RNA–Protein interactions for RNA: ENST00000569053.5

TMX3-210, Transcript of thioredoxin related transmembrane protein 3, humanhuman

TSL 1 (best)

Gene TMX3, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMX3-210ENST00000569053 DPP9Q86TI2 863 aa13.15□□□□□ -0.3
TMX3-210ENST00000569053 IFNLR1Q8IU57 520 aaPredicted RBP13.15□□□□□ -0.3
TMX3-210ENST00000569053 ERC1Q8IUD2 1116 aa13.15□□□□□ -0.3
TMX3-210ENST00000569053 SHCBP1Q8NEM2 672 aa13.15□□□□□ -0.3
TMX3-210ENST00000569053 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.15□□□□□ -0.3
TMX3-210ENST00000569053 FERMT2Q96AC1 680 aa13.15□□□□□ -0.3
TMX3-210ENST00000569053 TRIM43Q96BQ3 446 aaPredicted RBP13.15□□□□□ -0.3
TMX3-210ENST00000569053 MAML3Q96JK9 1138 aa13.15□□□□□ -0.3
TMX3-210ENST00000569053 HOXC10Q9NYD6 342 aa13.15□□□□□ -0.3
TMX3-210ENST00000569053 ADAMTS5Q9UNA0 930 aa13.15□□□□□ -0.3
TMX3-210ENST00000569053 ATP11BQ9Y2G3 1177 aa13.15□□□□□ -0.3
TMX3-210ENST00000569053 IVNS1ABPQ9Y6Y0 642 aa13.15□□□□□ -0.3
TMX3-210ENST00000569053 PLXNA1Q9UIW2 1896 aa13.14□□□□□ -0.31
TMX3-210ENST00000569053 MYH7P12883 1935 aa13.14□□□□□ -0.31
TMX3-210ENST00000569053 GREB1LQ9C091 1923 aaPredicted RBP13.14□□□□□ -0.31
TMX3-210ENST00000569053 PGK2P07205 417 aa13.14□□□□□ -0.31
TMX3-210ENST00000569053 ADCYAP1R1P41586 468 aa13.14□□□□□ -0.31
TMX3-210ENST00000569053 CDK8P49336 464 aa13.14□□□□□ -0.31
TMX3-210ENST00000569053 EPHB4P54760 987 aa13.14□□□□□ -0.31
TMX3-210ENST00000569053 SNX17Q15036 470 aa13.14□□□□□ -0.31
TMX3-210ENST00000569053 LRRC41Q15345 812 aa13.14□□□□□ -0.31
TMX3-210ENST00000569053 C12orf60Q5U649 245 aa13.14□□□□□ -0.31
TMX3-210ENST00000569053 TMEM179Q6ZVK1 233 aa13.14□□□□□ -0.31
TMX3-210ENST00000569053 NCAPG2Q86XI2 1143 aa13.14□□□□□ -0.31
TMX3-210ENST00000569053 REPS2Q8NFH8 660 aa13.14□□□□□ -0.31
TMX3-210ENST00000569053 BADQ92934 168 aa13.14□□□□□ -0.31
TMX3-210ENST00000569053 LENG1Q96BZ8 264 aaPredicted RBP13.14□□□□□ -0.31
TMX3-210ENST00000569053 DCBLD2Q96PD2 775 aa13.14□□□□□ -0.31
TMX3-210ENST00000569053 COL25A1Q9BXS0 654 aaPredicted RBP13.14□□□□□ -0.31
TMX3-210ENST00000569053 VCPKMTQ9H867 229 aa13.14□□□□□ -0.31
TMX3-210ENST00000569053 PDLIM7Q9NR12 457 aa13.14□□□□□ -0.31
TMX3-210ENST00000569053 ZBTB40Q9NUA8 1239 aa13.14□□□□□ -0.31
TMX3-210ENST00000569053 COG6Q9Y2V7 657 aa13.14□□□□□ -0.31
TMX3-210ENST00000569053 USP17L12C9JPN9 530 aa13.13□□□□□ -0.31
TMX3-210ENST00000569053 USP17L21D6R901 530 aa13.13□□□□□ -0.31
TMX3-210ENST00000569053 SEPT4O43236 478 aa13.13□□□□□ -0.31
TMX3-210ENST00000569053 STRNO43815 780 aa13.13□□□□□ -0.31
TMX3-210ENST00000569053 MSCO60682 206 aa13.13□□□□□ -0.31
TMX3-210ENST00000569053 FLOT1O75955 427 aa13.13□□□□□ -0.31
TMX3-210ENST00000569053 EEF2P13639 858 aaKnown RBP13.13□□□□□ -0.31
TMX3-210ENST00000569053 IRX5P78411 483 aaPredicted RBP13.13□□□□□ -0.31
TMX3-210ENST00000569053 PLS1Q14651 629 aa13.13□□□□□ -0.31
TMX3-210ENST00000569053 TTF1Q15361 905 aaPredicted RBP13.13□□□□□ -0.31
TMX3-210ENST00000569053 TMED8Q6PL24 325 aaPredicted RBP13.13□□□□□ -0.31
TMX3-210ENST00000569053 KIF1BPQ96EK5 621 aa13.13□□□□□ -0.31
TMX3-210ENST00000569053 PUS7LQ9H0K6 701 aaKnown RBP13.13□□□□□ -0.31
TMX3-210ENST00000569053 PAG1Q9NWQ8 432 aa13.13□□□□□ -0.31
TMX3-210ENST00000569053 PRUNE2Q8WUY3 3088 aa13.13□□□□□ -0.31
TMX3-210ENST00000569053 ZBED9Q6R2W3 1325 aa13.13□□□□□ -0.31
TMX3-210ENST00000569053 SPTBN5Q9NRC6 3674 aaKnown RBP13.12□□□□□ -0.31
TMX3-210ENST00000569053 ICA1Q05084 483 aa13.12□□□□□ -0.31
TMX3-210ENST00000569053 ZNF792Q3KQV3 632 aa13.12□□□□□ -0.31
TMX3-210ENST00000569053 FAM109BQ6ICB4 259 aaPredicted RBP13.12□□□□□ -0.31
TMX3-210ENST00000569053 CTR9Q6PD62 1173 aa13.12□□□□□ -0.31
TMX3-210ENST00000569053 C16orf86Q6ZW13 317 aa13.12□□□□□ -0.31
TMX3-210ENST00000569053 CLASRPQ8N2M8 674 aaKnown RBP13.12□□□□□ -0.31
TMX3-210ENST00000569053 TTYH1Q9H313 450 aaPredicted RBP13.12□□□□□ -0.31
TMX3-210ENST00000569053 SWAP70Q9UH65 585 aa13.12□□□□□ -0.31
TMX3-210ENST00000569053 FARP1Q9Y4F1 1045 aaPredicted RBP13.12□□□□□ -0.31
TMX3-210ENST00000569053 SMARCA5O60264 1052 aaPredicted RBP13.11□□□□□ -0.31
TMX3-210ENST00000569053 PGK1P00558 417 aa13.11□□□□□ -0.31
TMX3-210ENST00000569053 IFIT2P09913 472 aaKnown RBP13.11□□□□□ -0.31
TMX3-210ENST00000569053 ZNF865P0CJ78 1059 aaPredicted RBP13.11□□□□□ -0.31
TMX3-210ENST00000569053 ATP5JP18859 108 aa13.11□□□□□ -0.31
TMX3-210ENST00000569053 TLE2Q04725 743 aa13.11□□□□□ -0.31
TMX3-210ENST00000569053 ABRAQ8N0Z2 381 aa13.11□□□□□ -0.31
TMX3-210ENST00000569053 ARRDC4Q8NCT1 418 aa13.11□□□□□ -0.31
TMX3-210ENST00000569053 NUP88Q99567 741 aaPredicted RBP13.11□□□□□ -0.31
TMX3-210ENST00000569053 HAUS7Q99871 368 aa13.11□□□□□ -0.31
TMX3-210ENST00000569053 LBHD1Q9BQE6 289 aaPredicted RBP13.11□□□□□ -0.31
TMX3-210ENST00000569053 MROH8Q9H579 483 aa13.11□□□□□ -0.31
TMX3-210ENST00000569053 PRDM5Q9NQX1 630 aaPredicted RBP13.11□□□□□ -0.31
TMX3-210ENST00000569053 ZNF214Q9UL59 606 aaPredicted RBP13.11□□□□□ -0.31
TMX3-210ENST00000569053 RIPK3Q9Y572 518 aa13.11□□□□□ -0.31
TMX3-210ENST00000569053 WDR46O15213 610 aaKnown RBP13.1□□□□□ -0.31
TMX3-210ENST00000569053 HSP90AB4PQ58FF6 505 aa13.1□□□□□ -0.31
TMX3-210ENST00000569053 FAM83BQ5T0W9 1011 aa13.1□□□□□ -0.31
TMX3-210ENST00000569053 C20orf194Q5TEA3 1177 aa13.1□□□□□ -0.31
TMX3-210ENST00000569053 RIOX2Q8IUF8 465 aa13.1□□□□□ -0.31
TMX3-210ENST00000569053 RPAP2Q8IXW5 612 aaPredicted RBP13.1□□□□□ -0.31
TMX3-210ENST00000569053 STK11IPQ8N1F8 1099 aa13.1□□□□□ -0.31
TMX3-210ENST00000569053 MB21D1Q8N884 522 aa13.1□□□□□ -0.31
TMX3-210ENST00000569053 CDX2Q99626 313 aaPredicted RBP13.1□□□□□ -0.31
TMX3-210ENST00000569053 ATP8A2Q9NTI2 1148 aa13.1□□□□□ -0.31
TMX3-210ENST00000569053 PHF24Q9UPV7 400 aa13.1□□□□□ -0.31
TMX3-210ENST00000569053 MCM3APO60318 1980 aa13.09□□□□□ -0.31
TMX3-210ENST00000569053 MYADML2A6NDP7 307 aa13.09□□□□□ -0.31
TMX3-210ENST00000569053 KBTBD13C9JR72 458 aa13.09□□□□□ -0.31
TMX3-210ENST00000569053 VWA5AO00534 786 aa13.09□□□□□ -0.31
TMX3-210ENST00000569053 ADCY6O43306 1168 aa13.09□□□□□ -0.31
TMX3-210ENST00000569053 FCER1AP12319 257 aa13.09□□□□□ -0.31
TMX3-210ENST00000569053 C1orf53Q5VUE5 145 aa13.09□□□□□ -0.31
TMX3-210ENST00000569053 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.09□□□□□ -0.31
TMX3-210ENST00000569053 FGD4Q96M96 766 aa13.09□□□□□ -0.31
TMX3-210ENST00000569053 MMP19Q99542 508 aa13.09□□□□□ -0.31
TMX3-210ENST00000569053 SEMA6BQ9H3T3 888 aa13.09□□□□□ -0.31
TMX3-210ENST00000569053 ARHGEF10LQ9HCE6 1279 aa13.09□□□□□ -0.31
TMX3-210ENST00000569053 PPP1R9AQ9ULJ8 1098 aa13.09□□□□□ -0.31
TMX3-210ENST00000569053 SLC4A4Q9Y6R1 1079 aa13.09□□□□□ -0.31
TMX3-210ENST00000569053 GSG1L2A8MUP6 293 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms