RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 MYPNQ86TC9 1320 aa10.67□□□□□ -0.7
CHD9-219ENST00000569225 CCDC69A6NI79 296 aa10.67□□□□□ -0.7
CHD9-219ENST00000569225 FLOT1O75955 427 aa10.67□□□□□ -0.7
CHD9-219ENST00000569225 EXOSC10Q01780 885 aaKnown RBP10.67□□□□□ -0.7
CHD9-219ENST00000569225 CRHR2Q13324 411 aa10.67□□□□□ -0.7
CHD9-219ENST00000569225 COG2Q14746 738 aa10.67□□□□□ -0.7
CHD9-219ENST00000569225 KIAA1755Q5JYT7 1200 aa10.67□□□□□ -0.7
CHD9-219ENST00000569225 SYNE3Q6ZMZ3 975 aa10.67□□□□□ -0.7
CHD9-219ENST00000569225 RUFY3Q7L099 469 aa10.67□□□□□ -0.7
CHD9-219ENST00000569225 BACH2Q9BYV9 841 aa10.67□□□□□ -0.7
CHD9-219ENST00000569225 LY9Q9HBG7 655 aa10.67□□□□□ -0.7
CHD9-219ENST00000569225 FEM1BQ9UK73 627 aa10.67□□□□□ -0.7
CHD9-219ENST00000569225 MTMR7Q9Y216 660 aa10.67□□□□□ -0.7
CHD9-219ENST00000569225 CEP350Q5VT06 3117 aa10.66□□□□□ -0.7
CHD9-219ENST00000569225 TLR2O60603 784 aa10.66□□□□□ -0.7
CHD9-219ENST00000569225 CYP2C8P10632 490 aa10.66□□□□□ -0.7
CHD9-219ENST00000569225 IKQ13123 557 aaPredicted RBP10.66□□□□□ -0.7
CHD9-219ENST00000569225 GPATCH4Q5T3I0 446 aaKnown RBP10.66□□□□□ -0.7
CHD9-219ENST00000569225 FAM160B2Q86V87 743 aa10.66□□□□□ -0.7
CHD9-219ENST00000569225 CHURC1Q8WUH1 139 aa10.66□□□□□ -0.7
CHD9-219ENST00000569225 IL17RAQ96F46 866 aa10.66□□□□□ -0.7
CHD9-219ENST00000569225 NUP88Q99567 741 aaPredicted RBP10.66□□□□□ -0.7
CHD9-219ENST00000569225 SLF1Q9BQI6 1058 aa10.66□□□□□ -0.7
CHD9-219ENST00000569225 SLC12A7Q9Y666 1083 aa10.66□□□□□ -0.7
CHD9-219ENST00000569225 PHIPQ8WWQ0 1821 aa10.66□□□□□ -0.7
CHD9-219ENST00000569225 DDAH1O94760 285 aa10.66□□□□□ -0.7
CHD9-219ENST00000569225 TBC1D8O95759 1140 aa10.66□□□□□ -0.7
CHD9-219ENST00000569225 PARP1P09874 1014 aaKnown RBP10.66□□□□□ -0.7
CHD9-219ENST00000569225 CALM1P0DP23 149 aa10.66□□□□□ -0.7
CHD9-219ENST00000569225 CALM2P0DP24 149 aa10.66□□□□□ -0.7
CHD9-219ENST00000569225 CALM3P0DP25 149 aa10.66□□□□□ -0.7
CHD9-219ENST00000569225 PDHBP11177 359 aa10.66□□□□□ -0.7
CHD9-219ENST00000569225 RBM25P49756 843 aaKnown RBP10.66□□□□□ -0.7
CHD9-219ENST00000569225 STAT2P52630 851 aa10.66□□□□□ -0.7
CHD9-219ENST00000569225 HERVK_113P62684 666 aa10.66□□□□□ -0.7
CHD9-219ENST00000569225 ASPRV1Q53RT3 343 aa10.66□□□□□ -0.7
CHD9-219ENST00000569225 NOM1Q5C9Z4 860 aaKnown RBP10.66□□□□□ -0.7
CHD9-219ENST00000569225 SGMS1Q86VZ5 419 aa10.66□□□□□ -0.7
CHD9-219ENST00000569225 MB21D1Q8N884 522 aa10.66□□□□□ -0.7
CHD9-219ENST00000569225 P2RX7Q99572 595 aaKnown RBP10.66□□□□□ -0.7
CHD9-219ENST00000569225 LRRC2Q9BYS8 371 aa10.66□□□□□ -0.7
CHD9-219ENST00000569225 CTDP1Q9Y5B0 961 aaPredicted RBP10.66□□□□□ -0.7
CHD9-219ENST00000569225 TMEM232C9JQI7 657 aa10.65□□□□□ -0.7
CHD9-219ENST00000569225 PLA2G6O60733 806 aa10.65□□□□□ -0.7
CHD9-219ENST00000569225 HSPA1AP0DMV8 641 aaKnown RBP10.65□□□□□ -0.7
CHD9-219ENST00000569225 HSPA1BP0DMV9 641 aaKnown RBP10.65□□□□□ -0.7
CHD9-219ENST00000569225 SNHG28P0DPA3 235 aa10.65□□□□□ -0.7
CHD9-219ENST00000569225 FDX1P10109 184 aa10.65□□□□□ -0.7
CHD9-219ENST00000569225 KIF5BP33176 963 aa10.65□□□□□ -0.7
CHD9-219ENST00000569225 CTCFP49711 727 aaPredicted RBP10.65□□□□□ -0.7
CHD9-219ENST00000569225 ZNF543Q08ER8 600 aa10.65□□□□□ -0.7
CHD9-219ENST00000569225 LBX2Q6XYB7 198 aa10.65□□□□□ -0.7
CHD9-219ENST00000569225 Q6ZUG5 572 aa10.65□□□□□ -0.7
CHD9-219ENST00000569225 ZNF654Q8IZM8 581 aa10.65□□□□□ -0.7
CHD9-219ENST00000569225 FBXL16Q8N461 479 aa10.65□□□□□ -0.7
CHD9-219ENST00000569225 PRPF38AQ8NAV1 312 aaKnown RBP10.65□□□□□ -0.7
CHD9-219ENST00000569225 TCEANC2Q96MN5 208 aa10.65□□□□□ -0.7
CHD9-219ENST00000569225 MAP3K14Q99558 947 aa10.65□□□□□ -0.7
CHD9-219ENST00000569225 UPF3BQ9BZI7 483 aaKnown RBP10.65□□□□□ -0.7
CHD9-219ENST00000569225 PDRG1Q9NUG6 133 aa10.65□□□□□ -0.7
CHD9-219ENST00000569225 PPP1R9AQ9ULJ8 1098 aa10.65□□□□□ -0.7
CHD9-219ENST00000569225 LOC285556D6RIA3 1793 aa10.65□□□□□ -0.7
CHD9-219ENST00000569225 CPA1P15085 419 aa10.64□□□□□ -0.71
CHD9-219ENST00000569225 DSG3P32926 999 aa10.64□□□□□ -0.71
CHD9-219ENST00000569225 ANKRD1Q15327 319 aa10.64□□□□□ -0.71
CHD9-219ENST00000569225 SAMD1Q6SPF0 538 aaPredicted RBP10.64□□□□□ -0.71
CHD9-219ENST00000569225 KCTD1Q719H9 257 aa10.64□□□□□ -0.71
CHD9-219ENST00000569225 IL27Q8NEV9 243 aa10.64□□□□□ -0.71
CHD9-219ENST00000569225 CTCFLQ8NI51 663 aaPredicted RBP10.64□□□□□ -0.71
CHD9-219ENST00000569225 KIFC2Q96AC6 838 aa10.64□□□□□ -0.71
CHD9-219ENST00000569225 CHMP4CQ96CF2 233 aa10.64□□□□□ -0.71
CHD9-219ENST00000569225 GPHNQ9NQX3 736 aaPredicted RBP10.64□□□□□ -0.71
CHD9-219ENST00000569225 RABGAP1Q9Y3P9 1069 aa10.64□□□□□ -0.71
CHD9-219ENST00000569225 FRMPD2Q68DX3 1309 aaPredicted RBP10.64□□□□□ -0.71
CHD9-219ENST00000569225 ADGRA2Q96PE1 1338 aa10.64□□□□□ -0.71
CHD9-219ENST00000569225 SPDYE16A6NNV3 312 aaPredicted RBP10.64□□□□□ -0.71
CHD9-219ENST00000569225 GPR25O00155 361 aa10.64□□□□□ -0.71
CHD9-219ENST00000569225 ZBED4O75132 1171 aa10.64□□□□□ -0.71
CHD9-219ENST00000569225 GNAQP50148 359 aa10.64□□□□□ -0.71
CHD9-219ENST00000569225 RCAN1P53805 252 aa10.64□□□□□ -0.71
CHD9-219ENST00000569225 CCNA1P78396 465 aa10.64□□□□□ -0.71
CHD9-219ENST00000569225 TROAPQ12815 778 aa10.64□□□□□ -0.71
CHD9-219ENST00000569225 GRM4Q14833 912 aa10.64□□□□□ -0.71
CHD9-219ENST00000569225 FAM110CQ1W6H9 321 aa10.64□□□□□ -0.71
CHD9-219ENST00000569225 C17orf99Q6UX52 265 aa10.64□□□□□ -0.71
CHD9-219ENST00000569225 GPRC5AQ8NFJ5 357 aa10.64□□□□□ -0.71
CHD9-219ENST00000569225 NUP133Q8WUM0 1156 aa10.64□□□□□ -0.71
CHD9-219ENST00000569225 BRF1Q92994 677 aa10.64□□□□□ -0.71
CHD9-219ENST00000569225 SENP2Q9HC62 589 aa10.64□□□□□ -0.71
CHD9-219ENST00000569225 GPCPD1Q9NPB8 672 aa10.64□□□□□ -0.71
CHD9-219ENST00000569225 FBXO28Q9NVF7 368 aa10.64□□□□□ -0.71
CHD9-219ENST00000569225 CPA4Q9UI42 421 aa10.64□□□□□ -0.71
CHD9-219ENST00000569225 KLF18A0A0U1RQI7 1052 aa10.63□□□□□ -0.71
CHD9-219ENST00000569225 ZBTB43O43298 467 aa10.63□□□□□ -0.71
CHD9-219ENST00000569225 COL9A3Q14050 684 aaPredicted RBP10.63□□□□□ -0.71
CHD9-219ENST00000569225 KIF22Q14807 665 aa10.63□□□□□ -0.71
CHD9-219ENST00000569225 ARHGEF6Q15052 776 aa10.63□□□□□ -0.71
CHD9-219ENST00000569225 SYDE2Q5VT97 1194 aa10.63□□□□□ -0.71
CHD9-219ENST00000569225 BTNL9Q6UXG8 535 aa10.63□□□□□ -0.71
CHD9-219ENST00000569225 CCAR1Q8IX12 1150 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms