RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 CRACR2BQ8N4Y2 399 aaPredicted RBP19.43■□□□□ 0.7
RAB40C-210ENST00000566290 NASPP49321 788 aaPredicted RBP19.42■□□□□ 0.7
RAB40C-210ENST00000566290 FUT2Q10981 343 aa19.42■□□□□ 0.7
RAB40C-210ENST00000566290 TEPSINQ96N21 525 aa19.42■□□□□ 0.7
RAB40C-210ENST00000566290 DDX19AQ9NUU7 478 aaKnown RBP19.42■□□□□ 0.7
RAB40C-210ENST00000566290 BRCA2P51587 3418 aa19.42■□□□□ 0.7
RAB40C-210ENST00000566290 PRPF3O43395 683 aaKnown RBP19.41■□□□□ 0.7
RAB40C-210ENST00000566290 TRIM29Q14134 588 aa19.41■□□□□ 0.7
RAB40C-210ENST00000566290 TTLL12Q14166 644 aaPredicted RBP19.41■□□□□ 0.7
RAB40C-210ENST00000566290 MYSM1Q5VVJ2 828 aa19.41■□□□□ 0.7
RAB40C-210ENST00000566290 KRT40Q6A162 431 aa19.41■□□□□ 0.7
RAB40C-210ENST00000566290 RCSD1Q6JBY9 416 aa19.41■□□□□ 0.7
RAB40C-210ENST00000566290 GAS2L3Q86XJ1 694 aa19.41■□□□□ 0.7
RAB40C-210ENST00000566290 TGFBRAP1Q8WUH2 860 aa19.41■□□□□ 0.7
RAB40C-210ENST00000566290 TMEM39BQ9GZU3 492 aa19.41■□□□□ 0.7
RAB40C-210ENST00000566290 GREB1LQ9C091 1923 aaPredicted RBP19.41■□□□□ 0.7
RAB40C-210ENST00000566290 A0A1W2PQ27 194 aa19.4■□□□□ 0.7
RAB40C-210ENST00000566290 A0A1W2PQ64 194 aa19.4■□□□□ 0.7
RAB40C-210ENST00000566290 A0A1W2PQD8 194 aa19.4■□□□□ 0.7
RAB40C-210ENST00000566290 TSPY2A6NKD2 308 aa19.4■□□□□ 0.7
RAB40C-210ENST00000566290 CYP2D6P10635 497 aa19.4■□□□□ 0.7
RAB40C-210ENST00000566290 SREBF2Q12772 1141 aa19.4■□□□□ 0.7
RAB40C-210ENST00000566290 TMTC3Q6ZXV5 915 aa19.4■□□□□ 0.7
RAB40C-210ENST00000566290 KCNG4Q8TDN1 519 aa19.4■□□□□ 0.7
RAB40C-210ENST00000566290 PPP2R3BQ9Y5P8 575 aa19.4■□□□□ 0.7
RAB40C-210ENST00000566290 MYH6P13533 1939 aa19.39■□□□□ 0.7
RAB40C-210ENST00000566290 XRCC6P12956 609 aaKnown RBP eCLIP19.39■□□□□ 0.69
RAB40C-210ENST00000566290 RASA1P20936 1047 aa19.39■□□□□ 0.69
RAB40C-210ENST00000566290 KIF5BP33176 963 aa19.39■□□□□ 0.69
RAB40C-210ENST00000566290 FOXD4L6Q3SYB3 417 aaPredicted RBP19.39■□□□□ 0.69
RAB40C-210ENST00000566290 CDC42EP5Q6NZY7 148 aa19.39■□□□□ 0.69
RAB40C-210ENST00000566290 FOXD4L3Q6VB84 417 aaPredicted RBP19.39■□□□□ 0.69
RAB40C-210ENST00000566290 RBM43Q6ZSC3 357 aaKnown RBP19.39■□□□□ 0.69
RAB40C-210ENST00000566290 NEDD1Q8NHV4 660 aa19.39■□□□□ 0.69
RAB40C-210ENST00000566290 ZKSCAN3Q9BRR0 538 aa19.39■□□□□ 0.69
RAB40C-210ENST00000566290 EHD4Q9H223 541 aa19.39■□□□□ 0.69
RAB40C-210ENST00000566290 FOXP1Q9H334 677 aaPredicted RBP19.39■□□□□ 0.69
RAB40C-210ENST00000566290 RBBP6Q7Z6E9 1792 aaKnown RBP19.39■□□□□ 0.69
RAB40C-210ENST00000566290 SMIM22K7EJ46 135 aa19.38■□□□□ 0.69
RAB40C-210ENST00000566290 MMP1P03956 469 aa19.38■□□□□ 0.69
RAB40C-210ENST00000566290 POLR3DP05423 398 aaPredicted RBP19.38■□□□□ 0.69
RAB40C-210ENST00000566290 XBP1P17861 261 aa19.38■□□□□ 0.69
RAB40C-210ENST00000566290 NF2P35240 595 aa19.38■□□□□ 0.69
RAB40C-210ENST00000566290 GNAQP50148 359 aa19.38■□□□□ 0.69
RAB40C-210ENST00000566290 GABPAQ06546 454 aa19.38■□□□□ 0.69
RAB40C-210ENST00000566290 NFIAQ12857 509 aa19.38■□□□□ 0.69
RAB40C-210ENST00000566290 PPP4R3BQ5MIZ7 849 aa19.38■□□□□ 0.69
RAB40C-210ENST00000566290 FAM173BQ6P4H8 233 aa19.38■□□□□ 0.69
RAB40C-210ENST00000566290 CTCFLQ8NI51 663 aaPredicted RBP19.38■□□□□ 0.69
RAB40C-210ENST00000566290 OTUD5Q96G74 571 aa19.38■□□□□ 0.69
RAB40C-210ENST00000566290 USP28Q96RU2 1077 aa19.38■□□□□ 0.69
RAB40C-210ENST00000566290 MYL10Q9BUA6 226 aa19.38■□□□□ 0.69
RAB40C-210ENST00000566290 SLC26A6Q9BXS9 759 aa19.38■□□□□ 0.69
RAB40C-210ENST00000566290 SWAP70Q9UH65 585 aa19.38■□□□□ 0.69
RAB40C-210ENST00000566290 PTPN22Q9Y2R2 807 aa19.38■□□□□ 0.69
RAB40C-210ENST00000566290 GOLGA6L4A6NEF3 574 aa19.37■□□□□ 0.69
RAB40C-210ENST00000566290 DTNBO60941 627 aa19.37■□□□□ 0.69
RAB40C-210ENST00000566290 PRDM1O75626 825 aa19.37■□□□□ 0.69
RAB40C-210ENST00000566290 WDHD1O75717 1129 aaPredicted RBP19.37■□□□□ 0.69
RAB40C-210ENST00000566290 SMARCA1P28370 1054 aa19.37■□□□□ 0.69
RAB40C-210ENST00000566290 LDLRAD1Q5T700 205 aa19.37■□□□□ 0.69
RAB40C-210ENST00000566290 SLC17A8Q8NDX2 589 aa19.37■□□□□ 0.69
RAB40C-210ENST00000566290 PHKBQ93100 1093 aa19.37■□□□□ 0.69
RAB40C-210ENST00000566290 LZTS2Q9BRK4 669 aa19.37■□□□□ 0.69
RAB40C-210ENST00000566290 IDI2Q9BXS1 227 aa19.37■□□□□ 0.69
RAB40C-210ENST00000566290 CNTNAP5Q8WYK1 1306 aa19.36■□□□□ 0.69
RAB40C-210ENST00000566290 H0YGN5 161 aa19.36■□□□□ 0.69
RAB40C-210ENST00000566290 USP2O75604 605 aaPredicted RBP19.36■□□□□ 0.69
RAB40C-210ENST00000566290 RXRAP19793 462 aa19.36■□□□□ 0.69
RAB40C-210ENST00000566290 TFAP4Q01664 338 aa19.36■□□□□ 0.69
RAB40C-210ENST00000566290 TNFAIP1Q13829 316 aa19.36■□□□□ 0.69
RAB40C-210ENST00000566290 SAFBQ15424 915 aaKnown RBP eCLIP19.36■□□□□ 0.69
RAB40C-210ENST00000566290 RAB11FIP4Q86YS3 637 aa19.36■□□□□ 0.69
RAB40C-210ENST00000566290 MAPKAPK5Q8IW41 473 aa19.36■□□□□ 0.69
RAB40C-210ENST00000566290 ZNF444Q8N0Y2 327 aaPredicted RBP19.36■□□□□ 0.69
RAB40C-210ENST00000566290 LINC00301Q8NCQ3 95 aa19.36■□□□□ 0.69
RAB40C-210ENST00000566290 ARMC5Q96C12 935 aa19.36■□□□□ 0.69
RAB40C-210ENST00000566290 CLMNQ96JQ2 1002 aa19.36■□□□□ 0.69
RAB40C-210ENST00000566290 PGBD1Q96JS3 809 aa19.36■□□□□ 0.69
RAB40C-210ENST00000566290 MKNK2Q9HBH9 465 aa19.36■□□□□ 0.69
RAB40C-210ENST00000566290 SYCE3A1L190 88 aa19.35■□□□□ 0.69
RAB40C-210ENST00000566290 CDK8P49336 464 aa19.35■□□□□ 0.69
RAB40C-210ENST00000566290 GRM4Q14833 912 aa19.35■□□□□ 0.69
RAB40C-210ENST00000566290 MAP3K11Q16584 847 aa19.35■□□□□ 0.69
RAB40C-210ENST00000566290 SUPT20HL1Q3ZLR7 823 aa19.35■□□□□ 0.69
RAB40C-210ENST00000566290 ADALQ6DHV7 355 aa19.35■□□□□ 0.69
RAB40C-210ENST00000566290 ARMC9Q7Z3E5 817 aa19.35■□□□□ 0.69
RAB40C-210ENST00000566290 ZFPM1Q8IX07 1006 aa19.35■□□□□ 0.69
RAB40C-210ENST00000566290 DHX36Q9H2U1 1008 aaKnown RBP19.35■□□□□ 0.69
RAB40C-210ENST00000566290 KAT14Q9H8E8 782 aa19.35■□□□□ 0.69
RAB40C-210ENST00000566290 IL17RBQ9NRM6 502 aa19.35■□□□□ 0.69
RAB40C-210ENST00000566290 USP40Q9NVE5 1235 aa19.35■□□□□ 0.69
RAB40C-210ENST00000566290 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.35■□□□□ 0.69
RAB40C-210ENST00000566290 TFIP11Q9UBB9 837 aaKnown RBP19.35■□□□□ 0.69
RAB40C-210ENST00000566290 FAM198AQ9UFP1 575 aa19.35■□□□□ 0.69
RAB40C-210ENST00000566290 MYH8P13535 1937 aa19.35■□□□□ 0.69
RAB40C-210ENST00000566290 KIF28PB7ZC32 967 aa19.34■□□□□ 0.69
RAB40C-210ENST00000566290 CTAGE5O15320 804 aa19.34■□□□□ 0.69
RAB40C-210ENST00000566290 PPP6R2O75170 966 aa19.34■□□□□ 0.69
RAB40C-210ENST00000566290 TSPY3P0CV98 308 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms