RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 RPN1P04843 607 aaKnown RBP13□□□□□ -0.33
CDH1-210ENST00000566612 CALCRLQ16602 461 aa13□□□□□ -0.33
CDH1-210ENST00000566612 TAF3Q5VWG9 929 aa13□□□□□ -0.33
CDH1-210ENST00000566612 CTR9Q6PD62 1173 aa13□□□□□ -0.33
CDH1-210ENST00000566612 SPDYE3A6NKU9 549 aa13□□□□□ -0.33
CDH1-210ENST00000566612 PPP1R12BO60237 982 aaPredicted RBP13□□□□□ -0.33
CDH1-210ENST00000566612 LMAN1P49257 510 aa13□□□□□ -0.33
CDH1-210ENST00000566612 KRT83P78385 493 aa13□□□□□ -0.33
CDH1-210ENST00000566612 CEP112Q8N8E3 955 aa13□□□□□ -0.33
CDH1-210ENST00000566612 DPF2Q92785 391 aa13□□□□□ -0.33
CDH1-210ENST00000566612 PAGE5Q96GU1 130 aa13□□□□□ -0.33
CDH1-210ENST00000566612 ZFP91Q96JP5 570 aaPredicted RBP13□□□□□ -0.33
CDH1-210ENST00000566612 LRRC27Q9C0I9 530 aa13□□□□□ -0.33
CDH1-210ENST00000566612 SAMM50Q9Y512 469 aa13□□□□□ -0.33
CDH1-210ENST00000566612 SEMA3EO15041 775 aa13□□□□□ -0.33
CDH1-210ENST00000566612 CYP26C1Q6V0L0 522 aa13□□□□□ -0.33
CDH1-210ENST00000566612 TMTC3Q6ZXV5 915 aa13□□□□□ -0.33
CDH1-210ENST00000566612 SH3RF3Q8TEJ3 882 aaPredicted RBP13□□□□□ -0.33
CDH1-210ENST00000566612 ALS2CR12Q96Q35 445 aa13□□□□□ -0.33
CDH1-210ENST00000566612 GSDMAQ96QA5 445 aa13□□□□□ -0.33
CDH1-210ENST00000566612 ABCC12Q96J65 1359 aa13□□□□□ -0.33
CDH1-210ENST00000566612 PSDA5PKW4 1024 aaPredicted RBP12.99□□□□□ -0.33
CDH1-210ENST00000566612 SLC1A4P43007 532 aa12.99□□□□□ -0.33
CDH1-210ENST00000566612 ADCY7P51828 1080 aa12.99□□□□□ -0.33
CDH1-210ENST00000566612 GRIN1Q05586 938 aa12.99□□□□□ -0.33
CDH1-210ENST00000566612 METTL16Q86W50 562 aaKnown RBP12.99□□□□□ -0.33
CDH1-210ENST00000566612 VSTM4Q8IW00 320 aa12.99□□□□□ -0.33
CDH1-210ENST00000566612 BRIP1Q9BX63 1249 aa12.99□□□□□ -0.33
CDH1-210ENST00000566612 VEZTQ9HBM0 779 aa12.99□□□□□ -0.33
CDH1-210ENST00000566612 CWC15Q9P013 229 aaKnown RBP12.99□□□□□ -0.33
CDH1-210ENST00000566612 PARP3Q9Y6F1 533 aa12.99□□□□□ -0.33
CDH1-210ENST00000566612 KNDC1Q76NI1 1749 aa12.99□□□□□ -0.33
CDH1-210ENST00000566612 TMCO5BA8MYB1 307 aa12.99□□□□□ -0.33
CDH1-210ENST00000566612 GTPBP6O43824 516 aaPredicted RBP12.99□□□□□ -0.33
CDH1-210ENST00000566612 TBCAO75347 108 aaKnown RBP12.99□□□□□ -0.33
CDH1-210ENST00000566612 MSL1Q68DK7 614 aa12.99□□□□□ -0.33
CDH1-210ENST00000566612 TMTC1Q8IUR5 882 aa12.99□□□□□ -0.33
CDH1-210ENST00000566612 KIAA0825Q8IV33 1275 aa12.99□□□□□ -0.33
CDH1-210ENST00000566612 ENOX1Q8TC92 643 aaKnown RBP12.99□□□□□ -0.33
CDH1-210ENST00000566612 PSMB7Q99436 277 aa12.99□□□□□ -0.33
CDH1-210ENST00000566612 FAM207AQ9NSI2 230 aaPredicted RBP12.99□□□□□ -0.33
CDH1-210ENST00000566612 XDHP47989 1333 aa12.99□□□□□ -0.33
CDH1-210ENST00000566612 PCP11498 1178 aaKnown RBP12.99□□□□□ -0.33
CDH1-210ENST00000566612 CHMP4BP1P59074 171 aa12.99□□□□□ -0.33
CDH1-210ENST00000566612 USH1GQ495M9 461 aa12.99□□□□□ -0.33
CDH1-210ENST00000566612 NELFCDQ8IXH7 590 aa12.99□□□□□ -0.33
CDH1-210ENST00000566612 USP8P40818 1118 aa12.98□□□□□ -0.33
CDH1-210ENST00000566612 RBL2Q08999 1139 aa12.98□□□□□ -0.33
CDH1-210ENST00000566612 ZYXQ15942 572 aaKnown RBP12.98□□□□□ -0.33
CDH1-210ENST00000566612 MAP9Q49MG5 647 aa12.98□□□□□ -0.33
CDH1-210ENST00000566612 NEK11Q8NG66 645 aa12.98□□□□□ -0.33
CDH1-210ENST00000566612 SLC39A2Q9NP94 309 aa12.98□□□□□ -0.33
CDH1-210ENST00000566612 MROH7-TTC4A0A0A0MT08 1334 aa12.98□□□□□ -0.33
CDH1-210ENST00000566612 RPS6KA4O75676 772 aa12.98□□□□□ -0.33
CDH1-210ENST00000566612 ERCC5P28715 1186 aaPredicted RBP12.98□□□□□ -0.33
CDH1-210ENST00000566612 ERMNQ8TAM6 284 aa12.98□□□□□ -0.33
CDH1-210ENST00000566612 THRAP3Q9Y2W1 955 aaKnown RBP12.98□□□□□ -0.33
CDH1-210ENST00000566612 RGPD8O14715 1765 aaPredicted RBP12.98□□□□□ -0.33
CDH1-210ENST00000566612 FAM170AA1A519 330 aa12.98□□□□□ -0.33
CDH1-210ENST00000566612 STX10O60499 249 aa12.98□□□□□ -0.33
CDH1-210ENST00000566612 SERPINB2P05120 415 aa12.98□□□□□ -0.33
CDH1-210ENST00000566612 CNNM4Q6P4Q7 775 aa12.98□□□□□ -0.33
CDH1-210ENST00000566612 LRP10Q7Z4F1 713 aa12.98□□□□□ -0.33
CDH1-210ENST00000566612 EHBP1Q8NDI1 1231 aa12.98□□□□□ -0.33
CDH1-210ENST00000566612 ARHGEF1Q92888 912 aaKnown RBP12.98□□□□□ -0.33
CDH1-210ENST00000566612 NAPGQ99747 312 aaPredicted RBP12.98□□□□□ -0.33
CDH1-210ENST00000566612 LEMD3Q9Y2U8 911 aa12.98□□□□□ -0.33
CDH1-210ENST00000566612 POTEB2H3BUK9 544 aa12.98□□□□□ -0.33
CDH1-210ENST00000566612 NTSR2O95665 410 aa12.98□□□□□ -0.33
CDH1-210ENST00000566612 OR52Z1P0C646 297 aa12.98□□□□□ -0.33
CDH1-210ENST00000566612 HERC4Q5GLZ8 1057 aaPredicted RBP12.98□□□□□ -0.33
CDH1-210ENST00000566612 SYCP3Q8IZU3 236 aa12.98□□□□□ -0.33
CDH1-210ENST00000566612 TBC1D22AQ8WUA7 517 aa12.98□□□□□ -0.33
CDH1-210ENST00000566612 SLC4A9Q96Q91 983 aa12.98□□□□□ -0.33
CDH1-210ENST00000566612 LZTS2Q9BRK4 669 aa12.98□□□□□ -0.33
CDH1-210ENST00000566612 NARFQ9UHQ1 456 aa12.98□□□□□ -0.33
CDH1-210ENST00000566612 PCDHA4Q9UN74 947 aa12.98□□□□□ -0.33
CDH1-210ENST00000566612 WTIPA6NIX2 430 aaPredicted RBP12.97□□□□□ -0.33
CDH1-210ENST00000566612 SOWAHDA6NJG2 315 aa12.97□□□□□ -0.33
CDH1-210ENST00000566612 TACC1O75410 805 aa12.97□□□□□ -0.33
CDH1-210ENST00000566612 ARMCX5Q6P1M9 558 aa12.97□□□□□ -0.33
CDH1-210ENST00000566612 INTS5Q6P9B9 1019 aaKnown RBP12.97□□□□□ -0.33
CDH1-210ENST00000566612 NEK8Q86SG6 692 aa12.97□□□□□ -0.33
CDH1-210ENST00000566612 COA7Q96BR5 231 aa12.97□□□□□ -0.33
CDH1-210ENST00000566612 STK36Q9NRP7 1315 aa12.97□□□□□ -0.33
CDH1-210ENST00000566612 ATP2B4P23634 1241 aa12.97□□□□□ -0.33
CDH1-210ENST00000566612 ZNF512BQ96KM6 892 aaPredicted RBP12.97□□□□□ -0.33
CDH1-210ENST00000566612 PIGSQ96S52 555 aa12.97□□□□□ -0.33
CDH1-210ENST00000566612 GDAQ9Y2T3 454 aa12.97□□□□□ -0.33
CDH1-210ENST00000566612 BAZ2BQ9UIF8 2168 aaKnown RBP12.97□□□□□ -0.33
CDH1-210ENST00000566612 PNPLA7Q6ZV29 1317 aa12.97□□□□□ -0.33
CDH1-210ENST00000566612 KLRK1P26718 216 aa12.97□□□□□ -0.33
CDH1-210ENST00000566612 SLC16A2P36021 539 aa12.97□□□□□ -0.33
CDH1-210ENST00000566612 LONP1P36776 959 aaKnown RBP12.97□□□□□ -0.33
CDH1-210ENST00000566612 PLS1Q14651 629 aa12.97□□□□□ -0.33
CDH1-210ENST00000566612 VPS36Q86VN1 386 aa12.97□□□□□ -0.33
CDH1-210ENST00000566612 IL17RAQ96F46 866 aa12.97□□□□□ -0.33
CDH1-210ENST00000566612 AGXT2Q9BYV1 514 aa12.97□□□□□ -0.33
CDH1-210ENST00000566612 PKD2L1Q9P0L9 805 aa12.97□□□□□ -0.33
CDH1-210ENST00000566612 VIRMAQ69YN4 1812 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms