RNA–Protein interactions for RNA: ENST00000567011.1

CPNE2-209, Transcript of copine 2, humanhuman

TSL 2

Gene CPNE2, Length 901 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2-209ENST00000567011 C12orf60Q5U649 245 aa15.21■□□□□ 0.03
CPNE2-209ENST00000567011 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.21■□□□□ 0.03
CPNE2-209ENST00000567011 MB21D1Q8N884 522 aa15.21■□□□□ 0.03
CPNE2-209ENST00000567011 MROH8Q9H579 483 aa15.21■□□□□ 0.03
CPNE2-209ENST00000567011 ARHGEF10LQ9HCE6 1279 aa15.21■□□□□ 0.03
CPNE2-209ENST00000567011 COG6Q9Y2V7 657 aa15.21■□□□□ 0.03
CPNE2-209ENST00000567011 ZNF236Q9UL36 1845 aa15.21■□□□□ 0.03
CPNE2-209ENST00000567011 EYSQ5T1H1 3165 aa15.21■□□□□ 0.03
CPNE2-209ENST00000567011 VCANP13611 3396 aa15.2■□□□□ 0.02
CPNE2-209ENST00000567011 CDH23Q9H251 3354 aa15.2■□□□□ 0.02
CPNE2-209ENST00000567011 PGK1P00558 417 aa15.2■□□□□ 0.02
CPNE2-209ENST00000567011 FAM109BQ6ICB4 259 aaPredicted RBP15.2■□□□□ 0.02
CPNE2-209ENST00000567011 ABRAQ8N0Z2 381 aa15.2■□□□□ 0.02
CPNE2-209ENST00000567011 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.2■□□□□ 0.02
CPNE2-209ENST00000567011 LTBP2Q14767 1821 aa15.2■□□□□ 0.02
CPNE2-209ENST00000567011 WDR46O15213 610 aaKnown RBP15.19■□□□□ 0.02
CPNE2-209ENST00000567011 RAD21O60216 631 aa15.19■□□□□ 0.02
CPNE2-209ENST00000567011 FCER1AP12319 257 aa15.19■□□□□ 0.02
CPNE2-209ENST00000567011 EPHB4P54760 987 aa15.19■□□□□ 0.02
CPNE2-209ENST00000567011 TLE2Q04725 743 aa15.19■□□□□ 0.02
CPNE2-209ENST00000567011 ZNF697Q5TEC3 545 aa15.19■□□□□ 0.02
CPNE2-209ENST00000567011 CTR9Q6PD62 1173 aa15.19■□□□□ 0.02
CPNE2-209ENST00000567011 C16orf86Q6ZW13 317 aa15.19■□□□□ 0.02
CPNE2-209ENST00000567011 STK11IPQ8N1F8 1099 aa15.19■□□□□ 0.02
CPNE2-209ENST00000567011 MMP19Q99542 508 aa15.19■□□□□ 0.02
CPNE2-209ENST00000567011 NUP88Q99567 741 aaPredicted RBP15.19■□□□□ 0.02
CPNE2-209ENST00000567011 CDX2Q99626 313 aaPredicted RBP15.19■□□□□ 0.02
CPNE2-209ENST00000567011 PUS7LQ9H0K6 701 aaKnown RBP15.19■□□□□ 0.02
CPNE2-209ENST00000567011 TTYH1Q9H313 450 aaPredicted RBP15.19■□□□□ 0.02
CPNE2-209ENST00000567011 XPNPEP3Q9NQH7 507 aa15.19■□□□□ 0.02
CPNE2-209ENST00000567011 ATP8A2Q9NTI2 1148 aa15.19■□□□□ 0.02
CPNE2-209ENST00000567011 ZBTB40Q9NUA8 1239 aa15.19■□□□□ 0.02
CPNE2-209ENST00000567011 ADAMTS5Q9UNA0 930 aa15.19■□□□□ 0.02
CPNE2-209ENST00000567011 ATP5JP18859 108 aa15.18■□□□□ 0.02
CPNE2-209ENST00000567011 FAM83BQ5T0W9 1011 aa15.18■□□□□ 0.02
CPNE2-209ENST00000567011 REPS2Q8NFH8 660 aa15.18■□□□□ 0.02
CPNE2-209ENST00000567011 HAUS7Q99871 368 aa15.18■□□□□ 0.02
CPNE2-209ENST00000567011 SLC5A4Q9NY91 659 aa15.18■□□□□ 0.02
CPNE2-209ENST00000567011 ZNF214Q9UL59 606 aaPredicted RBP15.18■□□□□ 0.02
CPNE2-209ENST00000567011 PHF24Q9UPV7 400 aa15.18■□□□□ 0.02
CPNE2-209ENST00000567011 SLC4A4Q9Y6R1 1079 aa15.18■□□□□ 0.02
CPNE2-209ENST00000567011 VWA5AO00534 786 aa15.17■□□□□ 0.02
CPNE2-209ENST00000567011 SMARCA5O60264 1052 aaPredicted RBP15.17■□□□□ 0.02
CPNE2-209ENST00000567011 ZNF865P0CJ78 1059 aaPredicted RBP15.17■□□□□ 0.02
CPNE2-209ENST00000567011 IRX5P78411 483 aaPredicted RBP15.17■□□□□ 0.02
CPNE2-209ENST00000567011 ZNF792Q3KQV3 632 aa15.17■□□□□ 0.02
CPNE2-209ENST00000567011 RIOX2Q8IUF8 465 aa15.17■□□□□ 0.02
CPNE2-209ENST00000567011 RPAP2Q8IXW5 612 aaPredicted RBP15.17■□□□□ 0.02
CPNE2-209ENST00000567011 CCDC17Q96LX7 622 aa15.17■□□□□ 0.02
CPNE2-209ENST00000567011 SEMA6BQ9H3T3 888 aa15.17■□□□□ 0.02
CPNE2-209ENST00000567011 SH2D4AQ9H788 454 aa15.17■□□□□ 0.02
CPNE2-209ENST00000567011 PPP1R9AQ9ULJ8 1098 aa15.17■□□□□ 0.02
CPNE2-209ENST00000567011 ZBED9Q6R2W3 1325 aa15.17■□□□□ 0.02
CPNE2-209ENST00000567011 SLC25A27O95847 323 aa15.16■□□□□ 0.02
CPNE2-209ENST00000567011 RARBP10826 455 aa15.16■□□□□ 0.02
CPNE2-209ENST00000567011 STAT3P40763 770 aa15.16■□□□□ 0.02
CPNE2-209ENST00000567011 C1orf53Q5VUE5 145 aa15.16■□□□□ 0.02
CPNE2-209ENST00000567011 MYLIPQ8WY64 445 aa15.16■□□□□ 0.02
CPNE2-209ENST00000567011 TINF2Q9BSI4 451 aa15.16■□□□□ 0.02
CPNE2-209ENST00000567011 RIPK3Q9Y572 518 aa15.16■□□□□ 0.02
CPNE2-209ENST00000567011 A0A1W2PQ45 241 aaPredicted RBP15.15■□□□□ 0.02
CPNE2-209ENST00000567011 A0A1W2PQY0 241 aa15.15■□□□□ 0.02
CPNE2-209ENST00000567011 MYADML2A6NDP7 307 aa15.15■□□□□ 0.02
CPNE2-209ENST00000567011 PQBP1O60828 265 aaKnown RBP15.15■□□□□ 0.02
CPNE2-209ENST00000567011 RAB11FIP3O75154 756 aa15.15■□□□□ 0.02
CPNE2-209ENST00000567011 ADAMTS4O75173 837 aa15.15■□□□□ 0.02
CPNE2-209ENST00000567011 HMMRO75330 724 aa15.15■□□□□ 0.02
CPNE2-209ENST00000567011 KCTD2Q14681 263 aa15.15■□□□□ 0.02
CPNE2-209ENST00000567011 UBE3CQ15386 1083 aa15.15■□□□□ 0.02
CPNE2-209ENST00000567011 TSHZ3Q63HK5 1081 aa15.15■□□□□ 0.02
CPNE2-209ENST00000567011 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.15■□□□□ 0.02
CPNE2-209ENST00000567011 KANSL2Q9H9L4 492 aa15.15■□□□□ 0.02
CPNE2-209ENST00000567011 CLTBP09497 229 aa15.14■□□□□ 0.01
CPNE2-209ENST00000567011 MAFAQ8NHW3 353 aaPredicted RBP15.14■□□□□ 0.01
CPNE2-209ENST00000567011 GOPCQ9HD26 462 aa15.14■□□□□ 0.01
CPNE2-209ENST00000567011 DDX19BQ9UMR2 479 aa15.14■□□□□ 0.01
CPNE2-209ENST00000567011 ADCY6O43306 1168 aa15.13■□□□□ 0.01
CPNE2-209ENST00000567011 SNAI1O95863 264 aaPredicted RBP15.13■□□□□ 0.01
CPNE2-209ENST00000567011 NDUFB10O96000 172 aa15.13■□□□□ 0.01
CPNE2-209ENST00000567011 RASA1P20936 1047 aa15.13■□□□□ 0.01
CPNE2-209ENST00000567011 SLC4A3P48751 1232 aa15.13■□□□□ 0.01
CPNE2-209ENST00000567011 SMAD3P84022 425 aaKnown RBP15.13■□□□□ 0.01
CPNE2-209ENST00000567011 C20orf194Q5TEA3 1177 aa15.13■□□□□ 0.01
CPNE2-209ENST00000567011 SNRNP48Q6IEG0 339 aaKnown RBP15.13■□□□□ 0.01
CPNE2-209ENST00000567011 RNF180Q86T96 592 aa15.13■□□□□ 0.01
CPNE2-209ENST00000567011 AMOTL1Q8IY63 956 aa15.13■□□□□ 0.01
CPNE2-209ENST00000567011 RNPC3Q96LT9 517 aaKnown RBP15.13■□□□□ 0.01
CPNE2-209ENST00000567011 STRBPQ96SI9 672 aaKnown RBP15.13■□□□□ 0.01
CPNE2-209ENST00000567011 NRBP1Q9UHY1 535 aa15.13■□□□□ 0.01
CPNE2-209ENST00000567011 TACC3Q9Y6A5 838 aa15.13■□□□□ 0.01
CPNE2-209ENST00000567011 BAZ2AQ9UIF9 1905 aaKnown RBP15.13■□□□□ 0.01
CPNE2-209ENST00000567011 SYNRGQ9UMZ2 1314 aa15.13■□□□□ 0.01
CPNE2-209ENST00000567011 ROBO3Q96MS0 1386 aa15.12■□□□□ 0.01
CPNE2-209ENST00000567011 SPTBN5Q9NRC6 3674 aaKnown RBP15.12■□□□□ 0.01
CPNE2-209ENST00000567011 GSG1L2A8MUP6 293 aa15.12■□□□□ 0.01
CPNE2-209ENST00000567011 AKR1A1P14550 325 aa15.12■□□□□ 0.01
CPNE2-209ENST00000567011 FAAP100Q0VG06 881 aa15.12■□□□□ 0.01
CPNE2-209ENST00000567011 OSBP2Q969R2 916 aa15.12■□□□□ 0.01
CPNE2-209ENST00000567011 DDRGK1Q96HY6 314 aa15.12■□□□□ 0.01
CPNE2-209ENST00000567011 SLF1Q9BQI6 1058 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms