RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 HSPA4P34932 840 aa11.09□□□□□ -0.63
UBR1-210ENST00000569337 TFAP4Q01664 338 aa11.09□□□□□ -0.63
UBR1-210ENST00000569337 CTDSPL2Q05D32 466 aa11.09□□□□□ -0.63
UBR1-210ENST00000569337 COL9A3Q14050 684 aaPredicted RBP11.09□□□□□ -0.63
UBR1-210ENST00000569337 WDR78Q5VTH9 848 aa11.09□□□□□ -0.63
UBR1-210ENST00000569337 CREB3L3Q68CJ9 461 aa11.09□□□□□ -0.63
UBR1-210ENST00000569337 GPR142Q7Z601 462 aa11.09□□□□□ -0.63
UBR1-210ENST00000569337 PLEKHH3Q7Z736 793 aa11.09□□□□□ -0.63
UBR1-210ENST00000569337 TBC1D10CQ8IV04 446 aa11.09□□□□□ -0.63
UBR1-210ENST00000569337 MB21D1Q8N884 522 aa11.09□□□□□ -0.63
UBR1-210ENST00000569337 SOCS4Q8WXH5 440 aa11.09□□□□□ -0.63
UBR1-210ENST00000569337 KCNB2Q92953 911 aa11.09□□□□□ -0.63
UBR1-210ENST00000569337 RNF208Q9H0X6 261 aa11.09□□□□□ -0.63
UBR1-210ENST00000569337 BTBD7Q9P203 1132 aa11.09□□□□□ -0.63
UBR1-210ENST00000569337 ZSWIM8A7E2V4 1837 aa11.08□□□□□ -0.64
UBR1-210ENST00000569337 IGKV6D-41A0A0C4DH26 115 aa11.08□□□□□ -0.64
UBR1-210ENST00000569337 TSPY2A6NKD2 308 aa11.08□□□□□ -0.64
UBR1-210ENST00000569337 F5H6K3 240 aa11.08□□□□□ -0.64
UBR1-210ENST00000569337 EPB41L2O43491 1005 aaKnown RBP11.08□□□□□ -0.64
UBR1-210ENST00000569337 TTLL1O95922 423 aa11.08□□□□□ -0.64
UBR1-210ENST00000569337 INHAP05111 366 aa11.08□□□□□ -0.64
UBR1-210ENST00000569337 GJB1P08034 283 aa11.08□□□□□ -0.64
UBR1-210ENST00000569337 KLRC3Q07444 240 aa11.08□□□□□ -0.64
UBR1-210ENST00000569337 PLS1Q14651 629 aa11.08□□□□□ -0.64
UBR1-210ENST00000569337 FAM47AQ5JRC9 791 aa11.08□□□□□ -0.64
UBR1-210ENST00000569337 STOX1Q6ZVD7 989 aa11.08□□□□□ -0.64
UBR1-210ENST00000569337 NEDD1Q8NHV4 660 aa11.08□□□□□ -0.64
UBR1-210ENST00000569337 ATG4CQ96DT6 458 aa11.08□□□□□ -0.64
UBR1-210ENST00000569337 CEP95Q96GE4 821 aa11.08□□□□□ -0.64
UBR1-210ENST00000569337 MTMR4Q9NYA4 1195 aa11.08□□□□□ -0.64
UBR1-210ENST00000569337 ANAPC4Q9UJX5 808 aa11.08□□□□□ -0.64
UBR1-210ENST00000569337 IVNS1ABPQ9Y6Y0 642 aa11.08□□□□□ -0.64
UBR1-210ENST00000569337 HMGCRP04035 888 aa11.07□□□□□ -0.64
UBR1-210ENST00000569337 XRCC5P13010 732 aaKnown RBP11.07□□□□□ -0.64
UBR1-210ENST00000569337 RGS2P41220 211 aa11.07□□□□□ -0.64
UBR1-210ENST00000569337 IMMTQ16891 758 aaKnown RBP11.07□□□□□ -0.64
UBR1-210ENST00000569337 PPP4R3BQ5MIZ7 849 aa11.07□□□□□ -0.64
UBR1-210ENST00000569337 MORN1Q5T089 497 aa11.07□□□□□ -0.64
UBR1-210ENST00000569337 FAM83BQ5T0W9 1011 aa11.07□□□□□ -0.64
UBR1-210ENST00000569337 TRMT44Q8IYL2 757 aaKnown RBP11.07□□□□□ -0.64
UBR1-210ENST00000569337 MKL1Q969V6 931 aa11.07□□□□□ -0.64
UBR1-210ENST00000569337 SPATC1LQ9H0A9 340 aa11.07□□□□□ -0.64
UBR1-210ENST00000569337 UNC93B1Q9H1C4 597 aa11.07□□□□□ -0.64
UBR1-210ENST00000569337 TOMM22Q9NS69 142 aa11.07□□□□□ -0.64
UBR1-210ENST00000569337 FBXO28Q9NVF7 368 aa11.07□□□□□ -0.64
UBR1-210ENST00000569337 CTNNA3Q9UI47 895 aa11.07□□□□□ -0.64
UBR1-210ENST00000569337 SNX14Q9Y5W7 946 aa11.07□□□□□ -0.64
UBR1-210ENST00000569337 NEDD4P46934 1319 aa11.07□□□□□ -0.64
UBR1-210ENST00000569337 CENPFP49454 3210 aa11.06□□□□□ -0.64
UBR1-210ENST00000569337 SLC15A5A6NIM6 579 aa11.06□□□□□ -0.64
UBR1-210ENST00000569337 ZNF213O14771 459 aa11.06□□□□□ -0.64
UBR1-210ENST00000569337 RANBP6O60518 1105 aaKnown RBP11.06□□□□□ -0.64
UBR1-210ENST00000569337 NDUFB10O96000 172 aa11.06□□□□□ -0.64
UBR1-210ENST00000569337 FGRP09769 529 aa11.06□□□□□ -0.64
UBR1-210ENST00000569337 PTPREP23469 700 aa11.06□□□□□ -0.64
UBR1-210ENST00000569337 GJA8P48165 433 aa11.06□□□□□ -0.64
UBR1-210ENST00000569337 MAP2K5Q13163 448 aa11.06□□□□□ -0.64
UBR1-210ENST00000569337 ADCK5Q3MIX3 580 aa11.06□□□□□ -0.64
UBR1-210ENST00000569337 USP6NLQ92738 828 aa11.06□□□□□ -0.64
UBR1-210ENST00000569337 NUP88Q99567 741 aaPredicted RBP11.06□□□□□ -0.64
UBR1-210ENST00000569337 KIF2CQ99661 725 aa11.06□□□□□ -0.64
UBR1-210ENST00000569337 MOV10L1Q9BXT6 1211 aaKnown RBP11.06□□□□□ -0.64
UBR1-210ENST00000569337 C22orf23Q9BZE7 217 aa11.06□□□□□ -0.64
UBR1-210ENST00000569337 PPP1R9AQ9ULJ8 1098 aa11.06□□□□□ -0.64
UBR1-210ENST00000569337 SYNPO2Q9UMS6 1093 aa11.06□□□□□ -0.64
UBR1-210ENST00000569337 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.06□□□□□ -0.64
UBR1-210ENST00000569337 GREB1LQ9C091 1923 aaPredicted RBP11.05□□□□□ -0.64
UBR1-210ENST00000569337 E7EWF7 191 aa11.05□□□□□ -0.64
UBR1-210ENST00000569337 VWA5AO00534 786 aa11.05□□□□□ -0.64
UBR1-210ENST00000569337 STRNO43815 780 aa11.05□□□□□ -0.64
UBR1-210ENST00000569337 ORC4O43929 436 aa11.05□□□□□ -0.64
UBR1-210ENST00000569337 SGPL1O95470 568 aa11.05□□□□□ -0.64
UBR1-210ENST00000569337 ZKSCAN1P17029 563 aaPredicted RBP11.05□□□□□ -0.64
UBR1-210ENST00000569337 ERCC3P19447 782 aa11.05□□□□□ -0.64
UBR1-210ENST00000569337 RBM25P49756 843 aaKnown RBP11.05□□□□□ -0.64
UBR1-210ENST00000569337 TSGA10IPQ3SY00 556 aa11.05□□□□□ -0.64
UBR1-210ENST00000569337 RRP12Q5JTH9 1297 aaKnown RBP11.05□□□□□ -0.64
UBR1-210ENST00000569337 AKNAD1Q5T1N1 836 aa11.05□□□□□ -0.64
UBR1-210ENST00000569337 NCAPG2Q86XI2 1143 aa11.05□□□□□ -0.64
UBR1-210ENST00000569337 LRRC47Q8N1G4 583 aaKnown RBP11.05□□□□□ -0.64
UBR1-210ENST00000569337 PRPF38AQ8NAV1 312 aaKnown RBP11.05□□□□□ -0.64
UBR1-210ENST00000569337 GMCL1P1Q8NEA9 526 aa11.05□□□□□ -0.64
UBR1-210ENST00000569337 SHCBP1Q8NEM2 672 aa11.05□□□□□ -0.64
UBR1-210ENST00000569337 U2AF1L4Q8WU68 220 aaKnown RBP11.05□□□□□ -0.64
UBR1-210ENST00000569337 TRIB2Q92519 343 aa11.05□□□□□ -0.64
UBR1-210ENST00000569337 IL17RAQ96F46 866 aa11.05□□□□□ -0.64
UBR1-210ENST00000569337 TBC1D32Q96NH3 1257 aa11.05□□□□□ -0.64
UBR1-210ENST00000569337 DEFB118Q96PH6 123 aa11.05□□□□□ -0.64
UBR1-210ENST00000569337 APBA2Q99767 749 aa11.05□□□□□ -0.64
UBR1-210ENST00000569337 MROH8Q9H579 483 aa11.05□□□□□ -0.64
UBR1-210ENST00000569337 HMX1Q9NP08 348 aaPredicted RBP11.05□□□□□ -0.64
UBR1-210ENST00000569337 STX8Q9UNK0 236 aa11.05□□□□□ -0.64
UBR1-210ENST00000569337 CTDP1Q9Y5B0 961 aaPredicted RBP11.05□□□□□ -0.64
UBR1-210ENST00000569337 RPTORQ8N122 1335 aa11.05□□□□□ -0.64
UBR1-210ENST00000569337 PLIN4Q96Q06 1357 aa11.04□□□□□ -0.64
UBR1-210ENST00000569337 EIF5BO60841 1220 aaKnown RBP11.04□□□□□ -0.64
UBR1-210ENST00000569337 SLC25A27O95847 323 aa11.04□□□□□ -0.64
UBR1-210ENST00000569337 TFRCP02786 760 aaKnown RBP11.04□□□□□ -0.64
UBR1-210ENST00000569337 CPA1P15085 419 aa11.04□□□□□ -0.64
UBR1-210ENST00000569337 CAPN2P17655 700 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms