RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 CCDC197Q8NCU1 140 aa13.72□□□□□ -0.21
CSPG4P13-202ENST00000567704 SREK1Q8WXA9 508 aaKnown RBP13.72□□□□□ -0.21
CSPG4P13-202ENST00000567704 YTHDC2Q9H6S0 1430 aaKnown RBP13.72□□□□□ -0.21
CSPG4P13-202ENST00000567704 HEXIM1O94992 359 aaKnown RBP13.72□□□□□ -0.21
CSPG4P13-202ENST00000567704 HIBCHQ6NVY1 386 aaPredicted RBP13.72□□□□□ -0.21
CSPG4P13-202ENST00000567704 USP37Q86T82 979 aa13.72□□□□□ -0.21
CSPG4P13-202ENST00000567704 ZNF710Q8N1W2 664 aa13.72□□□□□ -0.21
CSPG4P13-202ENST00000567704 VCX3BQ9H321 246 aa13.72□□□□□ -0.21
CSPG4P13-202ENST00000567704 TMOD2Q9NZR1 351 aa13.72□□□□□ -0.21
CSPG4P13-202ENST00000567704 MAST1Q9Y2H9 1570 aa13.72□□□□□ -0.21
CSPG4P13-202ENST00000567704 FGAP02671 866 aa13.71□□□□□ -0.21
CSPG4P13-202ENST00000567704 CXCR5P32302 372 aa13.71□□□□□ -0.21
CSPG4P13-202ENST00000567704 AKNAD1Q5T1N1 836 aa13.71□□□□□ -0.21
CSPG4P13-202ENST00000567704 CABP7Q86V35 215 aa13.71□□□□□ -0.21
CSPG4P13-202ENST00000567704 SYCE1Q8N0S2 351 aa13.71□□□□□ -0.21
CSPG4P13-202ENST00000567704 TLR7Q9NYK1 1049 aaKnown RBP13.71□□□□□ -0.21
CSPG4P13-202ENST00000567704 LRWD1Q9UFC0 647 aa13.71□□□□□ -0.21
CSPG4P13-202ENST00000567704 ZNF790Q6PG37 636 aa13.71□□□□□ -0.21
CSPG4P13-202ENST00000567704 ZNF532Q9HCE3 1301 aa13.71□□□□□ -0.21
CSPG4P13-202ENST00000567704 GCC2Q8IWJ2 1684 aa13.71□□□□□ -0.21
CSPG4P13-202ENST00000567704 LOC102724159A0A0B4J2E5 919 aa13.71□□□□□ -0.21
CSPG4P13-202ENST00000567704 LRRD1A4D1F6 860 aa13.71□□□□□ -0.21
CSPG4P13-202ENST00000567704 C6orf229H3BNL8 230 aa13.71□□□□□ -0.21
CSPG4P13-202ENST00000567704 SMIM24O75264 130 aa13.71□□□□□ -0.21
CSPG4P13-202ENST00000567704 RASSF2P50749 326 aa13.71□□□□□ -0.21
CSPG4P13-202ENST00000567704 PDCLQ13371 301 aa13.71□□□□□ -0.21
CSPG4P13-202ENST00000567704 PWP2Q15269 919 aaKnown RBP13.71□□□□□ -0.21
CSPG4P13-202ENST00000567704 ADAT2Q7Z6V5 191 aaKnown RBP13.71□□□□□ -0.21
CSPG4P13-202ENST00000567704 KSR1Q8IVT5 923 aa13.71□□□□□ -0.21
CSPG4P13-202ENST00000567704 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.71□□□□□ -0.21
CSPG4P13-202ENST00000567704 ANKRD20A3Q5VUR7 823 aa13.71□□□□□ -0.22
CSPG4P13-202ENST00000567704 TOGARAM2Q6ZUX3 1019 aa13.71□□□□□ -0.22
CSPG4P13-202ENST00000567704 NUCKS1Q9H1E3 243 aaKnown RBP13.71□□□□□ -0.22
CSPG4P13-202ENST00000567704 MAN1B1Q9UKM7 699 aa13.71□□□□□ -0.22
CSPG4P13-202ENST00000567704 GUCY2CP25092 1073 aa13.7□□□□□ -0.22
CSPG4P13-202ENST00000567704 MRPS25P82663 173 aaKnown RBP13.7□□□□□ -0.22
CSPG4P13-202ENST00000567704 NECTIN1Q15223 517 aa13.7□□□□□ -0.22
CSPG4P13-202ENST00000567704 PLBD2Q8NHP8 589 aa13.7□□□□□ -0.22
CSPG4P13-202ENST00000567704 AMFRQ9UKV5 643 aa13.7□□□□□ -0.22
CSPG4P13-202ENST00000567704 ZMYM6O95789 1325 aa13.7□□□□□ -0.22
CSPG4P13-202ENST00000567704 PPP6R2O75170 966 aa13.7□□□□□ -0.22
CSPG4P13-202ENST00000567704 RASSF7Q02833 373 aa13.7□□□□□ -0.22
CSPG4P13-202ENST00000567704 INF2Q27J81 1249 aa13.7□□□□□ -0.22
CSPG4P13-202ENST00000567704 EDC4Q6P2E9 1401 aaKnown RBP13.7□□□□□ -0.22
CSPG4P13-202ENST00000567704 ARHGAP24Q8N264 748 aa13.7□□□□□ -0.22
CSPG4P13-202ENST00000567704 CCDC110Q8TBZ0 833 aa13.7□□□□□ -0.22
CSPG4P13-202ENST00000567704 ENOX1Q8TC92 643 aaKnown RBP13.7□□□□□ -0.22
CSPG4P13-202ENST00000567704 SNX29Q8TEQ0 813 aa13.7□□□□□ -0.22
CSPG4P13-202ENST00000567704 SYMPKQ92797 1274 aaKnown RBP13.7□□□□□ -0.22
CSPG4P13-202ENST00000567704 IQCDQ96DY2 449 aa13.7□□□□□ -0.22
CSPG4P13-202ENST00000567704 OSBPL5Q9H0X9 879 aaPredicted RBP13.7□□□□□ -0.22
CSPG4P13-202ENST00000567704 SLC7A5Q01650 507 aa13.7□□□□□ -0.22
CSPG4P13-202ENST00000567704 SEPT14Q6ZU15 432 aa13.7□□□□□ -0.22
CSPG4P13-202ENST00000567704 SRLQ86TD4 932 aa13.7□□□□□ -0.22
CSPG4P13-202ENST00000567704 ZNF654Q8IZM8 581 aa13.7□□□□□ -0.22
CSPG4P13-202ENST00000567704 RAB3IPQ96QF0 476 aaPredicted RBP13.7□□□□□ -0.22
CSPG4P13-202ENST00000567704 HAUS7Q99871 368 aa13.7□□□□□ -0.22
CSPG4P13-202ENST00000567704 LSM14BQ9BX40 385 aaKnown RBP13.7□□□□□ -0.22
CSPG4P13-202ENST00000567704 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.7□□□□□ -0.22
CSPG4P13-202ENST00000567704 KCNQ3O43525 872 aa13.7□□□□□ -0.22
CSPG4P13-202ENST00000567704 GTPBP6O43824 516 aaPredicted RBP13.7□□□□□ -0.22
CSPG4P13-202ENST00000567704 RASIP1Q5U651 963 aa13.7□□□□□ -0.22
CSPG4P13-202ENST00000567704 CSRNP2Q9H175 543 aa13.7□□□□□ -0.22
CSPG4P13-202ENST00000567704 CHUKO15111 745 aa13.69□□□□□ -0.22
CSPG4P13-202ENST00000567704 ST5P78524 1137 aa13.69□□□□□ -0.22
CSPG4P13-202ENST00000567704 KIF23Q02241 960 aaPredicted RBP13.69□□□□□ -0.22
CSPG4P13-202ENST00000567704 NAA35Q5VZE5 725 aa13.69□□□□□ -0.22
CSPG4P13-202ENST00000567704 INTS9Q9NV88 658 aaKnown RBP13.69□□□□□ -0.22
CSPG4P13-202ENST00000567704 JAG2Q9Y219 1238 aa13.69□□□□□ -0.22
CSPG4P13-202ENST00000567704 FRMD4BQ9Y2L6 1034 aa13.69□□□□□ -0.22
CSPG4P13-202ENST00000567704 B4DLN1 442 aa13.69□□□□□ -0.22
CSPG4P13-202ENST00000567704 TMEM232C9JQI7 657 aa13.69□□□□□ -0.22
CSPG4P13-202ENST00000567704 LUC7L3O95232 432 aaKnown RBP13.69□□□□□ -0.22
CSPG4P13-202ENST00000567704 RPN1P04843 607 aaKnown RBP13.69□□□□□ -0.22
CSPG4P13-202ENST00000567704 GSTO1P78417 241 aa13.69□□□□□ -0.22
CSPG4P13-202ENST00000567704 IL17REQ8NFR9 667 aa13.69□□□□□ -0.22
CSPG4P13-202ENST00000567704 GSDMAQ96QA5 445 aa13.69□□□□□ -0.22
CSPG4P13-202ENST00000567704 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.69□□□□□ -0.22
CSPG4P13-202ENST00000567704 HLA-DOAP06340 250 aa13.69□□□□□ -0.22
CSPG4P13-202ENST00000567704 NR1D1P20393 614 aa13.69□□□□□ -0.22
CSPG4P13-202ENST00000567704 ABCB4P21439 1286 aa13.69□□□□□ -0.22
CSPG4P13-202ENST00000567704 PPP2R5BQ15173 497 aa13.69□□□□□ -0.22
CSPG4P13-202ENST00000567704 U2AF1L4Q8WU68 220 aaKnown RBP13.69□□□□□ -0.22
CSPG4P13-202ENST00000567704 SLC24A3Q9HC58 644 aa13.69□□□□□ -0.22
CSPG4P13-202ENST00000567704 ITGA6P23229 1130 aa13.69□□□□□ -0.22
CSPG4P13-202ENST00000567704 HSPA1LP34931 641 aa13.69□□□□□ -0.22
CSPG4P13-202ENST00000567704 PSMC4P43686 418 aa13.69□□□□□ -0.22
CSPG4P13-202ENST00000567704 CFAP157Q5JU67 520 aa13.69□□□□□ -0.22
CSPG4P13-202ENST00000567704 UIMC1Q96RL1 719 aa13.69□□□□□ -0.22
CSPG4P13-202ENST00000567704 TUBGCP2Q9BSJ2 902 aa13.69□□□□□ -0.22
CSPG4P13-202ENST00000567704 HDAC9Q9UKV0 1011 aa13.69□□□□□ -0.22
CSPG4P13-202ENST00000567704 SPDYE3A6NKU9 549 aa13.68□□□□□ -0.22
CSPG4P13-202ENST00000567704 NEURL1BA8MQ27 555 aa13.68□□□□□ -0.22
CSPG4P13-202ENST00000567704 CTNND1O60716 968 aaKnown RBP13.68□□□□□ -0.22
CSPG4P13-202ENST00000567704 ZNF853P0CG23 659 aa13.68□□□□□ -0.22
CSPG4P13-202ENST00000567704 PHLDB2Q86SQ0 1253 aa13.68□□□□□ -0.22
CSPG4P13-202ENST00000567704 ZCRB1Q8TBF4 217 aaKnown RBP13.68□□□□□ -0.22
CSPG4P13-202ENST00000567704 TRIM4Q9C037 500 aa13.68□□□□□ -0.22
CSPG4P13-202ENST00000567704 FAM184BQ9ULE4 1060 aa13.68□□□□□ -0.22
CSPG4P13-202ENST00000567704 CCDC169A6NNP5 214 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms