RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 LEXMQ3ZCV2 418 aa13.94□□□□□ -0.18
CDH3-208ENST00000569036 SPTY2D1Q68D10 685 aaPredicted RBP13.94□□□□□ -0.18
CDH3-208ENST00000569036 METTL16Q86W50 562 aaKnown RBP13.94□□□□□ -0.18
CDH3-208ENST00000569036 TEX11Q8IYF3 940 aa13.94□□□□□ -0.18
CDH3-208ENST00000569036 ABRAQ8N0Z2 381 aa13.94□□□□□ -0.18
CDH3-208ENST00000569036 MFSD14AQ96MC6 490 aa13.94□□□□□ -0.18
CDH3-208ENST00000569036 GLT1D1Q96MS3 346 aa13.94□□□□□ -0.18
CDH3-208ENST00000569036 SRCIN1Q9C0H9 1055 aa13.94□□□□□ -0.18
CDH3-208ENST00000569036 SPATC1LQ9H0A9 340 aa13.94□□□□□ -0.18
CDH3-208ENST00000569036 FOCADQ5VW36 1801 aa13.94□□□□□ -0.18
CDH3-208ENST00000569036 CACNA1HO95180 2353 aa13.94□□□□□ -0.18
CDH3-208ENST00000569036 PDS5AQ29RF7 1337 aaKnown RBP13.93□□□□□ -0.18
CDH3-208ENST00000569036 A0A0U1RQG5 324 aaPredicted RBP13.93□□□□□ -0.18
CDH3-208ENST00000569036 ARVCFO00192 962 aa13.93□□□□□ -0.18
CDH3-208ENST00000569036 LPXNO60711 386 aa13.93□□□□□ -0.18
CDH3-208ENST00000569036 TAP1Q03518 808 aa13.93□□□□□ -0.18
CDH3-208ENST00000569036 SLC4A10Q6U841 1118 aa13.93□□□□□ -0.18
CDH3-208ENST00000569036 ATG9AQ7Z3C6 839 aa13.93□□□□□ -0.18
CDH3-208ENST00000569036 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.93□□□□□ -0.18
CDH3-208ENST00000569036 DHX36Q9H2U1 1008 aaKnown RBP13.93□□□□□ -0.18
CDH3-208ENST00000569036 RPAP3Q9H6T3 665 aaPredicted RBP13.93□□□□□ -0.18
CDH3-208ENST00000569036 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.92□□□□□ -0.18
CDH3-208ENST00000569036 GH2P01242 217 aa13.92□□□□□ -0.18
CDH3-208ENST00000569036 CD4P01730 458 aa13.92□□□□□ -0.18
CDH3-208ENST00000569036 USP14P54578 494 aa13.92□□□□□ -0.18
CDH3-208ENST00000569036 ERMP1Q7Z2K6 904 aa13.92□□□□□ -0.18
CDH3-208ENST00000569036 CRACR2BQ8N4Y2 399 aaPredicted RBP13.92□□□□□ -0.18
CDH3-208ENST00000569036 VWCEQ96DN2 955 aa13.92□□□□□ -0.18
CDH3-208ENST00000569036 TINF2Q9BSI4 451 aa13.92□□□□□ -0.18
CDH3-208ENST00000569036 TRIM34Q9BYJ4 488 aa13.92□□□□□ -0.18
CDH3-208ENST00000569036 KIAA1683Q9H0B3 1180 aa13.92□□□□□ -0.18
CDH3-208ENST00000569036 HIPK3Q9H422 1215 aa13.92□□□□□ -0.18
CDH3-208ENST00000569036 EPG5Q9HCE0 2579 aa13.92□□□□□ -0.18
CDH3-208ENST00000569036 TECTAO75443 2155 aa13.92□□□□□ -0.18
CDH3-208ENST00000569036 KCNA5P22460 613 aa13.91□□□□□ -0.18
CDH3-208ENST00000569036 CST5P28325 142 aaPredicted RBP13.91□□□□□ -0.18
CDH3-208ENST00000569036 ADORA1P30542 326 aa13.91□□□□□ -0.18
CDH3-208ENST00000569036 RFX5P48382 616 aaPredicted RBP13.91□□□□□ -0.18
CDH3-208ENST00000569036 CCL23P55773 120 aa13.91□□□□□ -0.18
CDH3-208ENST00000569036 IRX5P78411 483 aaPredicted RBP13.91□□□□□ -0.18
CDH3-208ENST00000569036 CCDC102BQ68D86 513 aa13.91□□□□□ -0.18
CDH3-208ENST00000569036 PTCRAQ6ISU1 281 aaPredicted RBP13.91□□□□□ -0.18
CDH3-208ENST00000569036 ERICH6Q7L0X2 663 aa13.91□□□□□ -0.18
CDH3-208ENST00000569036 SH3RF3Q8TEJ3 882 aaPredicted RBP13.91□□□□□ -0.18
CDH3-208ENST00000569036 CDCA7LQ96GN5 454 aa13.91□□□□□ -0.18
CDH3-208ENST00000569036 WNT8AQ9H1J5 351 aa13.91□□□□□ -0.18
CDH3-208ENST00000569036 MROH8Q9H579 483 aa13.91□□□□□ -0.18
CDH3-208ENST00000569036 ASGR1P07306 291 aa13.9□□□□□ -0.18
CDH3-208ENST00000569036 TCF15Q12870 199 aa13.9□□□□□ -0.18
CDH3-208ENST00000569036 IER5LQ5T953 404 aa13.9□□□□□ -0.18
CDH3-208ENST00000569036 SPRED2Q7Z698 418 aa13.9□□□□□ -0.18
CDH3-208ENST00000569036 NCAPG2Q86XI2 1143 aa13.9□□□□□ -0.18
CDH3-208ENST00000569036 FOXP4Q8IVH2 680 aaPredicted RBP13.9□□□□□ -0.18
CDH3-208ENST00000569036 ACER1Q8TDN7 264 aa13.9□□□□□ -0.18
CDH3-208ENST00000569036 VTI1AQ96AJ9 217 aa13.9□□□□□ -0.18
CDH3-208ENST00000569036 NSUN4Q96CB9 384 aaKnown RBP13.9□□□□□ -0.18
CDH3-208ENST00000569036 KMT2BQ9UMN6 2715 aaPredicted RBP13.9□□□□□ -0.18
CDH3-208ENST00000569036 ZNF536O15090 1300 aa13.9□□□□□ -0.19
CDH3-208ENST00000569036 GRXCR2A6NFK2 248 aa13.89□□□□□ -0.19
CDH3-208ENST00000569036 VAMP4O75379 141 aa13.89□□□□□ -0.19
CDH3-208ENST00000569036 LDHCP07864 332 aa13.89□□□□□ -0.19
CDH3-208ENST00000569036 FCER1AP12319 257 aa13.89□□□□□ -0.19
CDH3-208ENST00000569036 TTLL4Q14679 1199 aa13.89□□□□□ -0.19
CDH3-208ENST00000569036 GDPD5Q8WTR4 605 aa13.89□□□□□ -0.19
CDH3-208ENST00000569036 NOC4LQ9BVI4 516 aaKnown RBP13.89□□□□□ -0.19
CDH3-208ENST00000569036 RIF1Q5UIP0 2472 aaKnown RBP13.89□□□□□ -0.19
CDH3-208ENST00000569036 PLXNA3P51805 1871 aa13.89□□□□□ -0.19
CDH3-208ENST00000569036 KMT2EQ8IZD2 1858 aa13.89□□□□□ -0.19
CDH3-208ENST00000569036 KRT37O76014 449 aa13.88□□□□□ -0.19
CDH3-208ENST00000569036 PGK2P07205 417 aa13.88□□□□□ -0.19
CDH3-208ENST00000569036 GSTO1P78417 241 aa13.88□□□□□ -0.19
CDH3-208ENST00000569036 MAPKAPK5Q8IW41 473 aa13.88□□□□□ -0.19
CDH3-208ENST00000569036 RPUSD2Q8IZ73 545 aaKnown RBP13.88□□□□□ -0.19
CDH3-208ENST00000569036 PCSK9Q8NBP7 692 aaKnown RBP13.88□□□□□ -0.19
CDH3-208ENST00000569036 FAM86C1Q9NVL1 165 aa13.88□□□□□ -0.19
CDH3-208ENST00000569036 LMCD1Q9NZU5 365 aa13.88□□□□□ -0.19
CDH3-208ENST00000569036 CEP126Q9P2H0 1117 aa13.88□□□□□ -0.19
CDH3-208ENST00000569036 PALD1Q9ULE6 856 aa13.88□□□□□ -0.19
CDH3-208ENST00000569036 CNPY2Q9Y2B0 182 aa13.88□□□□□ -0.19
CDH3-208ENST00000569036 VPS13AQ96RL7 3174 aa13.88□□□□□ -0.19
CDH3-208ENST00000569036 FAM186AA6NE01 2351 aa13.88□□□□□ -0.19
CDH3-208ENST00000569036 SCN5AQ14524 2016 aa13.88□□□□□ -0.19
CDH3-208ENST00000569036 FLT1P17948 1338 aa13.88□□□□□ -0.19
CDH3-208ENST00000569036 DMDP11532 3685 aa13.87□□□□□ -0.19
CDH3-208ENST00000569036 DUSP11O75319 330 aaKnown RBP13.87□□□□□ -0.19
CDH3-208ENST00000569036 C6orf222P0C671 652 aaPredicted RBP13.87□□□□□ -0.19
CDH3-208ENST00000569036 ZP2Q05996 745 aa13.87□□□□□ -0.19
CDH3-208ENST00000569036 PLS1Q14651 629 aa13.87□□□□□ -0.19
CDH3-208ENST00000569036 COG2Q14746 738 aa13.87□□□□□ -0.19
CDH3-208ENST00000569036 RAB3GAP1Q15042 981 aa13.87□□□□□ -0.19
CDH3-208ENST00000569036 ZNF792Q3KQV3 632 aa13.87□□□□□ -0.19
CDH3-208ENST00000569036 SCLYQ96I15 445 aa13.87□□□□□ -0.19
CDH3-208ENST00000569036 HOXC10Q9NYD6 342 aa13.87□□□□□ -0.19
CDH3-208ENST00000569036 FAM184BQ9ULE4 1060 aa13.87□□□□□ -0.19
CDH3-208ENST00000569036 ZFHX4Q86UP3 3567 aa13.87□□□□□ -0.19
CDH3-208ENST00000569036 COL11A1P12107 1806 aaPredicted RBP13.87□□□□□ -0.19
CDH3-208ENST00000569036 PARP14Q460N5 1801 aa13.87□□□□□ -0.19
CDH3-208ENST00000569036 MB21D1Q8N884 522 aa13.86□□□□□ -0.19
CDH3-208ENST00000569036 SLC9A7Q96T83 725 aa13.86□□□□□ -0.19
CDH3-208ENST00000569036 MMP19Q99542 508 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms