RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 CCDC151A5D8V7 595 aa8.63□□□□□ -1.03
ATXN3-250ENST00000568290 PPP1R3GB7ZBB8 358 aa8.63□□□□□ -1.03
ATXN3-250ENST00000568290 hCG_1984214I3L0E3 225 aa8.63□□□□□ -1.03
ATXN3-250ENST00000568290 BAG3O95817 575 aa8.63□□□□□ -1.03
ATXN3-250ENST00000568290 FGRP09769 529 aa8.63□□□□□ -1.03
ATXN3-250ENST00000568290 EEF1GP26641 437 aaKnown RBP8.63□□□□□ -1.03
ATXN3-250ENST00000568290 NLRP5P59047 1200 aa8.63□□□□□ -1.03
ATXN3-250ENST00000568290 CTDSPL2Q05D32 466 aa8.63□□□□□ -1.03
ATXN3-250ENST00000568290 PPP2R3AQ06190 1150 aa8.63□□□□□ -1.03
ATXN3-250ENST00000568290 CKAP4Q07065 602 aaKnown RBP8.63□□□□□ -1.03
ATXN3-250ENST00000568290 NR1I3Q14994 352 aa8.63□□□□□ -1.03
ATXN3-250ENST00000568290 SF3B3Q15393 1217 aaKnown RBP8.63□□□□□ -1.03
ATXN3-250ENST00000568290 HLFQ16534 295 aa8.63□□□□□ -1.03
ATXN3-250ENST00000568290 SBK1Q52WX2 424 aa8.63□□□□□ -1.03
ATXN3-250ENST00000568290 HSP90B2PQ58FF3 399 aa8.63□□□□□ -1.03
ATXN3-250ENST00000568290 TTC38Q5R3I4 469 aa8.63□□□□□ -1.03
ATXN3-250ENST00000568290 WWC2Q6AWC2 1192 aa8.63□□□□□ -1.03
ATXN3-250ENST00000568290 DGKHQ86XP1 1220 aa8.63□□□□□ -1.03
ATXN3-250ENST00000568290 GPIHBP1Q8IV16 184 aa8.63□□□□□ -1.03
ATXN3-250ENST00000568290 ZNF713Q8N859 430 aaPredicted RBP8.63□□□□□ -1.03
ATXN3-250ENST00000568290 RUBCNQ92622 972 aa8.63□□□□□ -1.03
ATXN3-250ENST00000568290 DDX17Q92841 729 aaKnown RBP8.63□□□□□ -1.03
ATXN3-250ENST00000568290 SYTL4Q96C24 671 aaPredicted RBP8.63□□□□□ -1.03
ATXN3-250ENST00000568290 AK8Q96MA6 479 aa8.63□□□□□ -1.03
ATXN3-250ENST00000568290 RAB34Q9BZG1 259 aa8.63□□□□□ -1.03
ATXN3-250ENST00000568290 KAT14Q9H8E8 782 aa8.63□□□□□ -1.03
ATXN3-250ENST00000568290 CABP5Q9NP86 173 aa8.63□□□□□ -1.03
ATXN3-250ENST00000568290 LUC7LQ9NQ29 371 aaKnown RBP8.63□□□□□ -1.03
ATXN3-250ENST00000568290 BTG4Q9NY30 223 aa8.63□□□□□ -1.03
ATXN3-250ENST00000568290 SERTAD1Q9UHV2 236 aa8.63□□□□□ -1.03
ATXN3-250ENST00000568290 ZBTB1Q9Y2K1 713 aa8.63□□□□□ -1.03
ATXN3-250ENST00000568290 DISP2A7MBM2 1401 aa8.63□□□□□ -1.03
ATXN3-250ENST00000568290 ZNF804BA4D1E1 1349 aa8.62□□□□□ -1.03
ATXN3-250ENST00000568290 A0A0U1RQG5 324 aaPredicted RBP8.62□□□□□ -1.03
ATXN3-250ENST00000568290 MINDY4BA8MYZ0 360 aa8.62□□□□□ -1.03
ATXN3-250ENST00000568290 ARHGAP33O14559 1287 aa8.62□□□□□ -1.03
ATXN3-250ENST00000568290 PSMA7O14818 248 aa8.62□□□□□ -1.03
ATXN3-250ENST00000568290 RANBP6O60518 1105 aaKnown RBP8.62□□□□□ -1.03
ATXN3-250ENST00000568290 ZMYND10O75800 440 aa8.62□□□□□ -1.03
ATXN3-250ENST00000568290 CHGBP05060 677 aa8.62□□□□□ -1.03
ATXN3-250ENST00000568290 CYLC1P35663 651 aaPredicted RBP8.62□□□□□ -1.03
ATXN3-250ENST00000568290 ATP6V1AP38606 617 aa8.62□□□□□ -1.03
ATXN3-250ENST00000568290 PRPHP41219 470 aa8.62□□□□□ -1.03
ATXN3-250ENST00000568290 PSEN2P49810 448 aa8.62□□□□□ -1.03
ATXN3-250ENST00000568290 ATP2C1P98194 919 aaPredicted RBP8.62□□□□□ -1.03
ATXN3-250ENST00000568290 CHRNDQ07001 517 aa8.62□□□□□ -1.03
ATXN3-250ENST00000568290 PAK1Q13153 545 aa8.62□□□□□ -1.03
ATXN3-250ENST00000568290 SF3B2Q13435 895 aaKnown RBP8.62□□□□□ -1.03
ATXN3-250ENST00000568290 COL9A3Q14050 684 aaPredicted RBP8.62□□□□□ -1.03
ATXN3-250ENST00000568290 KCNB1Q14721 858 aa8.62□□□□□ -1.03
ATXN3-250ENST00000568290 DDB1Q16531 1140 aa8.62□□□□□ -1.03
ATXN3-250ENST00000568290 KMT5BQ4FZB7 885 aa8.62□□□□□ -1.03
ATXN3-250ENST00000568290 STK11IPQ8N1F8 1099 aa8.62□□□□□ -1.03
ATXN3-250ENST00000568290 IGSF22Q8N9C0 903 aa8.62□□□□□ -1.03
ATXN3-250ENST00000568290 RASSF8Q8NHQ8 419 aa8.62□□□□□ -1.03
ATXN3-250ENST00000568290 HNRNPLLQ8WVV9 542 aaKnown RBP8.62□□□□□ -1.03
ATXN3-250ENST00000568290 NAP1L4Q99733 375 aaKnown RBP8.62□□□□□ -1.03
ATXN3-250ENST00000568290 KRTAP3-3Q9BYR6 98 aa8.62□□□□□ -1.03
ATXN3-250ENST00000568290 KRTAP3-2Q9BYR7 98 aa8.62□□□□□ -1.03
ATXN3-250ENST00000568290 TSGA10Q9BZW7 698 aa8.62□□□□□ -1.03
ATXN3-250ENST00000568290 NBPF3Q9H094 633 aa8.62□□□□□ -1.03
ATXN3-250ENST00000568290 HAUS4Q9H6D7 363 aa8.62□□□□□ -1.03
ATXN3-250ENST00000568290 FAM217BQ9NTX9 383 aaPredicted RBP8.62□□□□□ -1.03
ATXN3-250ENST00000568290 TCP11L1Q9NUJ3 509 aa8.62□□□□□ -1.03
ATXN3-250ENST00000568290 ABCF2Q9UG63 623 aa8.62□□□□□ -1.03
ATXN3-250ENST00000568290 NIP7Q9Y221 180 aaKnown RBP eCLIP8.62□□□□□ -1.03
ATXN3-250ENST00000568290 DDX60Q8IY21 1712 aaKnown RBP8.62□□□□□ -1.03
ATXN3-250ENST00000568290 NWD2Q9ULI1 1742 aa8.61□□□□□ -1.03
ATXN3-250ENST00000568290 CCDC194A0A1B0GVG4 234 aa8.61□□□□□ -1.03
ATXN3-250ENST00000568290 A0A1W2PQC6 194 aa8.61□□□□□ -1.03
ATXN3-250ENST00000568290 LRRC10BA6NIK2 292 aa8.61□□□□□ -1.03
ATXN3-250ENST00000568290 TSPY2A6NKD2 308 aa8.61□□□□□ -1.03
ATXN3-250ENST00000568290 USP27XA6NNY8 438 aa8.61□□□□□ -1.03
ATXN3-250ENST00000568290 A6NNZ2 444 aa8.61□□□□□ -1.03
ATXN3-250ENST00000568290 N4BP3O15049 544 aa8.61□□□□□ -1.03
ATXN3-250ENST00000568290 ACTN4O43707 911 aaKnown RBP8.61□□□□□ -1.03
ATXN3-250ENST00000568290 TADA3O75528 432 aa8.61□□□□□ -1.03
ATXN3-250ENST00000568290 SCG2P13521 617 aa8.61□□□□□ -1.03
ATXN3-250ENST00000568290 SMARCA1P28370 1054 aa8.61□□□□□ -1.03
ATXN3-250ENST00000568290 GNA11P29992 359 aa8.61□□□□□ -1.03
ATXN3-250ENST00000568290 SEC23AQ15436 765 aa8.61□□□□□ -1.03
ATXN3-250ENST00000568290 TERF2Q15554 542 aa8.61□□□□□ -1.03
ATXN3-250ENST00000568290 TUBB8Q3ZCM7 444 aa8.61□□□□□ -1.03
ATXN3-250ENST00000568290 ZNF658Q5TYW1 1059 aaPredicted RBP8.61□□□□□ -1.03
ATXN3-250ENST00000568290 SUSD4Q5VX71 490 aa8.61□□□□□ -1.03
ATXN3-250ENST00000568290 DMRTA1Q5VZB9 504 aa8.61□□□□□ -1.03
ATXN3-250ENST00000568290 FBXO38Q6PIJ6 1188 aa8.61□□□□□ -1.03
ATXN3-250ENST00000568290 PI16Q6UXB8 463 aa8.61□□□□□ -1.03
ATXN3-250ENST00000568290 DTHD1Q6ZMT9 781 aa8.61□□□□□ -1.03
ATXN3-250ENST00000568290 ARHGAP27Q6ZUM4 889 aa8.61□□□□□ -1.03
ATXN3-250ENST00000568290 TMTC3Q6ZXV5 915 aa8.61□□□□□ -1.03
ATXN3-250ENST00000568290 HDXQ7Z353 690 aa8.61□□□□□ -1.03
ATXN3-250ENST00000568290 SRGAP1Q7Z6B7 1085 aa8.61□□□□□ -1.03
ATXN3-250ENST00000568290 SH3RF1Q7Z6J0 888 aa8.61□□□□□ -1.03
ATXN3-250ENST00000568290 REXO1L1PQ8IX06 675 aa8.61□□□□□ -1.03
ATXN3-250ENST00000568290 WDR66Q8TBY9 1149 aa8.61□□□□□ -1.03
ATXN3-250ENST00000568290 DHX58Q96C10 678 aa8.61□□□□□ -1.03
ATXN3-250ENST00000568290 CLIC6Q96NY7 704 aa8.61□□□□□ -1.03
ATXN3-250ENST00000568290 NLRP3Q96P20 1036 aa8.61□□□□□ -1.03
ATXN3-250ENST00000568290 ARID3AQ99856 593 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 446.4 ms