF4-243ENST00000569357 SNRKQ9NRH2 765 aa11.12□□□□□ -0.63
TCF4-243ENST00000569357 MTCH2Q9Y6C9 303 aa11.12□□□□□ -0.63
TCF4-243ENST00000569357 SLC4A7Q9Y6M7 1214 aa11.12□□□□□ -0.63
TCF4-243ENST00000569357 PTPRCP08575 1304 aa11.11□□□□□ -0.63
TCF4-243ENST00000569357 SYNRGQ9UMZ2 1314 aa11.11□□□□□ -0.63
TCF4-243ENST00000569357 MYADML2A6NDP7 307 aa11.11□□□□□ -0.63
TCF4-243ENST00000569357 MOXD2PA6NHM9 499 aa11.11□□□□□ -0.63
TCF4-243ENST00000569357 PRR33A8MZF0 331 aa11.11□□□□□ -0.63
TCF4-243ENST00000569357 PI4K2BG5E9Z4 385 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms