RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 GPR25O00155 361 aa14.27□□□□□ -0.13
SF3B3-208ENST00000567250 PRC1O43663 620 aa14.27□□□□□ -0.13
SF3B3-208ENST00000567250 FLOT1O75955 427 aa14.27□□□□□ -0.13
SF3B3-208ENST00000567250 HERVK_113P62684 666 aa14.27□□□□□ -0.13
SF3B3-208ENST00000567250 FAM110CQ1W6H9 321 aa14.27□□□□□ -0.13
SF3B3-208ENST00000567250 FAM83BQ5T0W9 1011 aa14.27□□□□□ -0.13
SF3B3-208ENST00000567250 RCSD1Q6JBY9 416 aa14.27□□□□□ -0.13
SF3B3-208ENST00000567250 LBX2Q6XYB7 198 aa14.27□□□□□ -0.13
SF3B3-208ENST00000567250 PNMA1Q8ND90 353 aa14.27□□□□□ -0.13
SF3B3-208ENST00000567250 DCAF4Q8WV16 495 aa14.27□□□□□ -0.13
SF3B3-208ENST00000567250 ANKS1AQ92625 1134 aa14.27□□□□□ -0.13
SF3B3-208ENST00000567250 UPF2Q9HAU5 1272 aaKnown RBP14.27□□□□□ -0.13
SF3B3-208ENST00000567250 TSKSQ9UJT2 592 aa14.27□□□□□ -0.13
SF3B3-208ENST00000567250 SNX14Q9Y5W7 946 aa14.27□□□□□ -0.13
SF3B3-208ENST00000567250 BMP3P12645 472 aa14.26□□□□□ -0.13
SF3B3-208ENST00000567250 STAT2P52630 851 aa14.26□□□□□ -0.13
SF3B3-208ENST00000567250 ANAPC15P60006 121 aa14.26□□□□□ -0.13
SF3B3-208ENST00000567250 COG2Q14746 738 aa14.26□□□□□ -0.13
SF3B3-208ENST00000567250 KIF22Q14807 665 aa14.26□□□□□ -0.13
SF3B3-208ENST00000567250 ARHGEF6Q15052 776 aa14.26□□□□□ -0.13
SF3B3-208ENST00000567250 CCDC96Q2M329 555 aa14.26□□□□□ -0.13
SF3B3-208ENST00000567250 TMEM67Q5HYA8 995 aa14.26□□□□□ -0.13
SF3B3-208ENST00000567250 BLOC1S2Q6QNY1 142 aa14.26□□□□□ -0.13
SF3B3-208ENST00000567250 RASEFQ8IZ41 740 aa14.26□□□□□ -0.13
SF3B3-208ENST00000567250 TMTC2Q8N394 836 aa14.26□□□□□ -0.13
SF3B3-208ENST00000567250 ERO1AQ96HE7 468 aa14.26□□□□□ -0.13
SF3B3-208ENST00000567250 JAKMIP1Q96N16 626 aaKnown RBP14.26□□□□□ -0.13
SF3B3-208ENST00000567250 HOXC10Q9NYD6 342 aa14.26□□□□□ -0.13
SF3B3-208ENST00000567250 SPDYE16A6NNV3 312 aaPredicted RBP14.25□□□□□ -0.13
SF3B3-208ENST00000567250 FKTNO75072 461 aa14.25□□□□□ -0.13
SF3B3-208ENST00000567250 ANTXR2P58335 489 aa14.25□□□□□ -0.13
SF3B3-208ENST00000567250 SP3Q02447 781 aa14.25□□□□□ -0.13
SF3B3-208ENST00000567250 IKQ13123 557 aaPredicted RBP14.25□□□□□ -0.13
SF3B3-208ENST00000567250 SEC23AQ15436 765 aa14.25□□□□□ -0.13
SF3B3-208ENST00000567250 KIAA1755Q5JYT7 1200 aa14.25□□□□□ -0.13
SF3B3-208ENST00000567250 GPATCH4Q5T3I0 446 aaKnown RBP14.25□□□□□ -0.13
SF3B3-208ENST00000567250 C17orf99Q6UX52 265 aa14.25□□□□□ -0.13
SF3B3-208ENST00000567250 DHX32Q7L7V1 743 aaKnown RBP14.25□□□□□ -0.13
SF3B3-208ENST00000567250 FAM160B2Q86V87 743 aa14.25□□□□□ -0.13
SF3B3-208ENST00000567250 MB21D1Q8N884 522 aa14.25□□□□□ -0.13
SF3B3-208ENST00000567250 NKX2-3Q8TAU0 364 aa14.25□□□□□ -0.13
SF3B3-208ENST00000567250 SLF1Q9BQI6 1058 aa14.25□□□□□ -0.13
SF3B3-208ENST00000567250 FEM1BQ9UK73 627 aa14.25□□□□□ -0.13
SF3B3-208ENST00000567250 MTMR7Q9Y216 660 aa14.25□□□□□ -0.13
SF3B3-208ENST00000567250 CASP8AP2Q9UKL3 1982 aa14.25□□□□□ -0.13
SF3B3-208ENST00000567250 MYH6P13533 1939 aa14.25□□□□□ -0.13
SF3B3-208ENST00000567250 CCDC69A6NI79 296 aa14.24□□□□□ -0.13
SF3B3-208ENST00000567250 SH2B2O14492 632 aaPredicted RBP14.24□□□□□ -0.13
SF3B3-208ENST00000567250 PLA2G6O60733 806 aa14.24□□□□□ -0.13
SF3B3-208ENST00000567250 FDX1P10109 184 aa14.24□□□□□ -0.13
SF3B3-208ENST00000567250 PDHBP11177 359 aa14.24□□□□□ -0.13
SF3B3-208ENST00000567250 BCRP11274 1271 aa14.24□□□□□ -0.13
SF3B3-208ENST00000567250 CASTP20810 708 aaKnown RBP14.24□□□□□ -0.13
SF3B3-208ENST00000567250 DSG3P32926 999 aa14.24□□□□□ -0.13
SF3B3-208ENST00000567250 LIFRP42702 1097 aa14.24□□□□□ -0.13
SF3B3-208ENST00000567250 LBX1P52954 281 aa14.24□□□□□ -0.13
SF3B3-208ENST00000567250 CCNA1P78396 465 aa14.24□□□□□ -0.13
SF3B3-208ENST00000567250 FGD1P98174 961 aa14.24□□□□□ -0.13
SF3B3-208ENST00000567250 ADCK5Q3MIX3 580 aa14.24□□□□□ -0.13
SF3B3-208ENST00000567250 ASPRV1Q53RT3 343 aa14.24□□□□□ -0.13
SF3B3-208ENST00000567250 CHST3Q7LGC8 479 aa14.24□□□□□ -0.13
SF3B3-208ENST00000567250 PRPF38AQ8NAV1 312 aaKnown RBP14.24□□□□□ -0.13
SF3B3-208ENST00000567250 CHURC1Q8WUH1 139 aa14.24□□□□□ -0.13
SF3B3-208ENST00000567250 ZNF296Q8WUU4 475 aaPredicted RBP14.24□□□□□ -0.13
SF3B3-208ENST00000567250 NUP88Q99567 741 aaPredicted RBP14.24□□□□□ -0.13
SF3B3-208ENST00000567250 P2RX7Q99572 595 aaKnown RBP14.24□□□□□ -0.13
SF3B3-208ENST00000567250 PRDM10Q9NQV6 1147 aa14.24□□□□□ -0.13
SF3B3-208ENST00000567250 MORF4L1Q9UBU8 362 aa14.24□□□□□ -0.13
SF3B3-208ENST00000567250 CPA4Q9UI42 421 aa14.24□□□□□ -0.13
SF3B3-208ENST00000567250 PPP1R9AQ9ULJ8 1098 aa14.24□□□□□ -0.13
SF3B3-208ENST00000567250 RABGAP1Q9Y3P9 1069 aa14.24□□□□□ -0.13
SF3B3-208ENST00000567250 CTDP1Q9Y5B0 961 aaPredicted RBP14.24□□□□□ -0.13
SF3B3-208ENST00000567250 PLXNB2O15031 1838 aa14.24□□□□□ -0.13
SF3B3-208ENST00000567250 RBBP6Q7Z6E9 1792 aaKnown RBP14.24□□□□□ -0.13
SF3B3-208ENST00000567250 TMEM232C9JQI7 657 aa14.23□□□□□ -0.13
SF3B3-208ENST00000567250 DDAH1O94760 285 aa14.23□□□□□ -0.13
SF3B3-208ENST00000567250 SNHG28P0DPA3 235 aa14.23□□□□□ -0.13
SF3B3-208ENST00000567250 NFXL1Q6ZNB6 911 aa14.23□□□□□ -0.13
SF3B3-208ENST00000567250 CATIPQ7Z7H3 387 aa14.23□□□□□ -0.13
SF3B3-208ENST00000567250 ANKRD13CQ8N6S4 541 aa14.23□□□□□ -0.13
SF3B3-208ENST00000567250 IGDCC4Q8TDY8 1250 aa14.23□□□□□ -0.13
SF3B3-208ENST00000567250 PAGR1Q9BTK6 254 aa14.23□□□□□ -0.13
SF3B3-208ENST00000567250 TM6SF1Q9BZW5 370 aa14.23□□□□□ -0.13
SF3B3-208ENST00000567250 ZSWIM8A7E2V4 1837 aa14.22□□□□□ -0.13
SF3B3-208ENST00000567250 ZNF236Q9UL36 1845 aa14.22□□□□□ -0.13
SF3B3-208ENST00000567250 PARP1P09874 1014 aaKnown RBP14.22□□□□□ -0.13
SF3B3-208ENST00000567250 CALM1P0DP23 149 aa14.22□□□□□ -0.13
SF3B3-208ENST00000567250 CALM2P0DP24 149 aa14.22□□□□□ -0.13
SF3B3-208ENST00000567250 CALM3P0DP25 149 aa14.22□□□□□ -0.13
SF3B3-208ENST00000567250 COPB2P35606 906 aa14.22□□□□□ -0.13
SF3B3-208ENST00000567250 ERVK-9P63128 1117 aa14.22□□□□□ -0.13
SF3B3-208ENST00000567250 ERVK-24P63145 666 aa14.22□□□□□ -0.13
SF3B3-208ENST00000567250 LACTBP83111 547 aaPredicted RBP14.22□□□□□ -0.13
SF3B3-208ENST00000567250 ZNF543Q08ER8 600 aa14.22□□□□□ -0.13
SF3B3-208ENST00000567250 SYNE3Q6ZMZ3 975 aa14.22□□□□□ -0.13
SF3B3-208ENST00000567250 KCTD1Q719H9 257 aa14.22□□□□□ -0.13
SF3B3-208ENST00000567250 SGMS1Q86VZ5 419 aa14.22□□□□□ -0.13
SF3B3-208ENST00000567250 CCAR1Q8IX12 1150 aaKnown RBP14.22□□□□□ -0.13
SF3B3-208ENST00000567250 GPRC5AQ8NFJ5 357 aa14.22□□□□□ -0.13
SF3B3-208ENST00000567250 ATG4CQ96DT6 458 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms