RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 RABGAP1Q9Y3P9 1069 aa15.35■□□□□ 0.05
CNOT1-213ENST00000568158 MGAMO43451 1857 aa15.34■□□□□ 0.05
CNOT1-213ENST00000568158 MCCP23508 829 aa15.34■□□□□ 0.05
CNOT1-213ENST00000568158 FCGRTP55899 365 aa15.34■□□□□ 0.05
CNOT1-213ENST00000568158 ERVK-9P63128 1117 aa15.34■□□□□ 0.05
CNOT1-213ENST00000568158 ERVK-24P63145 666 aa15.34■□□□□ 0.05
CNOT1-213ENST00000568158 RCSD1Q6JBY9 416 aa15.34■□□□□ 0.05
CNOT1-213ENST00000568158 CASC1Q6TDU7 716 aa15.34■□□□□ 0.05
CNOT1-213ENST00000568158 LBX2Q6XYB7 198 aa15.34■□□□□ 0.05
CNOT1-213ENST00000568158 CYB5R4Q7L1T6 521 aa15.34■□□□□ 0.05
CNOT1-213ENST00000568158 GMCL1P1Q8NEA9 526 aa15.34■□□□□ 0.05
CNOT1-213ENST00000568158 ATG4CQ96DT6 458 aa15.34■□□□□ 0.05
CNOT1-213ENST00000568158 KRT23Q9C075 422 aa15.34■□□□□ 0.05
CNOT1-213ENST00000568158 RLFQ13129 1914 aa15.34■□□□□ 0.05
CNOT1-213ENST00000568158 E7EWF7 191 aa15.33■□□□□ 0.04
CNOT1-213ENST00000568158 HOXD10P28358 340 aa15.33■□□□□ 0.04
CNOT1-213ENST00000568158 NECTIN1Q15223 517 aa15.33■□□□□ 0.04
CNOT1-213ENST00000568158 PPP4R3BQ5MIZ7 849 aa15.33■□□□□ 0.04
CNOT1-213ENST00000568158 STOX1Q6ZVD7 989 aa15.33■□□□□ 0.04
CNOT1-213ENST00000568158 GTF3C2Q8WUA4 911 aaPredicted RBP15.33■□□□□ 0.04
CNOT1-213ENST00000568158 TTC14Q96N46 770 aa15.33■□□□□ 0.04
CNOT1-213ENST00000568158 PORCNQ9H237 461 aa15.33■□□□□ 0.04
CNOT1-213ENST00000568158 SRRDQ9UH36 339 aa15.33■□□□□ 0.04
CNOT1-213ENST00000568158 HPS5Q9UPZ3 1129 aa15.33■□□□□ 0.04
CNOT1-213ENST00000568158 PTCH2Q9Y6C5 1203 aa15.33■□□□□ 0.04
CNOT1-213ENST00000568158 LAMA4Q16363 1823 aa15.33■□□□□ 0.04
CNOT1-213ENST00000568158 TNPO2O14787 897 aaKnown RBP15.32■□□□□ 0.04
CNOT1-213ENST00000568158 SLC27A2O14975 620 aa15.32■□□□□ 0.04
CNOT1-213ENST00000568158 GNRH1P01148 92 aa15.32■□□□□ 0.04
CNOT1-213ENST00000568158 TOP1P11387 765 aaKnown RBP15.32■□□□□ 0.04
CNOT1-213ENST00000568158 BMP3P12645 472 aa15.32■□□□□ 0.04
CNOT1-213ENST00000568158 RASGRP2Q7LDG7 609 aa15.32■□□□□ 0.04
CNOT1-213ENST00000568158 CNNM2Q9H8M5 875 aa15.32■□□□□ 0.04
CNOT1-213ENST00000568158 SYNPO2Q9UMS6 1093 aa15.32■□□□□ 0.04
CNOT1-213ENST00000568158 ADAMTS5Q9UNA0 930 aa15.32■□□□□ 0.04
CNOT1-213ENST00000568158 TMEM232C9JQI7 657 aa15.31■□□□□ 0.04
CNOT1-213ENST00000568158 SLC1A4P43007 532 aa15.31■□□□□ 0.04
CNOT1-213ENST00000568158 PRKCZQ05513 592 aa15.31■□□□□ 0.04
CNOT1-213ENST00000568158 TRDNQ13061 729 aa15.31■□□□□ 0.04
CNOT1-213ENST00000568158 PLS1Q14651 629 aa15.31■□□□□ 0.04
CNOT1-213ENST00000568158 CREB3L3Q68CJ9 461 aa15.31■□□□□ 0.04
CNOT1-213ENST00000568158 KCTD1Q719H9 257 aa15.31■□□□□ 0.04
CNOT1-213ENST00000568158 CHST3Q7LGC8 479 aa15.31■□□□□ 0.04
CNOT1-213ENST00000568158 IQCA1Q86XH1 822 aa15.31■□□□□ 0.04
CNOT1-213ENST00000568158 DGKHQ86XP1 1220 aa15.31■□□□□ 0.04
CNOT1-213ENST00000568158 COA7Q96BR5 231 aa15.31■□□□□ 0.04
CNOT1-213ENST00000568158 ZSCAN10Q96SZ4 725 aaPredicted RBP15.31■□□□□ 0.04
CNOT1-213ENST00000568158 GJD2Q9UKL4 321 aa15.31■□□□□ 0.04
CNOT1-213ENST00000568158 PPP1R9AQ9ULJ8 1098 aa15.31■□□□□ 0.04
CNOT1-213ENST00000568158 ISY1Q9ULR0 285 aaKnown RBP15.31■□□□□ 0.04
CNOT1-213ENST00000568158 CCDC85CA6NKD9 419 aa15.3■□□□□ 0.04
CNOT1-213ENST00000568158 VWA5AO00534 786 aa15.3■□□□□ 0.04
CNOT1-213ENST00000568158 FLT3LGP49771 235 aa15.3■□□□□ 0.04
CNOT1-213ENST00000568158 PRMT2P55345 433 aa15.3■□□□□ 0.04
CNOT1-213ENST00000568158 TMEM132BQ14DG7 1078 aa15.3■□□□□ 0.04
CNOT1-213ENST00000568158 CCDC178Q5BJE1 867 aa15.3■□□□□ 0.04
CNOT1-213ENST00000568158 TTBK2Q6IQ55 1244 aa15.3■□□□□ 0.04
CNOT1-213ENST00000568158 MYPNQ86TC9 1320 aa15.3■□□□□ 0.04
CNOT1-213ENST00000568158 CCAR1Q8IX12 1150 aaKnown RBP15.3■□□□□ 0.04
CNOT1-213ENST00000568158 PRPF38AQ8NAV1 312 aaKnown RBP15.3■□□□□ 0.04
CNOT1-213ENST00000568158 NCOA7Q8NI08 942 aa15.3■□□□□ 0.04
CNOT1-213ENST00000568158 SP7Q8TDD2 431 aaPredicted RBP15.3■□□□□ 0.04
CNOT1-213ENST00000568158 ANKS1AQ92625 1134 aa15.3■□□□□ 0.04
CNOT1-213ENST00000568158 KIFC2Q96AC6 838 aa15.3■□□□□ 0.04
CNOT1-213ENST00000568158 GMCL1Q96IK5 515 aa15.3■□□□□ 0.04
CNOT1-213ENST00000568158 SLF1Q9BQI6 1058 aa15.3■□□□□ 0.04
CNOT1-213ENST00000568158 MOV10L1Q9BXT6 1211 aaKnown RBP15.3■□□□□ 0.04
CNOT1-213ENST00000568158 FEM1BQ9UK73 627 aa15.3■□□□□ 0.04
CNOT1-213ENST00000568158 PARP14Q460N5 1801 aa15.29■□□□□ 0.04
CNOT1-213ENST00000568158 NT5C2P49902 561 aa15.29■□□□□ 0.04
CNOT1-213ENST00000568158 CCNA1P78396 465 aa15.29■□□□□ 0.04
CNOT1-213ENST00000568158 COL9A3Q14050 684 aaPredicted RBP15.29■□□□□ 0.04
CNOT1-213ENST00000568158 WDR78Q5VTH9 848 aa15.29■□□□□ 0.04
CNOT1-213ENST00000568158 GPR142Q7Z601 462 aa15.29■□□□□ 0.04
CNOT1-213ENST00000568158 ENAHQ8N8S7 591 aaPredicted RBP15.29■□□□□ 0.04
CNOT1-213ENST00000568158 RAET1EQ8TD07 263 aa15.29■□□□□ 0.04
CNOT1-213ENST00000568158 SPATC1LQ9H0A9 340 aa15.29■□□□□ 0.04
CNOT1-213ENST00000568158 GPCPD1Q9NPB8 672 aa15.29■□□□□ 0.04
CNOT1-213ENST00000568158 TNKSO95271 1327 aa15.28■□□□□ 0.04
CNOT1-213ENST00000568158 FRMPD2Q68DX3 1309 aaPredicted RBP15.28■□□□□ 0.04
CNOT1-213ENST00000568158 MAPK4P31152 587 aa15.28■□□□□ 0.04
CNOT1-213ENST00000568158 SLC4A3P48751 1232 aa15.28■□□□□ 0.04
CNOT1-213ENST00000568158 SNAP25P60880 206 aa15.28■□□□□ 0.04
CNOT1-213ENST00000568158 SEC23AQ15436 765 aa15.28■□□□□ 0.04
CNOT1-213ENST00000568158 CCDC96Q2M329 555 aa15.28■□□□□ 0.04
CNOT1-213ENST00000568158 PLEKHH3Q7Z736 793 aa15.28■□□□□ 0.04
CNOT1-213ENST00000568158 RALYLQ86SE5 291 aaKnown RBP15.28■□□□□ 0.04
CNOT1-213ENST00000568158 MB21D1Q8N884 522 aa15.28■□□□□ 0.04
CNOT1-213ENST00000568158 REPS2Q8NFH8 660 aa15.28■□□□□ 0.04
CNOT1-213ENST00000568158 SH3TC2Q8TF17 1288 aa15.28■□□□□ 0.04
CNOT1-213ENST00000568158 CHURC1Q8WUH1 139 aa15.28■□□□□ 0.04
CNOT1-213ENST00000568158 DCAF4Q8WV16 495 aa15.28■□□□□ 0.04
CNOT1-213ENST00000568158 UBAC1Q9BSL1 405 aa15.28■□□□□ 0.04
CNOT1-213ENST00000568158 SENP2Q9HC62 589 aa15.28■□□□□ 0.04
CNOT1-213ENST00000568158 COL11A1P12107 1806 aaPredicted RBP15.28■□□□□ 0.04
CNOT1-213ENST00000568158 IFIT3O14879 490 aaKnown RBP15.27■□□□□ 0.04
CNOT1-213ENST00000568158 ZBED4O75132 1171 aa15.27■□□□□ 0.04
CNOT1-213ENST00000568158 PDHBP11177 359 aa15.27■□□□□ 0.04
CNOT1-213ENST00000568158 ERCC3P19447 782 aa15.27■□□□□ 0.04
CNOT1-213ENST00000568158 CYP2B6P20813 491 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms