RNA–Protein interactions for RNA: ENST00000569035.5

NEIL1-221, Transcript of nei like DNA glycosylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEIL1, Length 1,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-221ENST00000569035 PRMT6Q96LA8 375 aaPredicted RBP20.23■□□□□ 0.83
NEIL1-221ENST00000569035 RNF181Q9P0P0 153 aa20.23■□□□□ 0.83
NEIL1-221ENST00000569035 HDAC9Q9UKV0 1011 aa20.23■□□□□ 0.83
NEIL1-221ENST00000569035 KCNH3Q9ULD8 1083 aa20.23■□□□□ 0.83
NEIL1-221ENST00000569035 V9GY48 417 aaPredicted RBP20.23■□□□□ 0.83
NEIL1-221ENST00000569035 DDX60LQ5H9U9 1706 aaKnown RBP20.23■□□□□ 0.83
NEIL1-221ENST00000569035 SHTN1A0MZ66 631 aa20.23■□□□□ 0.83
NEIL1-221ENST00000569035 PFKFB3Q16875 520 aaPredicted RBP20.23■□□□□ 0.83
NEIL1-221ENST00000569035 CT47A1Q5JQC4 288 aaPredicted RBP20.23■□□□□ 0.83
NEIL1-221ENST00000569035 SHC4Q6S5L8 630 aa20.23■□□□□ 0.83
NEIL1-221ENST00000569035 DACH1Q9UI36 760 aa20.23■□□□□ 0.83
NEIL1-221ENST00000569035 KCNJ14Q9UNX9 436 aa20.23■□□□□ 0.83
NEIL1-221ENST00000569035 GMPSP49915 693 aaPredicted RBP20.22■□□□□ 0.83
NEIL1-221ENST00000569035 EVX2Q03828 476 aa20.22■□□□□ 0.83
NEIL1-221ENST00000569035 SLC4A8Q2Y0W8 1093 aa20.22■□□□□ 0.83
NEIL1-221ENST00000569035 C9orf131Q5VYM1 1079 aa20.22■□□□□ 0.83
NEIL1-221ENST00000569035 C16orf86Q6ZW13 317 aa20.22■□□□□ 0.83
NEIL1-221ENST00000569035 TRIML1Q8N9V2 468 aa20.22■□□□□ 0.83
NEIL1-221ENST00000569035 CCDC148Q8NFR7 591 aa20.22■□□□□ 0.83
NEIL1-221ENST00000569035 CYP2D6P10635 497 aa20.21■□□□□ 0.83
NEIL1-221ENST00000569035 PICALMQ13492 652 aa20.21■□□□□ 0.83
NEIL1-221ENST00000569035 GRM4Q14833 912 aa20.21■□□□□ 0.83
NEIL1-221ENST00000569035 KRBA2Q6ZNG9 492 aa20.21■□□□□ 0.83
NEIL1-221ENST00000569035 DRC7Q8IY82 874 aa20.21■□□□□ 0.83
NEIL1-221ENST00000569035 CCDC82Q8N4S0 544 aa20.21■□□□□ 0.83
NEIL1-221ENST00000569035 PNMA1Q8ND90 353 aa20.21■□□□□ 0.83
NEIL1-221ENST00000569035 CNNM3Q8NE01 707 aa20.21■□□□□ 0.83
NEIL1-221ENST00000569035 SAP30BPQ9UHR5 308 aaKnown RBP20.21■□□□□ 0.83
NEIL1-221ENST00000569035 FBXO2Q9UK22 296 aaPredicted RBP20.21■□□□□ 0.83
NEIL1-221ENST00000569035 MYH1P12882 1939 aa20.21■□□□□ 0.83
NEIL1-221ENST00000569035 ZNF646O15015 1829 aaPredicted RBP20.21■□□□□ 0.83
NEIL1-221ENST00000569035 TOB1P50616 345 aaPredicted RBP20.21■□□□□ 0.83
NEIL1-221ENST00000569035 CACNB3P54284 484 aa20.21■□□□□ 0.83
NEIL1-221ENST00000569035 RCSD1Q6JBY9 416 aa20.21■□□□□ 0.83
NEIL1-221ENST00000569035 C11orf57Q6ZUT1 292 aaPredicted RBP20.21■□□□□ 0.83
NEIL1-221ENST00000569035 CCDC12Q8WUD4 166 aaPredicted RBP20.21■□□□□ 0.83
NEIL1-221ENST00000569035 TDRD3Q9H7E2 651 aaKnown RBP20.21■□□□□ 0.83
NEIL1-221ENST00000569035 RPS12P25398 132 aaKnown RBP20.2■□□□□ 0.82
NEIL1-221ENST00000569035 NFIAQ12857 509 aa20.2■□□□□ 0.82
NEIL1-221ENST00000569035 DLGAP5Q15398 846 aa20.2■□□□□ 0.82
NEIL1-221ENST00000569035 FAM47AQ5JRC9 791 aa20.2■□□□□ 0.82
NEIL1-221ENST00000569035 CABP5Q9NP86 173 aa20.2■□□□□ 0.82
NEIL1-221ENST00000569035 DDX4Q9NQI0 724 aaKnown RBP20.2■□□□□ 0.82
NEIL1-221ENST00000569035 FLT1P17948 1338 aa20.2■□□□□ 0.82
NEIL1-221ENST00000569035 SPDYE2BA6NHP3 402 aa20.19■□□□□ 0.82
NEIL1-221ENST00000569035 GRIN3BO60391 1043 aa20.19■□□□□ 0.82
NEIL1-221ENST00000569035 PLEKHA8P1O95397 391 aa20.19■□□□□ 0.82
NEIL1-221ENST00000569035 SPDYE6P0CI01 402 aa20.19■□□□□ 0.82
NEIL1-221ENST00000569035 DHX40Q8IX18 779 aaKnown RBP20.19■□□□□ 0.82
NEIL1-221ENST00000569035 SRBD1Q8N5C6 995 aaKnown RBP20.19■□□□□ 0.82
NEIL1-221ENST00000569035 NEDD1Q8NHV4 660 aa20.19■□□□□ 0.82
NEIL1-221ENST00000569035 IMPACTQ9P2X3 320 aa20.19■□□□□ 0.82
NEIL1-221ENST00000569035 AP5Z1O43299 807 aa20.18■□□□□ 0.82
NEIL1-221ENST00000569035 TPM2P07951 284 aa20.18■□□□□ 0.82
NEIL1-221ENST00000569035 NLRP5P59047 1200 aa20.18■□□□□ 0.82
NEIL1-221ENST00000569035 DPF2Q92785 391 aa20.18■□□□□ 0.82
NEIL1-221ENST00000569035 VPS54Q9P1Q0 977 aa20.18■□□□□ 0.82
NEIL1-221ENST00000569035 CLIP2Q9UDT6 1046 aa20.18■□□□□ 0.82
NEIL1-221ENST00000569035 CNOT7Q9UIV1 285 aaKnown RBP20.18■□□□□ 0.82
NEIL1-221ENST00000569035 hCG_1984214I3L0E3 225 aa20.18■□□□□ 0.82
NEIL1-221ENST00000569035 GSDMDP57764 484 aa20.18■□□□□ 0.82
NEIL1-221ENST00000569035 NR5A1Q13285 461 aa20.18■□□□□ 0.82
NEIL1-221ENST00000569035 RBM26Q5T8P6 1007 aaKnown RBP20.18■□□□□ 0.82
NEIL1-221ENST00000569035 MICALL2Q8IY33 904 aa20.18■□□□□ 0.82
NEIL1-221ENST00000569035 ZNF713Q8N859 430 aaPredicted RBP20.18■□□□□ 0.82
NEIL1-221ENST00000569035 MYOZ2Q9NPC6 264 aa20.18■□□□□ 0.82
NEIL1-221ENST00000569035 PLIN4Q96Q06 1357 aa20.18■□□□□ 0.82
NEIL1-221ENST00000569035 PLCD1P51178 756 aa20.17■□□□□ 0.82
NEIL1-221ENST00000569035 ZNF280AP59817 542 aaPredicted RBP20.17■□□□□ 0.82
NEIL1-221ENST00000569035 ARL6IP4Q66PJ3 421 aaKnown RBP20.17■□□□□ 0.82
NEIL1-221ENST00000569035 GPC2Q8N158 579 aa20.17■□□□□ 0.82
NEIL1-221ENST00000569035 CMTR1Q8N1G2 835 aaKnown RBP20.17■□□□□ 0.82
NEIL1-221ENST00000569035 DAGLBQ8NCG7 672 aa20.17■□□□□ 0.82
NEIL1-221ENST00000569035 TNFRSF25Q93038 417 aa20.17■□□□□ 0.82
NEIL1-221ENST00000569035 SPTLC3Q9NUV7 552 aa20.17■□□□□ 0.82
NEIL1-221ENST00000569035 SWAP70Q9UH65 585 aa20.17■□□□□ 0.82
NEIL1-221ENST00000569035 ADAMTSL1Q8N6G6 1762 aa20.16■□□□□ 0.82
NEIL1-221ENST00000569035 CLRN2A0PK11 232 aa20.16■□□□□ 0.82
NEIL1-221ENST00000569035 SMC2O95347 1197 aa20.16■□□□□ 0.82
NEIL1-221ENST00000569035 EGFRP00533 1210 aa20.16■□□□□ 0.82
NEIL1-221ENST00000569035 RASA1P20936 1047 aa20.16■□□□□ 0.82
NEIL1-221ENST00000569035 NT5DC1Q5TFE4 455 aa20.16■□□□□ 0.82
NEIL1-221ENST00000569035 ZFPM1Q8IX07 1006 aa20.16■□□□□ 0.82
NEIL1-221ENST00000569035 MTMR14Q8NCE2 650 aa20.16■□□□□ 0.82
NEIL1-221ENST00000569035 NAP1L5Q96NT1 182 aaPredicted RBP20.16■□□□□ 0.82
NEIL1-221ENST00000569035 SPZ1Q9BXG8 430 aa20.16■□□□□ 0.82
NEIL1-221ENST00000569035 PCDHB6Q9Y5E3 794 aa20.16■□□□□ 0.82
NEIL1-221ENST00000569035 CBFA2T2O43439 604 aa20.16■□□□□ 0.82
NEIL1-221ENST00000569035 NRDCO43847 1150 aa20.16■□□□□ 0.82
NEIL1-221ENST00000569035 DDNO94850 711 aaPredicted RBP20.16■□□□□ 0.82
NEIL1-221ENST00000569035 TOP1P11387 765 aaKnown RBP20.16■□□□□ 0.82
NEIL1-221ENST00000569035 YY1P25490 414 aa20.16■□□□□ 0.82
NEIL1-221ENST00000569035 NOVP48745 357 aa20.16■□□□□ 0.82
NEIL1-221ENST00000569035 CDK8P49336 464 aa20.16■□□□□ 0.82
NEIL1-221ENST00000569035 TCP10Q12799 353 aa20.16■□□□□ 0.82
NEIL1-221ENST00000569035 NOLC1Q14978 699 aaKnown RBP eCLIP20.16■□□□□ 0.82
NEIL1-221ENST00000569035 NBPF9Q3BBW0 867 aa20.16■□□□□ 0.82
NEIL1-221ENST00000569035 TTC38Q5R3I4 469 aa20.16■□□□□ 0.82
NEIL1-221ENST00000569035 SAMD7Q7Z3H4 446 aa20.16■□□□□ 0.82
NEIL1-221ENST00000569035 AOPEPQ8N6M6 819 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms