RNA–Protein interactions for RNA: ENST00000566400.5

BBS4-210, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 2,055 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-210ENST00000566400 EPSTI1Q96J88 318 aa10.56□□□□□ -0.72
BBS4-210ENST00000566400 RWDD2AQ9UIY3 292 aa10.56□□□□□ -0.72
BBS4-210ENST00000566400 DDX41Q9UJV9 622 aaKnown RBP10.56□□□□□ -0.72
BBS4-210ENST00000566400 NHSQ6T4R5 1651 aa10.55□□□□□ -0.72
BBS4-210ENST00000566400 CYP2D7A0A087X1C5 515 aa10.55□□□□□ -0.72
BBS4-210ENST00000566400 EFCAB8A8MWE9 144 aa10.55□□□□□ -0.72
BBS4-210ENST00000566400 TSPY3P0CV98 308 aa10.55□□□□□ -0.72
BBS4-210ENST00000566400 TSPY8P0CW00 308 aa10.55□□□□□ -0.72
BBS4-210ENST00000566400 PRPHP41219 470 aa10.55□□□□□ -0.72
BBS4-210ENST00000566400 TFAP4Q01664 338 aa10.55□□□□□ -0.72
BBS4-210ENST00000566400 STIM1Q13586 685 aa10.55□□□□□ -0.72
BBS4-210ENST00000566400 ZNF658Q5TYW1 1059 aaPredicted RBP10.55□□□□□ -0.72
BBS4-210ENST00000566400 PIK3AP1Q6ZUJ8 805 aa10.55□□□□□ -0.72
BBS4-210ENST00000566400 TMEM139Q8IV31 216 aa10.55□□□□□ -0.72
BBS4-210ENST00000566400 REXO1L1PQ8IX06 675 aa10.55□□□□□ -0.72
BBS4-210ENST00000566400 TC2NQ8N9U0 490 aa10.55□□□□□ -0.72
BBS4-210ENST00000566400 UBXN4Q92575 508 aa10.55□□□□□ -0.72
BBS4-210ENST00000566400 ANKIB1Q9P2G1 1089 aa10.55□□□□□ -0.72
BBS4-210ENST00000566400 CCNL1Q9UK58 526 aaPredicted RBP10.55□□□□□ -0.72
BBS4-210ENST00000566400 MYH2Q9UKX2 1941 aa10.54□□□□□ -0.72
BBS4-210ENST00000566400 LRRC10BA6NIK2 292 aa10.54□□□□□ -0.72
BBS4-210ENST00000566400 TMEM232C9JQI7 657 aa10.54□□□□□ -0.72
BBS4-210ENST00000566400 hCG_1984214I3L0E3 225 aa10.54□□□□□ -0.72
BBS4-210ENST00000566400 PRKCSHP14314 528 aaPredicted RBP10.54□□□□□ -0.72
BBS4-210ENST00000566400 CASQ1P31415 396 aa10.54□□□□□ -0.72
BBS4-210ENST00000566400 RFC4P35249 363 aa10.54□□□□□ -0.72
BBS4-210ENST00000566400 AFMP43652 599 aa10.54□□□□□ -0.72
BBS4-210ENST00000566400 E2F4Q16254 413 aa10.54□□□□□ -0.72
BBS4-210ENST00000566400 DTHD1Q6ZMT9 781 aa10.54□□□□□ -0.72
BBS4-210ENST00000566400 ZNF713Q8N859 430 aaPredicted RBP10.54□□□□□ -0.72
BBS4-210ENST00000566400 AK8Q96MA6 479 aa10.54□□□□□ -0.72
BBS4-210ENST00000566400 INTS13Q9NVM9 706 aa10.54□□□□□ -0.72
BBS4-210ENST00000566400 TFCP2L1Q9NZI6 479 aa10.54□□□□□ -0.72
BBS4-210ENST00000566400 ADD3Q9UEY8 706 aaKnown RBP10.54□□□□□ -0.72
BBS4-210ENST00000566400 MKRN1Q9UHC7 482 aaKnown RBP10.54□□□□□ -0.72
BBS4-210ENST00000566400 COL4A1P02462 1669 aa10.54□□□□□ -0.72
BBS4-210ENST00000566400 IRS2Q9Y4H2 1338 aa10.54□□□□□ -0.72
BBS4-210ENST00000566400 BAZ2AQ9UIF9 1905 aaKnown RBP10.54□□□□□ -0.72
BBS4-210ENST00000566400 H7C1D1 291 aa10.54□□□□□ -0.72
BBS4-210ENST00000566400 TM4SF1P30408 202 aa10.54□□□□□ -0.72
BBS4-210ENST00000566400 GABPB1Q06547 395 aaPredicted RBP10.54□□□□□ -0.72
BBS4-210ENST00000566400 PAK1Q13153 545 aa10.54□□□□□ -0.72
BBS4-210ENST00000566400 KCNB1Q14721 858 aa10.54□□□□□ -0.72
BBS4-210ENST00000566400 FAM47AQ5JRC9 791 aa10.54□□□□□ -0.72
BBS4-210ENST00000566400 TRAPPC3LQ5T215 181 aa10.54□□□□□ -0.72
BBS4-210ENST00000566400 RCSD1Q6JBY9 416 aa10.54□□□□□ -0.72
BBS4-210ENST00000566400 TRIM65Q6PJ69 517 aa10.54□□□□□ -0.72
BBS4-210ENST00000566400 USP49Q70CQ1 688 aa10.54□□□□□ -0.72
BBS4-210ENST00000566400 CREBRFQ8IUR6 639 aa10.54□□□□□ -0.72
BBS4-210ENST00000566400 IGSF22Q8N9C0 903 aa10.54□□□□□ -0.72
BBS4-210ENST00000566400 NOC3LQ8WTT2 800 aaKnown RBP10.54□□□□□ -0.72
BBS4-210ENST00000566400 SAMSN1Q9NSI8 373 aaKnown RBP10.54□□□□□ -0.72
BBS4-210ENST00000566400 LIMA1Q9UHB6 759 aaKnown RBP10.54□□□□□ -0.72
BBS4-210ENST00000566400 PPP1R3GB7ZBB8 358 aa10.53□□□□□ -0.72
BBS4-210ENST00000566400 ATP8B1O43520 1251 aa10.53□□□□□ -0.72
BBS4-210ENST00000566400 ATP2B4P23634 1241 aa10.53□□□□□ -0.72
BBS4-210ENST00000566400 GNA11P29992 359 aa10.53□□□□□ -0.72
BBS4-210ENST00000566400 MCM7P33993 719 aa10.53□□□□□ -0.72
BBS4-210ENST00000566400 BMS1Q14692 1282 aaKnown RBP10.53□□□□□ -0.72
BBS4-210ENST00000566400 EARS2Q5JPH6 523 aaKnown RBP10.53□□□□□ -0.72
BBS4-210ENST00000566400 WWC2Q6AWC2 1192 aa10.53□□□□□ -0.72
BBS4-210ENST00000566400 PDXDC2PQ6P474 469 aa10.53□□□□□ -0.72
BBS4-210ENST00000566400 TRMT44Q8IYL2 757 aaKnown RBP10.53□□□□□ -0.72
BBS4-210ENST00000566400 GRAMD1CQ8IYS0 662 aa10.53□□□□□ -0.72
BBS4-210ENST00000566400 KRT222Q8N1A0 295 aa10.53□□□□□ -0.72
BBS4-210ENST00000566400 TBC1D22AQ8WUA7 517 aa10.53□□□□□ -0.72
BBS4-210ENST00000566400 SHISA4Q96DD7 197 aa10.53□□□□□ -0.72
BBS4-210ENST00000566400 URI1O94763 535 aaPredicted RBP10.53□□□□□ -0.72
BBS4-210ENST00000566400 PBX1P40424 430 aa10.53□□□□□ -0.72
BBS4-210ENST00000566400 STAT6P42226 847 aa10.53□□□□□ -0.72
BBS4-210ENST00000566400 CBX1P83916 185 aa10.53□□□□□ -0.72
BBS4-210ENST00000566400 ELF2Q15723 593 aa10.53□□□□□ -0.72
BBS4-210ENST00000566400 ZNF827Q17R98 1081 aa10.53□□□□□ -0.72
BBS4-210ENST00000566400 JAKMIP3Q5VZ66 844 aa10.53□□□□□ -0.72
BBS4-210ENST00000566400 RRAGBQ5VZM2 374 aa10.53□□□□□ -0.72
BBS4-210ENST00000566400 KRT25Q7Z3Z0 450 aa10.53□□□□□ -0.72
BBS4-210ENST00000566400 TMC4Q7Z404 712 aa10.53□□□□□ -0.72
BBS4-210ENST00000566400 TMTC1Q8IUR5 882 aa10.53□□□□□ -0.72
BBS4-210ENST00000566400 SPZ1Q9BXG8 430 aa10.53□□□□□ -0.72
BBS4-210ENST00000566400 CCSER1Q9C0I3 900 aa10.53□□□□□ -0.72
BBS4-210ENST00000566400 BARHL2Q9NY43 387 aa10.53□□□□□ -0.72
BBS4-210ENST00000566400 MYO1AQ9UBC5 1043 aa10.53□□□□□ -0.72
BBS4-210ENST00000566400 TTF2Q9UNY4 1162 aaKnown RBP10.53□□□□□ -0.72
BBS4-210ENST00000566400 A0A087X0B3 334 aa10.52□□□□□ -0.73
BBS4-210ENST00000566400 FAM205CA6NFA0 338 aa10.52□□□□□ -0.73
BBS4-210ENST00000566400 RPN1P04843 607 aaKnown RBP10.52□□□□□ -0.73
BBS4-210ENST00000566400 FECHP22830 423 aa10.52□□□□□ -0.73
BBS4-210ENST00000566400 UBA7P41226 1012 aa10.52□□□□□ -0.73
BBS4-210ENST00000566400 GNG11P61952 73 aa10.52□□□□□ -0.73
BBS4-210ENST00000566400 AMPD3Q01432 767 aa10.52□□□□□ -0.73
BBS4-210ENST00000566400 KLHL10Q6JEL2 608 aa10.52□□□□□ -0.73
BBS4-210ENST00000566400 CNBD1Q8NA66 436 aa10.52□□□□□ -0.73
BBS4-210ENST00000566400 ARHGEF1Q92888 912 aaKnown RBP10.52□□□□□ -0.73
BBS4-210ENST00000566400 IQCDQ96DY2 449 aa10.52□□□□□ -0.73
BBS4-210ENST00000566400 GJD4Q96KN9 370 aaPredicted RBP10.52□□□□□ -0.73
BBS4-210ENST00000566400 C6orf50Q9HD87 102 aa10.52□□□□□ -0.73
BBS4-210ENST00000566400 DISC1Q9NRI5 854 aa10.52□□□□□ -0.73
BBS4-210ENST00000566400 BRWD3Q6RI45 1802 aa10.52□□□□□ -0.73
BBS4-210ENST00000566400 PALM3A6NDB9 673 aaPredicted RBP10.51□□□□□ -0.73
BBS4-210ENST00000566400 M0R2N6 131 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms