RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 INHAP05111 366 aa5.62□□□□□ -1.51
HERPUD1-213ENST00000568358 ELNP15502 786 aa5.62□□□□□ -1.51
HERPUD1-213ENST00000568358 VAMP1P23763 118 aa5.62□□□□□ -1.51
HERPUD1-213ENST00000568358 MAPK4P31152 587 aa5.62□□□□□ -1.51
HERPUD1-213ENST00000568358 HERVK_113P62684 666 aa5.62□□□□□ -1.51
HERPUD1-213ENST00000568358 FOXK1P85037 733 aa5.62□□□□□ -1.51
HERPUD1-213ENST00000568358 USP17L24Q0WX57 530 aa5.62□□□□□ -1.51
HERPUD1-213ENST00000568358 DSG2Q14126 1118 aa5.62□□□□□ -1.51
HERPUD1-213ENST00000568358 RRP1BQ14684 758 aaKnown RBP5.62□□□□□ -1.51
HERPUD1-213ENST00000568358 ZSCAN25Q6NSZ9 544 aa5.62□□□□□ -1.51
HERPUD1-213ENST00000568358 METTL16Q86W50 562 aaKnown RBP5.62□□□□□ -1.51
HERPUD1-213ENST00000568358 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.62□□□□□ -1.51
HERPUD1-213ENST00000568358 SOCS4Q8WXH5 440 aa5.62□□□□□ -1.51
HERPUD1-213ENST00000568358 RNF166Q96A37 237 aaPredicted RBP5.62□□□□□ -1.51
HERPUD1-213ENST00000568358 GPATCH3Q96I76 525 aa5.62□□□□□ -1.51
HERPUD1-213ENST00000568358 DEFB118Q96PH6 123 aa5.62□□□□□ -1.51
HERPUD1-213ENST00000568358 P2RX7Q99572 595 aaKnown RBP5.62□□□□□ -1.51
HERPUD1-213ENST00000568358 UNC93B1Q9H1C4 597 aa5.62□□□□□ -1.51
HERPUD1-213ENST00000568358 EHD4Q9H223 541 aa5.62□□□□□ -1.51
HERPUD1-213ENST00000568358 ANTXR1Q9H6X2 564 aa5.62□□□□□ -1.51
HERPUD1-213ENST00000568358 HMX1Q9NP08 348 aaPredicted RBP5.62□□□□□ -1.51
HERPUD1-213ENST00000568358 FAM217BQ9NTX9 383 aaPredicted RBP5.62□□□□□ -1.51
HERPUD1-213ENST00000568358 MCM9Q9NXL9 1143 aa5.62□□□□□ -1.51
HERPUD1-213ENST00000568358 HOXC10Q9NYD6 342 aa5.62□□□□□ -1.51
HERPUD1-213ENST00000568358 ZBTB21Q9ULJ3 1066 aa5.62□□□□□ -1.51
HERPUD1-213ENST00000568358 NDUFB9Q9Y6M9 179 aa5.62□□□□□ -1.51
HERPUD1-213ENST00000568358 LOC285556D6RIA3 1793 aa5.62□□□□□ -1.51
HERPUD1-213ENST00000568358 MYH7P12883 1935 aa5.62□□□□□ -1.51
HERPUD1-213ENST00000568358 H0YGN5 161 aa5.61□□□□□ -1.51
HERPUD1-213ENST00000568358 PDE6AP16499 860 aa5.61□□□□□ -1.51
HERPUD1-213ENST00000568358 CYP2B6P20813 491 aa5.61□□□□□ -1.51
HERPUD1-213ENST00000568358 RGS2P41220 211 aa5.61□□□□□ -1.51
HERPUD1-213ENST00000568358 CLK2P49760 499 aaKnown RBP5.61□□□□□ -1.51
HERPUD1-213ENST00000568358 ERVK-9P63128 1117 aa5.61□□□□□ -1.51
HERPUD1-213ENST00000568358 ERVK-24P63145 666 aa5.61□□□□□ -1.51
HERPUD1-213ENST00000568358 ZYXQ15942 572 aaKnown RBP5.61□□□□□ -1.51
HERPUD1-213ENST00000568358 LRRFIP1Q32MZ4 808 aaKnown RBP5.61□□□□□ -1.51
HERPUD1-213ENST00000568358 WDR78Q5VTH9 848 aa5.61□□□□□ -1.51
HERPUD1-213ENST00000568358 TATDN1Q6P1N9 297 aa5.61□□□□□ -1.51
HERPUD1-213ENST00000568358 NECAB2Q7Z6G3 386 aa5.61□□□□□ -1.51
HERPUD1-213ENST00000568358 PLEKHH3Q7Z736 793 aa5.61□□□□□ -1.51
HERPUD1-213ENST00000568358 RPTORQ8N122 1335 aa5.61□□□□□ -1.51
HERPUD1-213ENST00000568358 ANKLE1Q8NAG6 615 aa5.61□□□□□ -1.51
HERPUD1-213ENST00000568358 DRC1Q96MC2 740 aa5.61□□□□□ -1.51
HERPUD1-213ENST00000568358 PHOX2BQ99453 314 aa5.61□□□□□ -1.51
HERPUD1-213ENST00000568358 PAGR1Q9BTK6 254 aa5.61□□□□□ -1.51
HERPUD1-213ENST00000568358 LRRCC1Q9C099 1032 aa5.61□□□□□ -1.51
HERPUD1-213ENST00000568358 BOLA2Q9H3K6 86 aa5.61□□□□□ -1.51
HERPUD1-213ENST00000568358 SH2D4AQ9H788 454 aa5.61□□□□□ -1.51
HERPUD1-213ENST00000568358 ZNF532Q9HCE3 1301 aa5.61□□□□□ -1.51
HERPUD1-213ENST00000568358 ZBTB40Q9NUA8 1239 aa5.61□□□□□ -1.51
HERPUD1-213ENST00000568358 PAG1Q9NWQ8 432 aa5.61□□□□□ -1.51
HERPUD1-213ENST00000568358 ZNFX1Q9P2E3 1918 aaKnown RBP5.61□□□□□ -1.51
HERPUD1-213ENST00000568358 MORF4L1Q9UBU8 362 aa5.61□□□□□ -1.51
HERPUD1-213ENST00000568358 SWAP70Q9UH65 585 aa5.61□□□□□ -1.51
HERPUD1-213ENST00000568358 RABGAP1Q9Y3P9 1069 aa5.61□□□□□ -1.51
HERPUD1-213ENST00000568358 BAZ2AQ9UIF9 1905 aaKnown RBP5.6□□□□□ -1.51
HERPUD1-213ENST00000568358 XRCC5P13010 732 aaKnown RBP5.6□□□□□ -1.51
HERPUD1-213ENST00000568358 ZKSCAN1P17029 563 aaPredicted RBP5.6□□□□□ -1.51
HERPUD1-213ENST00000568358 ATP5JP18859 108 aa5.6□□□□□ -1.51
HERPUD1-213ENST00000568358 PLCD1P51178 756 aa5.6□□□□□ -1.51
HERPUD1-213ENST00000568358 ATP2B2Q01814 1243 aa5.6□□□□□ -1.51
HERPUD1-213ENST00000568358 COG2Q14746 738 aa5.6□□□□□ -1.51
HERPUD1-213ENST00000568358 MFSD14CQ5VZR4 134 aa5.6□□□□□ -1.51
HERPUD1-213ENST00000568358 CATSPERGQ6ZRH7 1159 aa5.6□□□□□ -1.51
HERPUD1-213ENST00000568358 GPR142Q7Z601 462 aa5.6□□□□□ -1.51
HERPUD1-213ENST00000568358 SREK1Q8WXA9 508 aaKnown RBP5.6□□□□□ -1.51
HERPUD1-213ENST00000568358 MRRFQ96E11 262 aaKnown RBP5.6□□□□□ -1.51
HERPUD1-213ENST00000568358 EDC3Q96F86 508 aaKnown RBP5.6□□□□□ -1.51
HERPUD1-213ENST00000568358 CCDC17Q96LX7 622 aa5.6□□□□□ -1.51
HERPUD1-213ENST00000568358 RIOK1Q9BRS2 568 aaKnown RBP5.6□□□□□ -1.51
HERPUD1-213ENST00000568358 NBPF3Q9H094 633 aa5.6□□□□□ -1.51
HERPUD1-213ENST00000568358 KIAA1683Q9H0B3 1180 aa5.6□□□□□ -1.51
HERPUD1-213ENST00000568358 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.6□□□□□ -1.517e-6■■■■□ 23.5
HERPUD1-213ENST00000568358 DNAJC18Q9H819 358 aa5.6□□□□□ -1.51
HERPUD1-213ENST00000568358 ARHGEF10LQ9HCE6 1279 aa5.6□□□□□ -1.51
HERPUD1-213ENST00000568358 PAK6Q9NQU5 681 aaPredicted RBP5.6□□□□□ -1.51
HERPUD1-213ENST00000568358 ATP8A2Q9NTI2 1148 aa5.6□□□□□ -1.51
HERPUD1-213ENST00000568358 POLR3EQ9NVU0 708 aa5.6□□□□□ -1.51
HERPUD1-213ENST00000568358 SLC5A4Q9NY91 659 aa5.6□□□□□ -1.51
HERPUD1-213ENST00000568358 RBPJLQ9UBG7 517 aa5.6□□□□□ -1.51
HERPUD1-213ENST00000568358 GJD2Q9UKL4 321 aa5.6□□□□□ -1.51
HERPUD1-213ENST00000568358 NAV1Q8NEY1 1877 aa5.6□□□□□ -1.51
HERPUD1-213ENST00000568358 SIPA1L1O43166 1804 aa5.6□□□□□ -1.51
HERPUD1-213ENST00000568358 CARNS1A5YM72 827 aa5.59□□□□□ -1.51
HERPUD1-213ENST00000568358 GRXCR2A6NFK2 248 aa5.59□□□□□ -1.51
HERPUD1-213ENST00000568358 SLC15A5A6NIM6 579 aa5.59□□□□□ -1.51
HERPUD1-213ENST00000568358 STRNO43815 780 aa5.59□□□□□ -1.51
HERPUD1-213ENST00000568358 TCF3P15923 654 aa5.59□□□□□ -1.51
HERPUD1-213ENST00000568358 ZNF16P17020 682 aaPredicted RBP5.59□□□□□ -1.51
HERPUD1-213ENST00000568358 VCAM1P19320 739 aa5.59□□□□□ -1.51
HERPUD1-213ENST00000568358 BRD2P25440 801 aaKnown RBP5.59□□□□□ -1.51
HERPUD1-213ENST00000568358 CNGA1P29973 690 aa5.59□□□□□ -1.51
HERPUD1-213ENST00000568358 SHMT1P34896 483 aa5.59□□□□□ -1.51
HERPUD1-213ENST00000568358 PBX2P40425 430 aa5.59□□□□□ -1.51
HERPUD1-213ENST00000568358 JAG1P78504 1218 aa5.59□□□□□ -1.51
HERPUD1-213ENST00000568358 SEPT2Q15019 361 aa5.59□□□□□ -1.51
HERPUD1-213ENST00000568358 UBE3CQ15386 1083 aa5.59□□□□□ -1.51
HERPUD1-213ENST00000568358 Q3C1V9 767 aa5.59□□□□□ -1.51
HERPUD1-213ENST00000568358 TMEM179Q6ZVK1 233 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms