RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 DSC3Q14574 896 aa7.5□□□□□ -1.21
CAPN3-218ENST00000568153 RABL6Q3YEC7 729 aaPredicted RBP7.5□□□□□ -1.21
CAPN3-218ENST00000568153 EPHA10Q5JZY3 1008 aa7.5□□□□□ -1.21
CAPN3-218ENST00000568153 PERM1Q5SV97 790 aa7.5□□□□□ -1.21
CAPN3-218ENST00000568153 TTC22Q5TAA0 569 aa7.5□□□□□ -1.21
CAPN3-218ENST00000568153 GPAT2Q6NUI2 795 aa7.5□□□□□ -1.21
CAPN3-218ENST00000568153 LMBR1LQ6UX01 489 aa7.5□□□□□ -1.21
CAPN3-218ENST00000568153 FAM196AQ6ZSG2 479 aa7.5□□□□□ -1.21
CAPN3-218ENST00000568153 ZSCAN29Q8IWY8 852 aaPredicted RBP7.5□□□□□ -1.21
CAPN3-218ENST00000568153 CLASRPQ8N2M8 674 aaKnown RBP7.5□□□□□ -1.21
CAPN3-218ENST00000568153 ZBTB38Q8NAP3 1195 aaPredicted RBP7.5□□□□□ -1.21
CAPN3-218ENST00000568153 PLVAPQ9BX97 442 aa7.5□□□□□ -1.21
CAPN3-218ENST00000568153 ZFYVE28Q9HCC9 887 aa7.5□□□□□ -1.21
CAPN3-218ENST00000568153 COL15A1P39059 1388 aa7.49□□□□□ -1.21
CAPN3-218ENST00000568153 IFIT2P09913 472 aaKnown RBP7.49□□□□□ -1.21
CAPN3-218ENST00000568153 EIF2AK2P19525 551 aaKnown RBP7.49□□□□□ -1.21
CAPN3-218ENST00000568153 MX1P20591 662 aa7.49□□□□□ -1.21
CAPN3-218ENST00000568153 RBM6P78332 1123 aaKnown RBP7.49□□□□□ -1.21
CAPN3-218ENST00000568153 HYAL2Q12891 473 aa7.49□□□□□ -1.21
CAPN3-218ENST00000568153 USPL1Q5W0Q7 1092 aa7.49□□□□□ -1.21
CAPN3-218ENST00000568153 PSAPL1Q6NUJ1 521 aa7.49□□□□□ -1.21
CAPN3-218ENST00000568153 CASC1Q6TDU7 716 aa7.49□□□□□ -1.21
CAPN3-218ENST00000568153 DNAJC14Q6Y2X3 702 aaPredicted RBP7.49□□□□□ -1.21
CAPN3-218ENST00000568153 KRT27Q7Z3Y8 459 aa7.49□□□□□ -1.21
CAPN3-218ENST00000568153 NLRP10Q86W26 655 aa7.49□□□□□ -1.21
CAPN3-218ENST00000568153 ZNF34Q8IZ26 560 aa7.49□□□□□ -1.21
CAPN3-218ENST00000568153 OTUD7AQ8TE49 926 aaPredicted RBP7.49□□□□□ -1.21
CAPN3-218ENST00000568153 NUDT8Q8WV74 236 aa7.49□□□□□ -1.21
CAPN3-218ENST00000568153 LPIN3Q9BQK8 851 aa7.49□□□□□ -1.21
CAPN3-218ENST00000568153 IL1RAPL2Q9NP60 686 aa7.49□□□□□ -1.21
CAPN3-218ENST00000568153 COPRSQ9NQ92 184 aa7.49□□□□□ -1.21
CAPN3-218ENST00000568153 TRMT112Q9UI30 125 aaKnown RBP7.49□□□□□ -1.21
CAPN3-218ENST00000568153 SALL4Q9UJQ4 1053 aa7.49□□□□□ -1.21
CAPN3-218ENST00000568153 PA2G4Q9UQ80 394 aaKnown RBP7.49□□□□□ -1.21
CAPN3-218ENST00000568153 ATRNO75882 1429 aa7.49□□□□□ -1.21
CAPN3-218ENST00000568153 CDC45O75419 566 aa7.48□□□□□ -1.21
CAPN3-218ENST00000568153 RPS6KA4O75676 772 aa7.48□□□□□ -1.21
CAPN3-218ENST00000568153 IGHA1P01876 353 aa7.48□□□□□ -1.21
CAPN3-218ENST00000568153 HSP90B1P14625 803 aaKnown RBP7.48□□□□□ -1.21
CAPN3-218ENST00000568153 SDSP20132 328 aa7.48□□□□□ -1.21
CAPN3-218ENST00000568153 GPTP24298 496 aa7.48□□□□□ -1.21
CAPN3-218ENST00000568153 RFX5P48382 616 aaPredicted RBP7.48□□□□□ -1.21
CAPN3-218ENST00000568153 PTPN12Q05209 780 aaKnown RBP7.48□□□□□ -1.21
CAPN3-218ENST00000568153 TMCO4Q5TGY1 634 aa7.48□□□□□ -1.21
CAPN3-218ENST00000568153 CLEC4GQ6UXB4 293 aa7.48□□□□□ -1.21
CAPN3-218ENST00000568153 PTF1AQ7RTS3 328 aa7.48□□□□□ -1.21
CAPN3-218ENST00000568153 NCAPG2Q86XI2 1143 aa7.48□□□□□ -1.21
CAPN3-218ENST00000568153 LINC00116Q8NCU8 138 aa7.48□□□□□ -1.21
CAPN3-218ENST00000568153 PMEPA1Q969W9 287 aa7.48□□□□□ -1.21
CAPN3-218ENST00000568153 FAM89AQ96GI7 184 aa7.48□□□□□ -1.21
CAPN3-218ENST00000568153 IPO9Q96P70 1041 aaKnown RBP7.48□□□□□ -1.21
CAPN3-218ENST00000568153 PLA2G12BQ9BX93 195 aa7.48□□□□□ -1.21
CAPN3-218ENST00000568153 CCNL1Q9UK58 526 aaPredicted RBP7.48□□□□□ -1.21
CAPN3-218ENST00000568153 NWD2Q9ULI1 1742 aa7.48□□□□□ -1.21
CAPN3-218ENST00000568153 ZNF652Q9Y2D9 606 aa7.48□□□□□ -1.21
CAPN3-218ENST00000568153 AOX1Q06278 1338 aa7.48□□□□□ -1.21
CAPN3-218ENST00000568153 CACNA1FO60840 1977 aa7.48□□□□□ -1.21
CAPN3-218ENST00000568153 ANKRD33BA6NCL7 494 aa7.47□□□□□ -1.21
CAPN3-218ENST00000568153 EIF1AYO14602 144 aaKnown RBP7.47□□□□□ -1.21
CAPN3-218ENST00000568153 ERC2O15083 957 aa7.47□□□□□ -1.21
CAPN3-218ENST00000568153 LILRB5O75023 590 aa7.47□□□□□ -1.21
CAPN3-218ENST00000568153 SASH1O94885 1247 aa7.47□□□□□ -1.21
CAPN3-218ENST00000568153 GHRHP01286 108 aa7.47□□□□□ -1.21
CAPN3-218ENST00000568153 PROCP04070 461 aa7.47□□□□□ -1.21
CAPN3-218ENST00000568153 POLR3DP05423 398 aaPredicted RBP7.47□□□□□ -1.21
CAPN3-218ENST00000568153 CSF1RP07333 972 aa7.47□□□□□ -1.21
CAPN3-218ENST00000568153 ACPPP15309 386 aa7.47□□□□□ -1.21
CAPN3-218ENST00000568153 RXRBP28702 533 aa7.47□□□□□ -1.21
CAPN3-218ENST00000568153 ATP11AP98196 1134 aa7.47□□□□□ -1.21
CAPN3-218ENST00000568153 PLCB3Q01970 1234 aa7.47□□□□□ -1.21
CAPN3-218ENST00000568153 CCDC57Q2TAC2 916 aa7.47□□□□□ -1.21
CAPN3-218ENST00000568153 PARP10Q53GL7 1025 aa7.47□□□□□ -1.21
CAPN3-218ENST00000568153 ELMSAN1Q6PJG2 1045 aa7.47□□□□□ -1.21
CAPN3-218ENST00000568153 CEP120Q8N960 986 aa7.47□□□□□ -1.21
CAPN3-218ENST00000568153 PLD4Q96BZ4 506 aa7.47□□□□□ -1.21
CAPN3-218ENST00000568153 GPATCH3Q96I76 525 aa7.47□□□□□ -1.21
CAPN3-218ENST00000568153 SPOCK3Q9BQ16 436 aa7.47□□□□□ -1.21
CAPN3-218ENST00000568153 UTP14AQ9BVJ6 771 aaKnown RBP7.47□□□□□ -1.21
CAPN3-218ENST00000568153 SMG9Q9H0W8 520 aaKnown RBP7.47□□□□□ -1.21
CAPN3-218ENST00000568153 SIL1Q9H173 461 aa7.47□□□□□ -1.21
CAPN3-218ENST00000568153 JPH1Q9HDC5 661 aaPredicted RBP7.47□□□□□ -1.21
CAPN3-218ENST00000568153 FRRS1LQ9P0K9 344 aa7.47□□□□□ -1.21
CAPN3-218ENST00000568153 PLCH1Q4KWH8 1693 aa7.47□□□□□ -1.21
CAPN3-218ENST00000568153 NRAPQ86VF7 1730 aa7.47□□□□□ -1.21
CAPN3-218ENST00000568153 IRS4O14654 1257 aaPredicted RBP7.46□□□□□ -1.22
CAPN3-218ENST00000568153 PDE8AO60658 829 aa7.46□□□□□ -1.22
CAPN3-218ENST00000568153 CPNE3O75131 537 aaKnown RBP7.46□□□□□ -1.22
CAPN3-218ENST00000568153 CAMTA2O94983 1202 aa7.46□□□□□ -1.22
CAPN3-218ENST00000568153 GSPT1P15170 499 aaKnown RBP7.46□□□□□ -1.22
CAPN3-218ENST00000568153 IL15P40933 162 aaPredicted RBP7.46□□□□□ -1.22
CAPN3-218ENST00000568153 MFAP1P55081 439 aaKnown RBP7.46□□□□□ -1.22
CAPN3-218ENST00000568153 FMR1Q06787 632 aaKnown RBP eCLIP7.46□□□□□ -1.22
CAPN3-218ENST00000568153 IFIT5Q13325 482 aaKnown RBP7.46□□□□□ -1.22
CAPN3-218ENST00000568153 TRAPPC3LQ5T215 181 aa7.46□□□□□ -1.22
CAPN3-218ENST00000568153 SUSD4Q5VX71 490 aa7.46□□□□□ -1.22
CAPN3-218ENST00000568153 AACSQ86V21 672 aa7.46□□□□□ -1.22
CAPN3-218ENST00000568153 KLHDC4Q8TBB5 520 aa7.46□□□□□ -1.22
CAPN3-218ENST00000568153 RILPL2Q969X0 211 aa7.46□□□□□ -1.22
CAPN3-218ENST00000568153 CSRNP1Q96S65 589 aa7.46□□□□□ -1.22
CAPN3-218ENST00000568153 C22orf23Q9BZE7 217 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms