RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-207ENST00000568782 CWC27Q6UX04 472 aaKnown RBP12.28□□□□□ -0.44
UBR1-207ENST00000568782 SIAH1Q8IUQ4 282 aa12.28□□□□□ -0.44
UBR1-207ENST00000568782 PRPF38AQ8NAV1 312 aaKnown RBP12.28□□□□□ -0.44
UBR1-207ENST00000568782 SHCBP1Q8NEM2 672 aa12.28□□□□□ -0.44
UBR1-207ENST00000568782 U2AF1L4Q8WU68 220 aaKnown RBP12.28□□□□□ -0.44
UBR1-207ENST00000568782 CEP95Q96GE4 821 aa12.28□□□□□ -0.44
UBR1-207ENST00000568782 FAM227BQ96M60 508 aa12.28□□□□□ -0.44
UBR1-207ENST00000568782 DEFB118Q96PH6 123 aa12.28□□□□□ -0.44
UBR1-207ENST00000568782 RNF41Q9H4P4 317 aaPredicted RBP12.28□□□□□ -0.44
UBR1-207ENST00000568782 MTMR4Q9NYA4 1195 aa12.28□□□□□ -0.44
UBR1-207ENST00000568782 BTBD7Q9P203 1132 aa12.28□□□□□ -0.44
UBR1-207ENST00000568782 STX8Q9UNK0 236 aa12.28□□□□□ -0.44
UBR1-207ENST00000568782 CCDC171Q6TFL3 1326 aa12.28□□□□□ -0.44
UBR1-207ENST00000568782 GREB1LQ9C091 1923 aaPredicted RBP12.27□□□□□ -0.44
UBR1-207ENST00000568782 A0A0D9SFI3 127 aa12.27□□□□□ -0.45
UBR1-207ENST00000568782 ZNF213O14771 459 aa12.27□□□□□ -0.45
UBR1-207ENST00000568782 ZBED4O75132 1171 aa12.27□□□□□ -0.45
UBR1-207ENST00000568782 FGAP02671 866 aa12.27□□□□□ -0.45
UBR1-207ENST00000568782 HSPD1P10809 573 aaKnown RBP12.27□□□□□ -0.45
UBR1-207ENST00000568782 PCP11498 1178 aaKnown RBP12.27□□□□□ -0.45
UBR1-207ENST00000568782 FCER1AP12319 257 aa12.27□□□□□ -0.45
UBR1-207ENST00000568782 FAM47AQ5JRC9 791 aa12.27□□□□□ -0.45
UBR1-207ENST00000568782 RRP12Q5JTH9 1297 aaKnown RBP12.27□□□□□ -0.45
UBR1-207ENST00000568782 MORN1Q5T089 497 aa12.27□□□□□ -0.45
UBR1-207ENST00000568782 PRPF38BQ5VTL8 546 aaKnown RBP12.27□□□□□ -0.45
UBR1-207ENST00000568782 MFSD6Q6ZSS7 791 aa12.27□□□□□ -0.45
UBR1-207ENST00000568782 RUFY2Q8WXA3 655 aa12.27□□□□□ -0.45
UBR1-207ENST00000568782 DPF3Q92784 378 aa12.27□□□□□ -0.45
UBR1-207ENST00000568782 MKL1Q969V6 931 aa12.27□□□□□ -0.45
UBR1-207ENST00000568782 ATG4CQ96DT6 458 aa12.27□□□□□ -0.45
UBR1-207ENST00000568782 SLF1Q9BQI6 1058 aa12.27□□□□□ -0.45
UBR1-207ENST00000568782 MOV10L1Q9BXT6 1211 aaKnown RBP12.27□□□□□ -0.45
UBR1-207ENST00000568782 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.27□□□□□ -0.45
UBR1-207ENST00000568782 ANAPC4Q9UJX5 808 aa12.27□□□□□ -0.45
UBR1-207ENST00000568782 PARP14Q460N5 1801 aa12.27□□□□□ -0.45
UBR1-207ENST00000568782 CNMDO75829 334 aa12.26□□□□□ -0.45
UBR1-207ENST00000568782 FDX1P10109 184 aa12.26□□□□□ -0.45
UBR1-207ENST00000568782 PRKAR2AP13861 404 aaKnown RBP12.26□□□□□ -0.45
UBR1-207ENST00000568782 ERCC3P19447 782 aa12.26□□□□□ -0.45
UBR1-207ENST00000568782 STAT3P40763 770 aa12.26□□□□□ -0.45
UBR1-207ENST00000568782 KCTD2Q14681 263 aa12.26□□□□□ -0.45
UBR1-207ENST00000568782 VPS53Q5VIR6 699 aa12.26□□□□□ -0.45
UBR1-207ENST00000568782 SLFN13Q68D06 897 aa12.26□□□□□ -0.45
UBR1-207ENST00000568782 CHURC1Q8WUH1 139 aa12.26□□□□□ -0.45
UBR1-207ENST00000568782 TRIB2Q92519 343 aa12.26□□□□□ -0.45
UBR1-207ENST00000568782 CTNNA3Q9UI47 895 aa12.26□□□□□ -0.45
UBR1-207ENST00000568782 FEM1BQ9UK73 627 aa12.26□□□□□ -0.45
UBR1-207ENST00000568782 PPP1R9AQ9ULJ8 1098 aa12.26□□□□□ -0.45
UBR1-207ENST00000568782 RLFQ13129 1914 aa12.26□□□□□ -0.45
UBR1-207ENST00000568782 TNRC18O15417 2968 aaPredicted RBP12.25□□□□□ -0.45
UBR1-207ENST00000568782 VWA5AO00534 786 aa12.25□□□□□ -0.45
UBR1-207ENST00000568782 FARP2O94887 1054 aaPredicted RBP12.25□□□□□ -0.45
UBR1-207ENST00000568782 NDUFB10O96000 172 aa12.25□□□□□ -0.45
UBR1-207ENST00000568782 BMP3P12645 472 aa12.25□□□□□ -0.45
UBR1-207ENST00000568782 CNGA1P29973 690 aa12.25□□□□□ -0.45
UBR1-207ENST00000568782 SLC1A4P43007 532 aa12.25□□□□□ -0.45
UBR1-207ENST00000568782 SLC4A3P48751 1232 aa12.25□□□□□ -0.45
UBR1-207ENST00000568782 NT5C2P49902 561 aa12.25□□□□□ -0.45
UBR1-207ENST00000568782 GRB14Q14449 540 aa12.25□□□□□ -0.45
UBR1-207ENST00000568782 KIAA1755Q5JYT7 1200 aa12.25□□□□□ -0.45
UBR1-207ENST00000568782 ABRAQ8N0Z2 381 aa12.25□□□□□ -0.45
UBR1-207ENST00000568782 LRRC47Q8N1G4 583 aaKnown RBP12.25□□□□□ -0.45
UBR1-207ENST00000568782 ANKLE1Q8NAG6 615 aa12.25□□□□□ -0.45
UBR1-207ENST00000568782 GMCL1P1Q8NEA9 526 aa12.25□□□□□ -0.45
UBR1-207ENST00000568782 KIFC2Q96AC6 838 aa12.25□□□□□ -0.45
UBR1-207ENST00000568782 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.25□□□□□ -0.45
UBR1-207ENST00000568782 PAK6Q9NQU5 681 aaPredicted RBP12.25□□□□□ -0.45
UBR1-207ENST00000568782 ZMYM6O95789 1325 aa12.25□□□□□ -0.45
UBR1-207ENST00000568782 IGKV6D-41A0A0C4DH26 115 aa12.24□□□□□ -0.45
UBR1-207ENST00000568782 ORC4O43929 436 aa12.24□□□□□ -0.45
UBR1-207ENST00000568782 MSCO60682 206 aa12.24□□□□□ -0.45
UBR1-207ENST00000568782 ADORA2AP29274 412 aa12.24□□□□□ -0.45
UBR1-207ENST00000568782 STAT2P52630 851 aa12.24□□□□□ -0.45
UBR1-207ENST00000568782 TMEM132BQ14DG7 1078 aa12.24□□□□□ -0.45
UBR1-207ENST00000568782 IMMTQ16891 758 aaKnown RBP12.24□□□□□ -0.45
UBR1-207ENST00000568782 CCDC178Q5BJE1 867 aa12.24□□□□□ -0.45
UBR1-207ENST00000568782 AKNAD1Q5T1N1 836 aa12.24□□□□□ -0.45
UBR1-207ENST00000568782 NECAB2Q7Z6G3 386 aa12.24□□□□□ -0.45
UBR1-207ENST00000568782 FAM160B2Q86V87 743 aa12.24□□□□□ -0.45
UBR1-207ENST00000568782 RIOX2Q8IUF8 465 aa12.24□□□□□ -0.45
UBR1-207ENST00000568782 ESR2Q92731 530 aa12.24□□□□□ -0.45
UBR1-207ENST00000568782 USP6NLQ92738 828 aa12.24□□□□□ -0.45
UBR1-207ENST00000568782 DDX11Q96FC9 970 aa12.24□□□□□ -0.45
UBR1-207ENST00000568782 PLIN4Q96Q06 1357 aa12.24□□□□□ -0.45
UBR1-207ENST00000568782 MMP19Q99542 508 aa12.24□□□□□ -0.45
UBR1-207ENST00000568782 TEX13BQ9BXU2 312 aa12.24□□□□□ -0.45
UBR1-207ENST00000568782 FBXO28Q9NVF7 368 aa12.24□□□□□ -0.45
UBR1-207ENST00000568782 ADAMTS5Q9UNA0 930 aa12.24□□□□□ -0.45
UBR1-207ENST00000568782 NR2E3Q9Y5X4 410 aa12.24□□□□□ -0.45
UBR1-207ENST00000568782 PLXNA1Q9UIW2 1896 aa12.23□□□□□ -0.45
UBR1-207ENST00000568782 A0A0G2JMZ2 1700 aa12.23□□□□□ -0.45
UBR1-207ENST00000568782 HOXC6P09630 235 aa12.23□□□□□ -0.45
UBR1-207ENST00000568782 HAND2P61296 217 aa12.23□□□□□ -0.45
UBR1-207ENST00000568782 CACNB2Q08289 660 aaPredicted RBP12.23□□□□□ -0.45
UBR1-207ENST00000568782 TTC22Q5TAA0 569 aa12.23□□□□□ -0.45
UBR1-207ENST00000568782 SNRNP48Q6IEG0 339 aaKnown RBP12.23□□□□□ -0.45
UBR1-207ENST00000568782 ZNF589Q86UQ0 364 aaPredicted RBP12.23□□□□□ -0.45
UBR1-207ENST00000568782 IQCA1Q86XH1 822 aa12.23□□□□□ -0.45
UBR1-207ENST00000568782 CPXCR1Q8N123 301 aa12.23□□□□□ -0.45
UBR1-207ENST00000568782 NUP88Q99567 741 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms