RNA–Protein interactions for RNA: ENST00000567109.5

CDH13-209, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDH13, Length 8,042 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-209ENST00000567109 PAGR1Q9BTK6 254 aa6.89□□□□□ -1.31
CDH13-209ENST00000567109 STIM2Q9P246 746 aa6.89□□□□□ -1.31
CDH13-209ENST00000567109 CPSF2Q9P2I0 782 aaKnown RBP6.89□□□□□ -1.31
CDH13-209ENST00000567109 PREX1Q8TCU6 1659 aa6.89□□□□□ -1.31
CDH13-209ENST00000567109 GJB2P29033 226 aa6.89□□□□□ -1.31
CDH13-209ENST00000567109 PABPC4Q13310 644 aaKnown RBP eCLIP6.89□□□□□ -1.31
CDH13-209ENST00000567109 PSMD6Q15008 389 aa6.89□□□□□ -1.31
CDH13-209ENST00000567109 USH1GQ495M9 461 aa6.89□□□□□ -1.31
CDH13-209ENST00000567109 GBP6Q6ZN66 633 aa6.89□□□□□ -1.31
CDH13-209ENST00000567109 RYBPQ8N488 228 aaPredicted RBP6.89□□□□□ -1.31
CDH13-209ENST00000567109 LRFN2Q9ULH4 789 aa6.89□□□□□ -1.31
CDH13-209ENST00000567109 EXOC7Q9UPT5 735 aa6.89□□□□□ -1.31
CDH13-209ENST00000567109 CAPN9O14815 690 aa6.89□□□□□ -1.31
CDH13-209ENST00000567109 RNF113AO15541 343 aaKnown RBP6.89□□□□□ -1.31
CDH13-209ENST00000567109 KIF1CO43896 1103 aaKnown RBP6.89□□□□□ -1.31
CDH13-209ENST00000567109 CIB2O75838 187 aa6.89□□□□□ -1.31
CDH13-209ENST00000567109 CDR2Q01850 454 aa6.89□□□□□ -1.31
CDH13-209ENST00000567109 TRIM14Q14142 442 aa6.89□□□□□ -1.31
CDH13-209ENST00000567109 TTLL7Q6ZT98 887 aa6.89□□□□□ -1.31
CDH13-209ENST00000567109 CHST3Q7LGC8 479 aa6.89□□□□□ -1.31
CDH13-209ENST00000567109 FCHSD1Q86WN1 690 aa6.89□□□□□ -1.31
CDH13-209ENST00000567109 FAM89AQ96GI7 184 aa6.89□□□□□ -1.31
CDH13-209ENST00000567109 SPON1Q9HCB6 807 aa6.89□□□□□ -1.31
CDH13-209ENST00000567109 PFDN6O15212 129 aa6.89□□□□□ -1.31
CDH13-209ENST00000567109 GRAPQ13588 217 aa6.89□□□□□ -1.31
CDH13-209ENST00000567109 CCDC93Q567U6 631 aa6.89□□□□□ -1.31
CDH13-209ENST00000567109 SULF1Q8IWU6 871 aa6.89□□□□□ -1.31
CDH13-209ENST00000567109 GRAPLQ8TC17 118 aaPredicted RBP6.89□□□□□ -1.31
CDH13-209ENST00000567109 MTRF1LQ9UGC7 380 aaKnown RBP6.89□□□□□ -1.31
CDH13-209ENST00000567109 CALUO43852 315 aaPredicted RBP6.89□□□□□ -1.31
CDH13-209ENST00000567109 TCP10Q12799 353 aa6.89□□□□□ -1.31
CDH13-209ENST00000567109 PPP2R5EQ16537 467 aa6.89□□□□□ -1.31
CDH13-209ENST00000567109 RILPL1Q5EBL4 403 aa6.89□□□□□ -1.31
CDH13-209ENST00000567109 TEX11Q8IYF3 940 aa6.89□□□□□ -1.31
CDH13-209ENST00000567109 DACT3Q96B18 629 aaPredicted RBP6.89□□□□□ -1.31
CDH13-209ENST00000567109 RSRC1Q96IZ7 334 aaKnown RBP6.89□□□□□ -1.31
CDH13-209ENST00000567109 TRIM56Q9BRZ2 755 aaKnown RBP6.89□□□□□ -1.31
CDH13-209ENST00000567109 COL5A2P05997 1499 aaPredicted RBP6.89□□□□□ -1.31
CDH13-209ENST00000567109 ZEB2O60315 1214 aa6.89□□□□□ -1.31
CDH13-209ENST00000567109 NPR1P16066 1061 aa6.89□□□□□ -1.31
CDH13-209ENST00000567109 ATP5DP30049 168 aa6.89□□□□□ -1.31
CDH13-209ENST00000567109 C20orf194Q5TEA3 1177 aa6.89□□□□□ -1.31
CDH13-209ENST00000567109 ARHGEF16Q5VV41 709 aa6.89□□□□□ -1.31
CDH13-209ENST00000567109 CEP120Q8N960 986 aa6.89□□□□□ -1.31
CDH13-209ENST00000567109 MASTLQ96GX5 879 aa6.89□□□□□ -1.31
CDH13-209ENST00000567109 BRIP1Q9BX63 1249 aa6.89□□□□□ -1.31
CDH13-209ENST00000567109 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.89□□□□□ -1.31
CDH13-209ENST00000567109 LEMD3Q9Y2U8 911 aa6.89□□□□□ -1.31
CDH13-209ENST00000567109 ARHGEF35A5YM69 484 aa6.88□□□□□ -1.31
CDH13-209ENST00000567109 MAP3K7O43318 606 aa6.88□□□□□ -1.31
CDH13-209ENST00000567109 TACC1O75410 805 aa6.88□□□□□ -1.31
CDH13-209ENST00000567109 ZSCAN22P10073 491 aaPredicted RBP6.88□□□□□ -1.31
CDH13-209ENST00000567109 NT5C2P49902 561 aa6.88□□□□□ -1.31
CDH13-209ENST00000567109 RBM46Q8TBY0 533 aaKnown RBP6.88□□□□□ -1.31
CDH13-209ENST00000567109 BCS1LQ9Y276 419 aa6.88□□□□□ -1.31
CDH13-209ENST00000567109 KLF18A0A0U1RQI7 1052 aa6.88□□□□□ -1.31
CDH13-209ENST00000567109 APBA1Q02410 837 aa6.88□□□□□ -1.31
CDH13-209ENST00000567109 RTKN2Q8IZC4 609 aa6.88□□□□□ -1.31
CDH13-209ENST00000567109 GBP7Q8N8V2 638 aaPredicted RBP6.88□□□□□ -1.31
CDH13-209ENST00000567109 ZKSCAN3Q9BRR0 538 aa6.88□□□□□ -1.31
CDH13-209ENST00000567109 PNMA2Q9UL42 364 aa6.88□□□□□ -1.31
CDH13-209ENST00000567109 PXDNQ92626 1479 aa6.88□□□□□ -1.31
CDH13-209ENST00000567109 TNS2Q63HR2 1409 aa6.88□□□□□ -1.31
CDH13-209ENST00000567109 UBXN1Q04323 297 aa6.88□□□□□ -1.31
CDH13-209ENST00000567109 NAA25Q14CX7 972 aa6.88□□□□□ -1.31
CDH13-209ENST00000567109 TTC22Q5TAA0 569 aa6.88□□□□□ -1.31
CDH13-209ENST00000567109 KIAA1841Q6NSI8 718 aa6.88□□□□□ -1.31
CDH13-209ENST00000567109 CPXCR1Q8N123 301 aa6.88□□□□□ -1.31
CDH13-209ENST00000567109 SLC7A5P2Q9GIP4 190 aa6.88□□□□□ -1.31
CDH13-209ENST00000567109 SUDS3Q9H7L9 328 aaPredicted RBP6.88□□□□□ -1.31
CDH13-209ENST00000567109 AS3MTQ9HBK9 375 aa6.88□□□□□ -1.31
CDH13-209ENST00000567109 RNASELQ05823 741 aaKnown RBP6.88□□□□□ -1.31
CDH13-209ENST00000567109 ACBD5Q5T8D3 534 aaPredicted RBP6.88□□□□□ -1.31
CDH13-209ENST00000567109 CDC37L1Q7L3B6 337 aa6.88□□□□□ -1.31
CDH13-209ENST00000567109 TTC6Q86TZ1 520 aa6.88□□□□□ -1.31
CDH13-209ENST00000567109 MIPOL1Q8TD10 442 aa6.88□□□□□ -1.31
CDH13-209ENST00000567109 LEO1Q8WVC0 666 aaPredicted RBP6.88□□□□□ -1.31
CDH13-209ENST00000567109 STMN2Q93045 179 aa6.88□□□□□ -1.31
CDH13-209ENST00000567109 TRPC6Q9Y210 931 aa6.88□□□□□ -1.31
CDH13-209ENST00000567109 MAPK8IP2Q13387 824 aaPredicted RBP6.88□□□□□ -1.31
CDH13-209ENST00000567109 MIGA1Q8NAN2 632 aa6.88□□□□□ -1.31
CDH13-209ENST00000567109 TFIP11Q9UBB9 837 aaKnown RBP6.88□□□□□ -1.31
CDH13-209ENST00000567109 XDHP47989 1333 aa6.88□□□□□ -1.31
CDH13-209ENST00000567109 ADAMTSL3P82987 1691 aa6.88□□□□□ -1.31
CDH13-209ENST00000567109 MAN1A1P33908 653 aa6.88□□□□□ -1.31
CDH13-209ENST00000567109 TNNI3KQ59H18 835 aa6.88□□□□□ -1.31
CDH13-209ENST00000567109 OTUD6AQ7L8S5 288 aa6.88□□□□□ -1.31
CDH13-209ENST00000567109 ATP2A3Q93084 1043 aa6.88□□□□□ -1.31
CDH13-209ENST00000567109 C16orf45Q96MC5 204 aaPredicted RBP6.88□□□□□ -1.31
CDH13-209ENST00000567109 PLA2G12BQ9BX93 195 aa6.88□□□□□ -1.31
CDH13-209ENST00000567109 NUCKS1Q9H1E3 243 aaKnown RBP6.88□□□□□ -1.31
CDH13-209ENST00000567109 ZSWIM4Q9H7M6 989 aa6.88□□□□□ -1.31
CDH13-209ENST00000567109 FPGT-TNNI3KV9GXZ4 949 aa6.88□□□□□ -1.31
CDH13-209ENST00000567109 MYH8P13535 1937 aa6.88□□□□□ -1.31
CDH13-209ENST00000567109 MROH2AA6NES4 1674 aa6.88□□□□□ -1.31
CDH13-209ENST00000567109 KDM5AP29375 1690 aaKnown RBP6.88□□□□□ -1.31
CDH13-209ENST00000567109 SPOPO43791 374 aa6.87□□□□□ -1.31
CDH13-209ENST00000567109 HSP90AA4PQ58FG1 418 aa6.87□□□□□ -1.31
CDH13-209ENST00000567109 IPO11Q9UI26 975 aaKnown RBP6.87□□□□□ -1.31
CDH13-209ENST00000567109 ANAPC5Q9UJX4 755 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms