RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 SGPL1O95470 568 aa29.9■■■□□ 2.38
FANCA-228ENST00000567943 FGAP02671 866 aa29.9■■■□□ 2.38
FANCA-228ENST00000567943 GSPT1P15170 499 aaKnown RBP29.9■■■□□ 2.38
FANCA-228ENST00000567943 KLRC3Q07444 240 aa29.9■■■□□ 2.38
FANCA-228ENST00000567943 MAP3K21Q5TCX8 1036 aa29.9■■■□□ 2.38
FANCA-228ENST00000567943 NKX2-3Q8TAU0 364 aa29.9■■■□□ 2.38
FANCA-228ENST00000567943 MKL1Q969V6 931 aa29.9■■■□□ 2.38
FANCA-228ENST00000567943 DEFB118Q96PH6 123 aa29.9■■■□□ 2.38
FANCA-228ENST00000567943 HIP1O00291 1037 aa29.89■■■□□ 2.38
FANCA-228ENST00000567943 NDUFB10O96000 172 aa29.89■■■□□ 2.38
FANCA-228ENST00000567943 HSPD1P10809 573 aaKnown RBP29.89■■■□□ 2.38
FANCA-228ENST00000567943 RGS2P41220 211 aa29.89■■■□□ 2.38
FANCA-228ENST00000567943 MAP2K5Q13163 448 aa29.89■■■□□ 2.38
FANCA-228ENST00000567943 GRB14Q14449 540 aa29.89■■■□□ 2.38
FANCA-228ENST00000567943 CWC27Q6UX04 472 aaKnown RBP29.89■■■□□ 2.38
FANCA-228ENST00000567943 MB21D1Q8N884 522 aa29.89■■■□□ 2.38
FANCA-228ENST00000567943 ZNF236Q9UL36 1845 aa29.88■■■□□ 2.37
FANCA-228ENST00000567943 TFAP4Q01664 338 aa29.88■■■□□ 2.37
FANCA-228ENST00000567943 TMEM132BQ14DG7 1078 aa29.88■■■□□ 2.37
FANCA-228ENST00000567943 WDR78Q5VTH9 848 aa29.88■■■□□ 2.37
FANCA-228ENST00000567943 XRN2Q9H0D6 950 aaKnown RBP eCLIP29.88■■■□□ 2.372e-7■■■□□ 16.8
FANCA-228ENST00000567943 ZNFX1Q9P2E3 1918 aaKnown RBP29.88■■■□□ 2.37
FANCA-228ENST00000567943 SLC15A5A6NIM6 579 aa29.87■■■□□ 2.37
FANCA-228ENST00000567943 RAD21O60216 631 aa29.87■■■□□ 2.37
FANCA-228ENST00000567943 FGRP09769 529 aa29.87■■■□□ 2.37
FANCA-228ENST00000567943 TSPY3P0CV98 308 aa29.87■■■□□ 2.37
FANCA-228ENST00000567943 TSPY8P0CW00 308 aa29.87■■■□□ 2.37
FANCA-228ENST00000567943 SAMD1Q6SPF0 538 aaPredicted RBP29.87■■■□□ 2.37
FANCA-228ENST00000567943 APBA2Q99767 749 aa29.87■■■□□ 2.37
FANCA-228ENST00000567943 CRISPLD2Q9H0B8 497 aa29.87■■■□□ 2.37
FANCA-228ENST00000567943 FLRT1Q9NZU1 646 aa29.87■■■□□ 2.37
FANCA-228ENST00000567943 PPP1R9AQ9ULJ8 1098 aa29.87■■■□□ 2.37
FANCA-228ENST00000567943 TTLL1O95922 423 aa29.86■■■□□ 2.37
FANCA-228ENST00000567943 ERCC3P19447 782 aa29.86■■■□□ 2.37
FANCA-228ENST00000567943 MFAP1P55081 439 aaKnown RBP29.86■■■□□ 2.37
FANCA-228ENST00000567943 PRPF38BQ5VTL8 546 aaKnown RBP29.86■■■□□ 2.37
FANCA-228ENST00000567943 LRRC47Q8N1G4 583 aaKnown RBP29.86■■■□□ 2.37
FANCA-228ENST00000567943 SHCBP1Q8NEM2 672 aa29.86■■■□□ 2.37
FANCA-228ENST00000567943 REPS2Q8NFH8 660 aa29.86■■■□□ 2.37
FANCA-228ENST00000567943 CWC22Q9HCG8 908 aaKnown RBP29.86■■■□□ 2.37
FANCA-228ENST00000567943 IL17RBQ9NRM6 502 aa29.86■■■□□ 2.37
FANCA-228ENST00000567943 RPTORQ8N122 1335 aa29.86■■■□□ 2.37
FANCA-228ENST00000567943 VWA5AO00534 786 aa29.85■■■□□ 2.37
FANCA-228ENST00000567943 HOXC6P09630 235 aa29.85■■■□□ 2.37
FANCA-228ENST00000567943 PRKAR2AP13861 404 aaKnown RBP29.85■■■□□ 2.37
FANCA-228ENST00000567943 ZMYM6O95789 1325 aa29.85■■■□□ 2.37
FANCA-228ENST00000567943 ZKSCAN1P17029 563 aaPredicted RBP29.84■■■□□ 2.37
FANCA-228ENST00000567943 CACNB2Q08289 660 aaPredicted RBP29.84■■■□□ 2.37
FANCA-228ENST00000567943 PLS1Q14651 629 aa29.84■■■□□ 2.37
FANCA-228ENST00000567943 NPLOC4Q8TAT6 608 aa29.84■■■□□ 2.37
FANCA-228ENST00000567943 NBPF3Q9H094 633 aa29.84■■■□□ 2.37
FANCA-228ENST00000567943 HMX1Q9NP08 348 aaPredicted RBP29.84■■■□□ 2.37
FANCA-228ENST00000567943 ORC4O43929 436 aa29.83■■■□□ 2.37
FANCA-228ENST00000567943 NMT2O60551 498 aa29.83■■■□□ 2.37
FANCA-228ENST00000567943 IGHA2P01877 340 aa29.83■■■□□ 2.37
FANCA-228ENST00000567943 CENPQQ7L2Z9 268 aaPredicted RBP29.83■■■□□ 2.37
FANCA-228ENST00000567943 TRMT44Q8IYL2 757 aaKnown RBP29.83■■■□□ 2.37
FANCA-228ENST00000567943 GMCL1P1Q8NEA9 526 aa29.83■■■□□ 2.37
FANCA-228ENST00000567943 ZNF214Q9UL59 606 aaPredicted RBP29.83■■■□□ 2.37
FANCA-228ENST00000567943 SYNPO2Q9UMS6 1093 aa29.83■■■□□ 2.37
FANCA-228ENST00000567943 IVNS1ABPQ9Y6Y0 642 aa29.83■■■□□ 2.37
FANCA-228ENST00000567943 CEP290O15078 2479 aa29.82■■■□□ 2.36
FANCA-228ENST00000567943 TFRCP02786 760 aaKnown RBP29.81■■■□□ 2.36
FANCA-228ENST00000567943 ADORA2AP29274 412 aa29.81■■■□□ 2.36
FANCA-228ENST00000567943 NCAPG2Q86XI2 1143 aa29.81■■■□□ 2.36
FANCA-228ENST00000567943 SLF1Q9BQI6 1058 aa29.81■■■□□ 2.36
FANCA-228ENST00000567943 MROH8Q9H579 483 aa29.81■■■□□ 2.36
FANCA-228ENST00000567943 LAMA4Q16363 1823 aa29.8■■■□□ 2.36
FANCA-228ENST00000567943 TSPY2A6NKD2 308 aa29.8■■■□□ 2.36
FANCA-228ENST00000567943 STRNO43815 780 aa29.8■■■□□ 2.36
FANCA-228ENST00000567943 COBLO75128 1261 aa29.8■■■□□ 2.36
FANCA-228ENST00000567943 CCND3P30281 292 aaPredicted RBP29.8■■■□□ 2.36
FANCA-228ENST00000567943 NOVP48745 357 aa29.8■■■□□ 2.36
FANCA-228ENST00000567943 HAND2P61296 217 aa29.8■■■□□ 2.36
FANCA-228ENST00000567943 RIOX2Q8IUF8 465 aa29.8■■■□□ 2.36
FANCA-228ENST00000567943 RANBP6O60518 1105 aaKnown RBP29.79■■■□□ 2.36
FANCA-228ENST00000567943 FARP2O94887 1054 aaPredicted RBP29.79■■■□□ 2.36
FANCA-228ENST00000567943 IL25Q9H293 177 aa29.79■■■□□ 2.36
FANCA-228ENST00000567943 FRMPD3Q5JV73 1810 aa29.78■■■□□ 2.36
FANCA-228ENST00000567943 STAT3P40763 770 aa29.78■■■□□ 2.36
FANCA-228ENST00000567943 MNX1P50219 401 aaPredicted RBP29.78■■■□□ 2.36
FANCA-228ENST00000567943 SLFN13Q68D06 897 aa29.78■■■□□ 2.36
FANCA-228ENST00000567943 TBC1D10CQ8IV04 446 aa29.77■■■□□ 2.36
FANCA-228ENST00000567943 ABRAQ8N0Z2 381 aa29.77■■■□□ 2.36
FANCA-228ENST00000567943 PRPF38AQ8NAV1 312 aaKnown RBP29.77■■■□□ 2.36
FANCA-228ENST00000567943 TOMM22Q9NS69 142 aa29.77■■■□□ 2.36
FANCA-228ENST00000567943 PLXNA1Q9UIW2 1896 aa29.76■■■□□ 2.36
FANCA-228ENST00000567943 SLC25A27O95847 323 aa29.76■■■□□ 2.35
FANCA-228ENST00000567943 NEFLP07196 543 aa29.76■■■□□ 2.35
FANCA-228ENST00000567943 CYP2C19P33261 490 aa29.76■■■□□ 2.35
FANCA-228ENST00000567943 RASGRP2Q7LDG7 609 aa29.76■■■□□ 2.35
FANCA-228ENST00000567943 DPP9Q86TI2 863 aa29.76■■■□□ 2.35
FANCA-228ENST00000567943 DIS3LQ8TF46 1054 aaKnown RBP29.76■■■□□ 2.35
FANCA-228ENST00000567943 STX8Q9UNK0 236 aa29.76■■■□□ 2.35
FANCA-228ENST00000567943 RIPK3Q9Y572 518 aa29.76■■■□□ 2.35
FANCA-228ENST00000567943 ALPK3Q96L96 1907 aa29.76■■■□□ 2.35
FANCA-228ENST00000567943 DNAH12Q6ZR08 3092 aa29.75■■■□□ 2.35
FANCA-228ENST00000567943 CAPN2P17655 700 aa29.75■■■□□ 2.35
FANCA-228ENST00000567943 LHX8Q68G74 356 aa29.75■■■□□ 2.35
FANCA-228ENST00000567943 FEM1BQ9UK73 627 aa29.75■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms