RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 ATF4P18848 351 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P6-201ENST00000569046 GUCY2CP25092 1073 aa5.39□□□□□ -1.55
HMGB1P6-201ENST00000569046 RNF4P78317 190 aa5.39□□□□□ -1.55
HMGB1P6-201ENST00000569046 TDRD10Q5VZ19 366 aaKnown RBP5.39□□□□□ -1.55
HMGB1P6-201ENST00000569046 UNC5AQ6ZN44 842 aa5.39□□□□□ -1.55
HMGB1P6-201ENST00000569046 TMPRSS7Q7RTY8 843 aa5.39□□□□□ -1.55
HMGB1P6-201ENST00000569046 PPFIBP1Q86W92 1011 aa5.39□□□□□ -1.55
HMGB1P6-201ENST00000569046 CREG2Q8IUH2 290 aa5.39□□□□□ -1.55
HMGB1P6-201ENST00000569046 TAB3Q8N5C8 712 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P6-201ENST00000569046 SEC16BQ96JE7 1060 aa5.39□□□□□ -1.55
HMGB1P6-201ENST00000569046 SRRTQ9BXP5 876 aaKnown RBP5.39□□□□□ -1.55
HMGB1P6-201ENST00000569046 PRDM14Q9GZV8 571 aa5.39□□□□□ -1.55
HMGB1P6-201ENST00000569046 TRIT1Q9H3H1 467 aaKnown RBP5.39□□□□□ -1.55
HMGB1P6-201ENST00000569046 GPATCH2Q9NW75 528 aa5.39□□□□□ -1.55
HMGB1P6-201ENST00000569046 DUSP13Q9UII6 198 aa5.39□□□□□ -1.55
HMGB1P6-201ENST00000569046 MINPP1Q9UNW1 487 aa5.39□□□□□ -1.55
HMGB1P6-201ENST00000569046 LTBP3Q9NS15 1303 aa5.39□□□□□ -1.55
HMGB1P6-201ENST00000569046 ZNF608Q9ULD9 1512 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P6-201ENST00000569046 DNAJC25-GNG10A0A024R161 153 aa5.38□□□□□ -1.55
HMGB1P6-201ENST00000569046 SHOXO15266 292 aa5.38□□□□□ -1.55
HMGB1P6-201ENST00000569046 PAPLNO95428 1278 aa5.38□□□□□ -1.55
HMGB1P6-201ENST00000569046 ITGB5P18084 799 aa5.38□□□□□ -1.55
HMGB1P6-201ENST00000569046 EIF6P56537 245 aaKnown RBP5.38□□□□□ -1.55
HMGB1P6-201ENST00000569046 CHMP4BP1P59074 171 aa5.38□□□□□ -1.55
HMGB1P6-201ENST00000569046 NMIQ13287 307 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P6-201ENST00000569046 RALGPS1Q5JS13 557 aa5.38□□□□□ -1.55
HMGB1P6-201ENST00000569046 FAM169BQ8N8A8 192 aa5.38□□□□□ -1.55
HMGB1P6-201ENST00000569046 HDAC8Q9BY41 377 aa5.38□□□□□ -1.55
HMGB1P6-201ENST00000569046 CAPN10Q9HC96 672 aa5.38□□□□□ -1.55
HMGB1P6-201ENST00000569046 SUCOQ9UBS9 1254 aaKnown RBP5.38□□□□□ -1.55
HMGB1P6-201ENST00000569046 PCDHA11Q9Y5I1 949 aa5.38□□□□□ -1.55
HMGB1P6-201ENST00000569046 PRDM2Q13029 1718 aa5.37□□□□□ -1.55
HMGB1P6-201ENST00000569046 PMS1P54277 932 aaKnown RBP5.37□□□□□ -1.55
HMGB1P6-201ENST00000569046 EGR3Q06889 387 aa5.37□□□□□ -1.55
HMGB1P6-201ENST00000569046 TTC6Q86TZ1 520 aa5.37□□□□□ -1.55
HMGB1P6-201ENST00000569046 CRBNQ96SW2 442 aa5.37□□□□□ -1.55
HMGB1P6-201ENST00000569046 TINF2Q9BSI4 451 aa5.37□□□□□ -1.55
HMGB1P6-201ENST00000569046 MKRN2Q9H000 416 aaKnown RBP5.37□□□□□ -1.55
HMGB1P6-201ENST00000569046 FAM86C1Q9NVL1 165 aa5.37□□□□□ -1.55
HMGB1P6-201ENST00000569046 SLAMF8Q9P0V8 285 aa5.37□□□□□ -1.55
HMGB1P6-201ENST00000569046 CTNND2Q9UQB3 1225 aa5.37□□□□□ -1.55
HMGB1P6-201ENST00000569046 A0A1W2PQH9 124 aa5.36□□□□□ -1.55
HMGB1P6-201ENST00000569046 PRAMEF1O95521 474 aa5.36□□□□□ -1.55
HMGB1P6-201ENST00000569046 AUHQ13825 339 aaKnown RBP5.36□□□□□ -1.55
HMGB1P6-201ENST00000569046 CLEC16AQ2KHT3 1053 aa5.36□□□□□ -1.55
HMGB1P6-201ENST00000569046 AXDND1Q5T1B0 1012 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P6-201ENST00000569046 DCAF15Q66K64 600 aa5.36□□□□□ -1.55
HMGB1P6-201ENST00000569046 ATG4DQ86TL0 474 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P6-201ENST00000569046 USHBP1Q8N6Y0 703 aa5.36□□□□□ -1.55
HMGB1P6-201ENST00000569046 SYTL5Q8TDW5 730 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P6-201ENST00000569046 TCTN2Q96GX1 697 aa5.36□□□□□ -1.55
HMGB1P6-201ENST00000569046 DHRS1Q96LJ7 313 aa5.36□□□□□ -1.55
HMGB1P6-201ENST00000569046 ALPK1Q96QP1 1244 aa5.36□□□□□ -1.55
HMGB1P6-201ENST00000569046 ADAMTS10Q9H324 1103 aa5.36□□□□□ -1.55
HMGB1P6-201ENST00000569046 EBF1Q9UH73 591 aa5.36□□□□□ -1.55
HMGB1P6-201ENST00000569046 CARMIL2Q6F5E8 1435 aa5.35□□□□□ -1.55
HMGB1P6-201ENST00000569046 SIGLEC6O43699 453 aa5.35□□□□□ -1.55
HMGB1P6-201ENST00000569046 TP53P04637 393 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P6-201ENST00000569046 LTKP29376 864 aa5.35□□□□□ -1.55
HMGB1P6-201ENST00000569046 TEKQ02763 1124 aa5.35□□□□□ -1.55
HMGB1P6-201ENST00000569046 FYB2Q5VWT5 728 aa5.35□□□□□ -1.55
HMGB1P6-201ENST00000569046 CCDC144CPQ8IYA2 1237 aa5.35□□□□□ -1.55
HMGB1P6-201ENST00000569046 C7orf61Q8IZ16 206 aa5.35□□□□□ -1.55
HMGB1P6-201ENST00000569046 DAGLBQ8NCG7 672 aa5.35□□□□□ -1.55
HMGB1P6-201ENST00000569046 FLAD1Q8NFF5 587 aa5.35□□□□□ -1.55
HMGB1P6-201ENST00000569046 ENOX1Q8TC92 643 aaKnown RBP5.35□□□□□ -1.55
HMGB1P6-201ENST00000569046 CPLX3Q8WVH0 158 aa5.35□□□□□ -1.55
HMGB1P6-201ENST00000569046 GFOD1Q9NXC2 390 aa5.35□□□□□ -1.55
HMGB1P6-201ENST00000569046 FBXL21Q9UKT6 434 aa5.35□□□□□ -1.55
HMGB1P6-201ENST00000569046 ZNF214Q9UL59 606 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P6-201ENST00000569046 PCDHB10Q9UN67 800 aa5.35□□□□□ -1.55
HMGB1P6-201ENST00000569046 MRVI1Q9Y6F6 885 aa5.35□□□□□ -1.55
HMGB1P6-201ENST00000569046 EIF4G3O43432 1585 aaKnown RBP5.34□□□□□ -1.55
HMGB1P6-201ENST00000569046 MEIS1O00470 390 aa5.34□□□□□ -1.55
HMGB1P6-201ENST00000569046 ZGLP1P0C6A0 271 aa5.34□□□□□ -1.55
HMGB1P6-201ENST00000569046 CTSKP43235 329 aa5.34□□□□□ -1.55
HMGB1P6-201ENST00000569046 HK2P52789 917 aa5.34□□□□□ -1.55
HMGB1P6-201ENST00000569046 ERVFC1P60507 584 aa5.34□□□□□ -1.55
HMGB1P6-201ENST00000569046 C19orf47Q8N9M1 422 aaKnown RBP5.34□□□□□ -1.55
HMGB1P6-201ENST00000569046 OR6P1Q8NGX9 317 aa5.34□□□□□ -1.55
HMGB1P6-201ENST00000569046 ANAPC16Q96DE5 110 aa5.34□□□□□ -1.55
HMGB1P6-201ENST00000569046 FOXP3Q9BZS1 431 aa5.34□□□□□ -1.55
HMGB1P6-201ENST00000569046 ASCC2Q9H1I8 757 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P6-201ENST00000569046 TMEM59LQ9UK28 342 aa5.34□□□□□ -1.55
HMGB1P6-201ENST00000569046 ZNF281Q9Y2X9 895 aa5.34□□□□□ -1.55
HMGB1P6-201ENST00000569046 PCDHB12Q9Y5F1 795 aa5.34□□□□□ -1.55
HMGB1P6-201ENST00000569046 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P6-201ENST00000569046 CFTRP13569 1480 aa5.33□□□□□ -1.56
HMGB1P6-201ENST00000569046 ARAP1Q96P48 1450 aa5.33□□□□□ -1.56
HMGB1P6-201ENST00000569046 CBFA2T2O43439 604 aa5.33□□□□□ -1.56
HMGB1P6-201ENST00000569046 FGRP09769 529 aa5.33□□□□□ -1.56
HMGB1P6-201ENST00000569046 JUNBP17275 347 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P6-201ENST00000569046 GDNFP39905 211 aa5.33□□□□□ -1.56
HMGB1P6-201ENST00000569046 CASP7P55210 303 aa5.33□□□□□ -1.56
HMGB1P6-201ENST00000569046 PPP2R5EQ16537 467 aa5.33□□□□□ -1.56
HMGB1P6-201ENST00000569046 BBS9Q3SYG4 887 aa5.33□□□□□ -1.56
HMGB1P6-201ENST00000569046 ANKRD39Q53RE8 183 aa5.33□□□□□ -1.56
HMGB1P6-201ENST00000569046 ZPBP2Q6X784 338 aa5.33□□□□□ -1.56
HMGB1P6-201ENST00000569046 ZNF655Q8N720 491 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P6-201ENST00000569046 KLHL6Q8WZ60 621 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms