RNA–Protein interactions for RNA: ENST00000567806.1

GTF3C1-207, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 4

Gene GTF3C1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-207ENST00000567806 PRAMEF19Q5SWL8 479 aa22.55■■□□□ 1.2
GTF3C1-207ENST00000567806 ANO1Q5XXA6 986 aa22.55■■□□□ 1.2
GTF3C1-207ENST00000567806 MMP19Q99542 508 aa22.55■■□□□ 1.2
GTF3C1-207ENST00000567806 ADAMTS5Q9UNA0 930 aa22.55■■□□□ 1.2
GTF3C1-207ENST00000567806 MINDY4BA8MYZ0 360 aa22.54■■□□□ 1.2
GTF3C1-207ENST00000567806 SBK1Q52WX2 424 aa22.54■■□□□ 1.2
GTF3C1-207ENST00000567806 GIMAP6Q6P9H5 292 aa22.54■■□□□ 1.2
GTF3C1-207ENST00000567806 DEFB123Q8N688 67 aa22.54■■□□□ 1.2
GTF3C1-207ENST00000567806 KBTBD3Q8NAB2 608 aa22.54■■□□□ 1.2
GTF3C1-207ENST00000567806 SLC17A8Q8NDX2 589 aa22.54■■□□□ 1.2
GTF3C1-207ENST00000567806 MAML3Q96JK9 1138 aa22.54■■□□□ 1.2
GTF3C1-207ENST00000567806 FBXO28Q9NVF7 368 aa22.54■■□□□ 1.2
GTF3C1-207ENST00000567806 BAZ2AQ9UIF9 1905 aaKnown RBP22.53■■□□□ 1.2
GTF3C1-207ENST00000567806 STAT3P40763 770 aa22.53■■□□□ 1.2
GTF3C1-207ENST00000567806 RTP1P59025 263 aa22.53■■□□□ 1.2
GTF3C1-207ENST00000567806 KCTD2Q14681 263 aa22.53■■□□□ 1.2
GTF3C1-207ENST00000567806 FAM83BQ5T0W9 1011 aa22.53■■□□□ 1.2
GTF3C1-207ENST00000567806 RIOX2Q8IUF8 465 aa22.53■■□□□ 1.2
GTF3C1-207ENST00000567806 STK11IPQ8N1F8 1099 aa22.53■■□□□ 1.2
GTF3C1-207ENST00000567806 DCTPP1Q9H773 170 aa22.53■■□□□ 1.2
GTF3C1-207ENST00000567806 PPP1R9AQ9ULJ8 1098 aa22.53■■□□□ 1.2
GTF3C1-207ENST00000567806 GSG1L2A8MUP6 293 aa22.52■■□□□ 1.2
GTF3C1-207ENST00000567806 VWA5AO00534 786 aa22.52■■□□□ 1.2
GTF3C1-207ENST00000567806 RNF113AO15541 343 aaKnown RBP22.52■■□□□ 1.2
GTF3C1-207ENST00000567806 COPB2P35606 906 aa22.52■■□□□ 1.2
GTF3C1-207ENST00000567806 APPBP2Q92624 585 aa22.52■■□□□ 1.2
GTF3C1-207ENST00000567806 ATP11BQ9Y2G3 1177 aa22.52■■□□□ 1.2
GTF3C1-207ENST00000567806 ZFYP08048 801 aaPredicted RBP22.51■■□□□ 1.19
GTF3C1-207ENST00000567806 SLC39A5Q6ZMH5 540 aa22.51■■□□□ 1.19
GTF3C1-207ENST00000567806 OSBP2Q969R2 916 aa22.51■■□□□ 1.19
GTF3C1-207ENST00000567806 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.51■■□□□ 1.19
GTF3C1-207ENST00000567806 MYH8P13535 1937 aa22.51■■□□□ 1.19
GTF3C1-207ENST00000567806 RLFQ13129 1914 aa22.51■■□□□ 1.19
GTF3C1-207ENST00000567806 APPP05067 770 aa22.5■■□□□ 1.19
GTF3C1-207ENST00000567806 PGK2P07205 417 aa22.5■■□□□ 1.19
GTF3C1-207ENST00000567806 GNAT2P19087 354 aa22.5■■□□□ 1.19
GTF3C1-207ENST00000567806 RASA1P20936 1047 aa22.5■■□□□ 1.19
GTF3C1-207ENST00000567806 LRRFIP1Q32MZ4 808 aaKnown RBP22.5■■□□□ 1.19
GTF3C1-207ENST00000567806 ZNF444Q8N0Y2 327 aaPredicted RBP22.5■■□□□ 1.19
GTF3C1-207ENST00000567806 ZNF287Q9HBT7 754 aa22.5■■□□□ 1.19
GTF3C1-207ENST00000567806 NYAP2Q9P242 653 aa22.5■■□□□ 1.19
GTF3C1-207ENST00000567806 NRBP1Q9UHY1 535 aa22.5■■□□□ 1.19
GTF3C1-207ENST00000567806 DIS3Q9Y2L1 958 aaKnown RBP22.5■■□□□ 1.19
GTF3C1-207ENST00000567806 ZNF236Q9UL36 1845 aa22.5■■□□□ 1.19
GTF3C1-207ENST00000567806 LAMA3Q16787 3333 aa22.49■■□□□ 1.19
GTF3C1-207ENST00000567806 F5H6K3 240 aa22.49■■□□□ 1.19
GTF3C1-207ENST00000567806 ADCYAP1R1P41586 468 aa22.49■■□□□ 1.19
GTF3C1-207ENST00000567806 KLRC3Q07444 240 aa22.49■■□□□ 1.19
GTF3C1-207ENST00000567806 LRRC41Q15345 812 aa22.49■■□□□ 1.19
GTF3C1-207ENST00000567806 Q7L0L9 218 aa22.49■■□□□ 1.19
GTF3C1-207ENST00000567806 SLF1Q9BQI6 1058 aa22.49■■□□□ 1.19
GTF3C1-207ENST00000567806 TINF2Q9BSI4 451 aa22.49■■□□□ 1.19
GTF3C1-207ENST00000567806 A0A0G2JMZ2 1700 aa22.48■■□□□ 1.19
GTF3C1-207ENST00000567806 RARBP10826 455 aa22.48■■□□□ 1.19
GTF3C1-207ENST00000567806 TDO2P48775 406 aa22.48■■□□□ 1.19
GTF3C1-207ENST00000567806 TSHZ3Q63HK5 1081 aa22.48■■□□□ 1.19
GTF3C1-207ENST00000567806 YTHDC1Q96MU7 727 aaKnown RBP22.48■■□□□ 1.19
GTF3C1-207ENST00000567806 NUP88Q99567 741 aaPredicted RBP22.48■■□□□ 1.19
GTF3C1-207ENST00000567806 CLIP2Q9UDT6 1046 aa22.48■■□□□ 1.19
GTF3C1-207ENST00000567806 ZNF214Q9UL59 606 aaPredicted RBP22.48■■□□□ 1.19
GTF3C1-207ENST00000567806 CTDP1Q9Y5B0 961 aaPredicted RBP22.48■■□□□ 1.19
GTF3C1-207ENST00000567806 DNAH12Q6ZR08 3092 aa22.47■■□□□ 1.19
GTF3C1-207ENST00000567806 GPAA1O43292 621 aa22.47■■□□□ 1.19
GTF3C1-207ENST00000567806 ZNF792Q3KQV3 632 aa22.47■■□□□ 1.19
GTF3C1-207ENST00000567806 PRPF38AQ8NAV1 312 aaKnown RBP22.47■■□□□ 1.19
GTF3C1-207ENST00000567806 REPS2Q8NFH8 660 aa22.47■■□□□ 1.19
GTF3C1-207ENST00000567806 FERMT2Q96AC1 680 aa22.47■■□□□ 1.19
GTF3C1-207ENST00000567806 XPNPEP3Q9NQH7 507 aa22.47■■□□□ 1.19
GTF3C1-207ENST00000567806 FRMPD3Q5JV73 1810 aa22.47■■□□□ 1.19
GTF3C1-207ENST00000567806 PATL2C9JE40 543 aaKnown RBP22.46■■□□□ 1.19
GTF3C1-207ENST00000567806 ZBED4O75132 1171 aa22.46■■□□□ 1.19
GTF3C1-207ENST00000567806 NDUFB10O96000 172 aa22.46■■□□□ 1.19
GTF3C1-207ENST00000567806 FAM47AQ5JRC9 791 aa22.46■■□□□ 1.19
GTF3C1-207ENST00000567806 DDX11Q96FC9 970 aa22.46■■□□□ 1.19
GTF3C1-207ENST00000567806 TEX13BQ9BXU2 312 aa22.46■■□□□ 1.19
GTF3C1-207ENST00000567806 PRDM5Q9NQX1 630 aaPredicted RBP22.46■■□□□ 1.19
GTF3C1-207ENST00000567806 MTMR10Q9NXD2 777 aa22.46■■□□□ 1.19
GTF3C1-207ENST00000567806 MYH7P12883 1935 aa22.46■■□□□ 1.19
GTF3C1-207ENST00000567806 SLC4A3P48751 1232 aa22.45■■□□□ 1.18
GTF3C1-207ENST00000567806 TRIM60Q495X7 471 aa22.45■■□□□ 1.18
GTF3C1-207ENST00000567806 SNRNP48Q6IEG0 339 aaKnown RBP22.45■■□□□ 1.18
GTF3C1-207ENST00000567806 RNF180Q86T96 592 aa22.45■■□□□ 1.18
GTF3C1-207ENST00000567806 NACAP1Q9BZK3 213 aa22.45■■□□□ 1.18
GTF3C1-207ENST00000567806 CNPY2Q9Y2B0 182 aa22.45■■□□□ 1.18
GTF3C1-207ENST00000567806 M0R2C6 588 aa22.44■■□□□ 1.18
GTF3C1-207ENST00000567806 ERC2O15083 957 aa22.44■■□□□ 1.18
GTF3C1-207ENST00000567806 PRDM1O75626 825 aa22.44■■□□□ 1.18
GTF3C1-207ENST00000567806 IFNL3Q8IZI9 196 aa22.44■■□□□ 1.18
GTF3C1-207ENST00000567806 STXBP5LQ9Y2K9 1186 aa22.44■■□□□ 1.18
GTF3C1-207ENST00000567806 ROBO3Q96MS0 1386 aa22.43■■□□□ 1.18
GTF3C1-207ENST00000567806 TTC41PQ6P2S7 1318 aa22.43■■□□□ 1.18
GTF3C1-207ENST00000567806 AKR1A1P14550 325 aa22.43■■□□□ 1.18
GTF3C1-207ENST00000567806 TAL1P17542 331 aaPredicted RBP22.43■■□□□ 1.18
GTF3C1-207ENST00000567806 SNX17Q15036 470 aa22.43■■□□□ 1.18
GTF3C1-207ENST00000567806 CPXCR1Q8N123 301 aa22.43■■□□□ 1.18
GTF3C1-207ENST00000567806 MKL1Q969V6 931 aa22.43■■□□□ 1.18
GTF3C1-207ENST00000567806 KIFC2Q96AC6 838 aa22.43■■□□□ 1.18
GTF3C1-207ENST00000567806 EPB41L4AQ9HCS5 686 aaPredicted RBP22.43■■□□□ 1.18
GTF3C1-207ENST00000567806 PHF24Q9UPV7 400 aa22.43■■□□□ 1.18
GTF3C1-207ENST00000567806 IGKV6D-41A0A0C4DH26 115 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms