RNA–Protein interactions for RNA: ENST00000566640.1

SIN3A-207, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 944 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-207ENST00000566640 COA7Q96BR5 231 aa8.51□□□□□ -1.05
SIN3A-207ENST00000566640 DEFB118Q96PH6 123 aa8.51□□□□□ -1.05
SIN3A-207ENST00000566640 DNAJC2Q99543 621 aaKnown RBP8.51□□□□□ -1.05
SIN3A-207ENST00000566640 CHMP4BQ9H444 224 aaKnown RBP8.51□□□□□ -1.05
SIN3A-207ENST00000566640 AATFQ9NY61 560 aaKnown RBP eCLIP8.51□□□□□ -1.05
SIN3A-207ENST00000566640 SIPA1L1O43166 1804 aa8.51□□□□□ -1.05
SIN3A-207ENST00000566640 LAMA3Q16787 3333 aa8.51□□□□□ -1.05
SIN3A-207ENST00000566640 SPTLC1O15269 473 aa8.5□□□□□ -1.05
SIN3A-207ENST00000566640 IDH1O75874 414 aaKnown RBP8.5□□□□□ -1.05
SIN3A-207ENST00000566640 BAG3O95817 575 aa8.5□□□□□ -1.05
SIN3A-207ENST00000566640 HMGCRP04035 888 aa8.5□□□□□ -1.05
SIN3A-207ENST00000566640 ASNSP08243 561 aa8.5□□□□□ -1.05
SIN3A-207ENST00000566640 IFIT2P09913 472 aaKnown RBP8.5□□□□□ -1.05
SIN3A-207ENST00000566640 PABPC4Q13310 644 aaKnown RBP eCLIP8.5□□□□□ -1.05
SIN3A-207ENST00000566640 MTMR2Q13614 643 aa8.5□□□□□ -1.05
SIN3A-207ENST00000566640 HSP90AB4PQ58FF6 505 aa8.5□□□□□ -1.05
SIN3A-207ENST00000566640 FOXP4Q8IVH2 680 aaPredicted RBP8.5□□□□□ -1.05
SIN3A-207ENST00000566640 MAPKAPK5Q8IW41 473 aa8.5□□□□□ -1.05
SIN3A-207ENST00000566640 CLASRPQ8N2M8 674 aaKnown RBP8.5□□□□□ -1.05
SIN3A-207ENST00000566640 TGFBRAP1Q8WUH2 860 aa8.5□□□□□ -1.05
SIN3A-207ENST00000566640 KIF1BPQ96EK5 621 aa8.5□□□□□ -1.05
SIN3A-207ENST00000566640 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.5□□□□□ -1.05
SIN3A-207ENST00000566640 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.5□□□□□ -1.05
SIN3A-207ENST00000566640 AS3MTQ9HBK9 375 aa8.5□□□□□ -1.05
SIN3A-207ENST00000566640 PIH1D3Q9NQM4 214 aaKnown RBP8.5□□□□□ -1.05
SIN3A-207ENST00000566640 DDX60LQ5H9U9 1706 aaKnown RBP8.49□□□□□ -1.05
SIN3A-207ENST00000566640 MYH1P12882 1939 aa8.49□□□□□ -1.05
SIN3A-207ENST00000566640 LOC285556D6RIA3 1793 aa8.49□□□□□ -1.05
SIN3A-207ENST00000566640 CLK2P49760 499 aaKnown RBP8.49□□□□□ -1.05
SIN3A-207ENST00000566640 TRIM32Q13049 653 aa8.49□□□□□ -1.05
SIN3A-207ENST00000566640 MAP3K21Q5TCX8 1036 aa8.49□□□□□ -1.05
SIN3A-207ENST00000566640 TSHZ3Q63HK5 1081 aa8.49□□□□□ -1.05
SIN3A-207ENST00000566640 MIGA1Q8NAN2 632 aa8.49□□□□□ -1.05
SIN3A-207ENST00000566640 DIS3LQ8TF46 1054 aaKnown RBP8.49□□□□□ -1.05
SIN3A-207ENST00000566640 TRIB2Q92519 343 aa8.49□□□□□ -1.05
SIN3A-207ENST00000566640 EDC3Q96F86 508 aaKnown RBP8.49□□□□□ -1.05
SIN3A-207ENST00000566640 PCMTD1Q96MG8 357 aaPredicted RBP8.49□□□□□ -1.05
SIN3A-207ENST00000566640 NOL10Q9BSC4 688 aaKnown RBP8.49□□□□□ -1.05
SIN3A-207ENST00000566640 ANTXR1Q9H6X2 564 aa8.49□□□□□ -1.05
SIN3A-207ENST00000566640 TXNRD2Q9NNW7 524 aa8.49□□□□□ -1.05
SIN3A-207ENST00000566640 GINM1Q9NU53 330 aa8.49□□□□□ -1.05
SIN3A-207ENST00000566640 PALD1Q9ULE6 856 aa8.49□□□□□ -1.05
SIN3A-207ENST00000566640 ZBTB21Q9ULJ3 1066 aa8.49□□□□□ -1.05
SIN3A-207ENST00000566640 PCDHB3Q9Y5E6 796 aa8.49□□□□□ -1.05
SIN3A-207ENST00000566640 PCDHB15Q9Y5E8 787 aa8.49□□□□□ -1.05
SIN3A-207ENST00000566640 NR2E3Q9Y5X4 410 aa8.49□□□□□ -1.05
SIN3A-207ENST00000566640 PHIPQ8WWQ0 1821 aa8.49□□□□□ -1.05
SIN3A-207ENST00000566640 A0A1W2PPC1 479 aa8.48□□□□□ -1.05
SIN3A-207ENST00000566640 C19orf81C9J6K1 198 aa8.48□□□□□ -1.05
SIN3A-207ENST00000566640 USP17L10C9JJH3 530 aa8.48□□□□□ -1.05
SIN3A-207ENST00000566640 GOLIM4O00461 696 aa8.48□□□□□ -1.05
SIN3A-207ENST00000566640 PEX10O60683 326 aa8.48□□□□□ -1.05
SIN3A-207ENST00000566640 GDF11O95390 407 aa8.48□□□□□ -1.05
SIN3A-207ENST00000566640 TFRCP02786 760 aaKnown RBP8.48□□□□□ -1.05
SIN3A-207ENST00000566640 HERVK_113P62684 666 aa8.48□□□□□ -1.05
SIN3A-207ENST00000566640 DYNLL1P63167 89 aaKnown RBP8.48□□□□□ -1.05
SIN3A-207ENST00000566640 IRX6P78412 446 aaPredicted RBP8.48□□□□□ -1.05
SIN3A-207ENST00000566640 GUCA2AQ02747 115 aa8.48□□□□□ -1.05
SIN3A-207ENST00000566640 PUS10Q3MIT2 529 aaKnown RBP8.48□□□□□ -1.05
SIN3A-207ENST00000566640 TRAF7Q6Q0C0 670 aa8.48□□□□□ -1.05
SIN3A-207ENST00000566640 MAGEB6Q8N7X4 407 aa8.48□□□□□ -1.05
SIN3A-207ENST00000566640 ANKLE1Q8NAG6 615 aa8.48□□□□□ -1.05
SIN3A-207ENST00000566640 USP6NLQ92738 828 aa8.48□□□□□ -1.05
SIN3A-207ENST00000566640 PAWRQ96IZ0 340 aaKnown RBP8.48□□□□□ -1.05
SIN3A-207ENST00000566640 C12orf42Q96LP6 360 aa8.48□□□□□ -1.05
SIN3A-207ENST00000566640 P2RX7Q99572 595 aaKnown RBP8.48□□□□□ -1.05
SIN3A-207ENST00000566640 LRRCC1Q9C099 1032 aa8.48□□□□□ -1.05
SIN3A-207ENST00000566640 RBPJLQ9UBG7 517 aa8.48□□□□□ -1.05
SIN3A-207ENST00000566640 PCDHGC3Q9UN70 934 aa8.48□□□□□ -1.05
SIN3A-207ENST00000566640 RPTORQ8N122 1335 aa8.48□□□□□ -1.05
SIN3A-207ENST00000566640 PTPRFP10586 1907 aa8.47□□□□□ -1.05
SIN3A-207ENST00000566640 MYH8P13535 1937 aa8.47□□□□□ -1.05
SIN3A-207ENST00000566640 RAB11FIP3O75154 756 aa8.47□□□□□ -1.05
SIN3A-207ENST00000566640 HLA-DOAP06340 250 aa8.47□□□□□ -1.05
SIN3A-207ENST00000566640 XRCC5P13010 732 aaKnown RBP8.47□□□□□ -1.05
SIN3A-207ENST00000566640 CYP7A1P22680 504 aa8.47□□□□□ -1.05
SIN3A-207ENST00000566640 IRX3P78415 501 aaPredicted RBP8.47□□□□□ -1.05
SIN3A-207ENST00000566640 TUSC1Q2TAM9 212 aa8.47□□□□□ -1.05
SIN3A-207ENST00000566640 Q3C1V9 767 aa8.47□□□□□ -1.05
SIN3A-207ENST00000566640 TATDN1Q6P1N9 297 aa8.47□□□□□ -1.05
SIN3A-207ENST00000566640 TMED8Q6PL24 325 aaPredicted RBP8.47□□□□□ -1.05
SIN3A-207ENST00000566640 NECAB2Q7Z6G3 386 aa8.47□□□□□ -1.05
SIN3A-207ENST00000566640 CERS3Q8IU89 383 aa8.47□□□□□ -1.05
SIN3A-207ENST00000566640 CRACR2BQ8N4Y2 399 aaPredicted RBP8.47□□□□□ -1.05
SIN3A-207ENST00000566640 GPRC5AQ8NFJ5 357 aa8.47□□□□□ -1.05
SIN3A-207ENST00000566640 SOCS4Q8WXH5 440 aa8.47□□□□□ -1.05
SIN3A-207ENST00000566640 GDF15Q99988 308 aa8.47□□□□□ -1.05
SIN3A-207ENST00000566640 EHD4Q9H223 541 aa8.47□□□□□ -1.05
SIN3A-207ENST00000566640 PORCNQ9H237 461 aa8.47□□□□□ -1.05
SIN3A-207ENST00000566640 HMX1Q9NP08 348 aaPredicted RBP8.47□□□□□ -1.05
SIN3A-207ENST00000566640 TMOD4Q9NZQ9 345 aa8.47□□□□□ -1.05
SIN3A-207ENST00000566640 SAP30BPQ9UHR5 308 aaKnown RBP8.47□□□□□ -1.05
SIN3A-207ENST00000566640 OGDHLQ9ULD0 1010 aa8.47□□□□□ -1.05
SIN3A-207ENST00000566640 BAZ2AQ9UIF9 1905 aaKnown RBP8.46□□□□□ -1.05
SIN3A-207ENST00000566640 COL6A3P12111 3177 aa8.46□□□□□ -1.05
SIN3A-207ENST00000566640 SOX1O00570 391 aaPredicted RBP8.46□□□□□ -1.06
SIN3A-207ENST00000566640 GH2P01242 217 aa8.46□□□□□ -1.06
SIN3A-207ENST00000566640 MAPK4P31152 587 aa8.46□□□□□ -1.06
SIN3A-207ENST00000566640 ERVK-9P63128 1117 aa8.46□□□□□ -1.06
SIN3A-207ENST00000566640 ERVK-24P63145 666 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms