RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 SMIM22K7EJ46 135 aa5.72□□□□□ -1.49
CLK3-219ENST00000567805 M0R2C6 588 aa5.72□□□□□ -1.49
CLK3-219ENST00000567805 WDR46O15213 610 aaKnown RBP5.72□□□□□ -1.49
CLK3-219ENST00000567805 PEX10O60683 326 aa5.72□□□□□ -1.49
CLK3-219ENST00000567805 CNMDO75829 334 aa5.72□□□□□ -1.49
CLK3-219ENST00000567805 SGPL1O95470 568 aa5.72□□□□□ -1.49
CLK3-219ENST00000567805 APPP05067 770 aa5.72□□□□□ -1.49
CLK3-219ENST00000567805 CYP2B6P20813 491 aa5.72□□□□□ -1.49
CLK3-219ENST00000567805 RGS2P41220 211 aa5.72□□□□□ -1.49
CLK3-219ENST00000567805 TDO2P48775 406 aa5.72□□□□□ -1.49
CLK3-219ENST00000567805 EMP3P54852 163 aa5.72□□□□□ -1.49
CLK3-219ENST00000567805 COG2Q14746 738 aa5.72□□□□□ -1.49
CLK3-219ENST00000567805 ZMYM1Q5SVZ6 1142 aa5.72□□□□□ -1.49
CLK3-219ENST00000567805 MORN1Q5T089 497 aa5.72□□□□□ -1.49
CLK3-219ENST00000567805 POTEEQ6S8J3 1075 aa5.72□□□□□ -1.49
CLK3-219ENST00000567805 GPR142Q7Z601 462 aa5.72□□□□□ -1.49
CLK3-219ENST00000567805 PLEKHH3Q7Z736 793 aa5.72□□□□□ -1.49
CLK3-219ENST00000567805 UBE2Q1Q7Z7E8 422 aa5.72□□□□□ -1.49
CLK3-219ENST00000567805 TICAM2Q86XR7 235 aa5.72□□□□□ -1.49
CLK3-219ENST00000567805 SIAH1Q8IUQ4 282 aa5.72□□□□□ -1.49
CLK3-219ENST00000567805 MB21D1Q8N884 522 aa5.72□□□□□ -1.49
CLK3-219ENST00000567805 U2AF1L4Q8WU68 220 aaKnown RBP5.72□□□□□ -1.49
CLK3-219ENST00000567805 USP6NLQ92738 828 aa5.72□□□□□ -1.49
CLK3-219ENST00000567805 EVI5LQ96CN4 794 aa5.72□□□□□ -1.49
CLK3-219ENST00000567805 HS3ST6Q96QI5 342 aa5.72□□□□□ -1.49
CLK3-219ENST00000567805 NACAP1Q9BZK3 213 aa5.72□□□□□ -1.49
CLK3-219ENST00000567805 TANGO6Q9C0B7 1094 aa5.72□□□□□ -1.49
CLK3-219ENST00000567805 PORCNQ9H237 461 aa5.72□□□□□ -1.49
CLK3-219ENST00000567805 RWDD1Q9H446 243 aaPredicted RBP5.72□□□□□ -1.49
CLK3-219ENST00000567805 VCPKMTQ9H867 229 aa5.72□□□□□ -1.49
CLK3-219ENST00000567805 MKNK2Q9HBH9 465 aa5.72□□□□□ -1.49
CLK3-219ENST00000567805 ZNF287Q9HBT7 754 aa5.72□□□□□ -1.49
CLK3-219ENST00000567805 CWC22Q9HCG8 908 aaKnown RBP5.72□□□□□ -1.49
CLK3-219ENST00000567805 EPB41L4AQ9HCS5 686 aaPredicted RBP5.72□□□□□ -1.49
CLK3-219ENST00000567805 GOPCQ9HD26 462 aa5.72□□□□□ -1.49
CLK3-219ENST00000567805 HOXC10Q9NYD6 342 aa5.72□□□□□ -1.49
CLK3-219ENST00000567805 STAP2Q9UGK3 403 aa5.72□□□□□ -1.49
CLK3-219ENST00000567805 RPTORQ8N122 1335 aa5.72□□□□□ -1.49
CLK3-219ENST00000567805 LAMA4Q16363 1823 aa5.71□□□□□ -1.49
CLK3-219ENST00000567805 SLC15A5A6NIM6 579 aa5.71□□□□□ -1.5
CLK3-219ENST00000567805 FLOT1O75955 427 aa5.71□□□□□ -1.5
CLK3-219ENST00000567805 FARP2O94887 1054 aaPredicted RBP5.71□□□□□ -1.5
CLK3-219ENST00000567805 TFRCP02786 760 aaKnown RBP5.71□□□□□ -1.5
CLK3-219ENST00000567805 SLC3A2P08195 630 aaKnown RBP5.71□□□□□ -1.5
CLK3-219ENST00000567805 EEF2P13639 858 aaKnown RBP5.71□□□□□ -1.5
CLK3-219ENST00000567805 ZKSCAN1P17029 563 aaPredicted RBP5.71□□□□□ -1.5
CLK3-219ENST00000567805 RASA1P20936 1047 aa5.71□□□□□ -1.5
CLK3-219ENST00000567805 PDE1AP54750 535 aa5.71□□□□□ -1.5
CLK3-219ENST00000567805 ATP2B2Q01814 1243 aa5.71□□□□□ -1.5
CLK3-219ENST00000567805 PDE4BQ07343 736 aa5.71□□□□□ -1.5
CLK3-219ENST00000567805 MAP2K5Q13163 448 aa5.71□□□□□ -1.5
CLK3-219ENST00000567805 GRB14Q14449 540 aa5.71□□□□□ -1.5
CLK3-219ENST00000567805 KIAA1755Q5JYT7 1200 aa5.71□□□□□ -1.5
CLK3-219ENST00000567805 MAP3K21Q5TCX8 1036 aa5.71□□□□□ -1.5
CLK3-219ENST00000567805 WDR78Q5VTH9 848 aa5.71□□□□□ -1.5
CLK3-219ENST00000567805 CLEC10AQ8IUN9 316 aa5.71□□□□□ -1.5
CLK3-219ENST00000567805 SMC5Q8IY18 1101 aa5.71□□□□□ -1.5
CLK3-219ENST00000567805 IFNL3Q8IZI9 196 aa5.71□□□□□ -1.5
CLK3-219ENST00000567805 SPICE1Q8N0Z3 855 aa5.71□□□□□ -1.5
CLK3-219ENST00000567805 ANKLE1Q8NAG6 615 aa5.71□□□□□ -1.5
CLK3-219ENST00000567805 TRIB2Q92519 343 aa5.71□□□□□ -1.5
CLK3-219ENST00000567805 DEFB118Q96PH6 123 aa5.71□□□□□ -1.5
CLK3-219ENST00000567805 SEC62Q99442 399 aaKnown RBP5.71□□□□□ -1.5
CLK3-219ENST00000567805 APBA2Q99767 749 aa5.71□□□□□ -1.5
CLK3-219ENST00000567805 HTATIP2Q9BUP3 242 aa5.71□□□□□ -1.5
CLK3-219ENST00000567805 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.71□□□□□ -1.5
CLK3-219ENST00000567805 SPATC1LQ9H0A9 340 aa5.71□□□□□ -1.5
CLK3-219ENST00000567805 CRISPLD2Q9H0B8 497 aa5.71□□□□□ -1.5
CLK3-219ENST00000567805 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.71□□□□□ -1.5
CLK3-219ENST00000567805 NAPBQ9H115 298 aa5.71□□□□□ -1.5
CLK3-219ENST00000567805 HMX1Q9NP08 348 aaPredicted RBP5.71□□□□□ -1.5
CLK3-219ENST00000567805 BTBD7Q9P203 1132 aa5.71□□□□□ -1.5
CLK3-219ENST00000567805 NYAP2Q9P242 653 aa5.71□□□□□ -1.5
CLK3-219ENST00000567805 IVNS1ABPQ9Y6Y0 642 aa5.71□□□□□ -1.5
CLK3-219ENST00000567805 PLIN4Q96Q06 1357 aa5.7□□□□□ -1.5
CLK3-219ENST00000567805 RANBP2P49792 3224 aaKnown RBP5.7□□□□□ -1.5
CLK3-219ENST00000567805 IGKV6D-41A0A0C4DH26 115 aa5.7□□□□□ -1.5
CLK3-219ENST00000567805 FAM205CA6NFA0 338 aa5.7□□□□□ -1.5
CLK3-219ENST00000567805 STRNO43815 780 aa5.7□□□□□ -1.5
CLK3-219ENST00000567805 HOXC6P09630 235 aa5.7□□□□□ -1.5
CLK3-219ENST00000567805 PTPREP23469 700 aa5.7□□□□□ -1.5
CLK3-219ENST00000567805 TRIM32Q13049 653 aa5.7□□□□□ -1.5
CLK3-219ENST00000567805 ZNF444Q8N0Y2 327 aaPredicted RBP5.7□□□□□ -1.5
CLK3-219ENST00000567805 STK11IPQ8N1F8 1099 aa5.7□□□□□ -1.5
CLK3-219ENST00000567805 SHCBP1Q8NEM2 672 aa5.7□□□□□ -1.5
CLK3-219ENST00000567805 MOV10L1Q9BXT6 1211 aaKnown RBP5.7□□□□□ -1.5
CLK3-219ENST00000567805 LNPKQ9C0E8 428 aa5.7□□□□□ -1.5
CLK3-219ENST00000567805 MROH8Q9H579 483 aa5.7□□□□□ -1.5
CLK3-219ENST00000567805 HELLSQ9NRZ9 838 aa5.7□□□□□ -1.5
CLK3-219ENST00000567805 SYNPO2Q9UMS6 1093 aa5.7□□□□□ -1.5
CLK3-219ENST00000567805 ADAMTS5Q9UNA0 930 aa5.7□□□□□ -1.5
CLK3-219ENST00000567805 LAMA2P24043 3122 aaKnown RBP5.7□□□□□ -1.5
CLK3-219ENST00000567805 SZT2Q5T011 3432 aa5.69□□□□□ -1.5
CLK3-219ENST00000567805 TRIM6-TRIM34B2RNG4 842 aa5.69□□□□□ -1.5
CLK3-219ENST00000567805 F5H6K3 240 aa5.69□□□□□ -1.5
CLK3-219ENST00000567805 FOXP2O15409 715 aa5.69□□□□□ -1.5
CLK3-219ENST00000567805 PRDM1O75626 825 aa5.69□□□□□ -1.5
CLK3-219ENST00000567805 SLC25A27O95847 323 aa5.69□□□□□ -1.5
CLK3-219ENST00000567805 TTLL1O95922 423 aa5.69□□□□□ -1.5
CLK3-219ENST00000567805 NDUFB10O96000 172 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms