RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 POTEEQ6S8J3 1075 aa24.77■■□□□ 1.56
SHCBP1-205ENST00000566016 ENAHQ8N8S7 591 aaPredicted RBP24.77■■□□□ 1.56
SHCBP1-205ENST00000566016 MB21D2Q8IYB1 491 aaPredicted RBP24.77■■□□□ 1.56
SHCBP1-205ENST00000566016 GPRC5AQ8NFJ5 357 aa24.77■■□□□ 1.56
SHCBP1-205ENST00000566016 ZKSCAN3Q9BRR0 538 aa24.77■■□□□ 1.56
SHCBP1-205ENST00000566016 TXNRD2Q9NNW7 524 aa24.77■■□□□ 1.56
SHCBP1-205ENST00000566016 PPP1R9AQ9ULJ8 1098 aa24.77■■□□□ 1.56
SHCBP1-205ENST00000566016 ADAMTS5Q9UNA0 930 aa24.77■■□□□ 1.56
SHCBP1-205ENST00000566016 BMP3P12645 472 aa24.76■■□□□ 1.55
SHCBP1-205ENST00000566016 SLC1A4P43007 532 aa24.76■■□□□ 1.55
SHCBP1-205ENST00000566016 ERVK-9P63128 1117 aa24.76■■□□□ 1.55
SHCBP1-205ENST00000566016 ERVK-24P63145 666 aa24.76■■□□□ 1.55
SHCBP1-205ENST00000566016 CAP1Q01518 475 aa24.76■■□□□ 1.55
SHCBP1-205ENST00000566016 CYB5R4Q7L1T6 521 aa24.76■■□□□ 1.55
SHCBP1-205ENST00000566016 OTOP1Q7RTM1 612 aa24.76■■□□□ 1.55
SHCBP1-205ENST00000566016 DCAF4Q8WV16 495 aa24.76■■□□□ 1.55
SHCBP1-205ENST00000566016 NUP88Q99567 741 aaPredicted RBP24.76■■□□□ 1.55
SHCBP1-205ENST00000566016 MTA3Q9BTC8 594 aa24.76■■□□□ 1.55
SHCBP1-205ENST00000566016 EFCC1Q9HA90 598 aa24.76■■□□□ 1.55
SHCBP1-205ENST00000566016 ZKSCAN1P17029 563 aaPredicted RBP24.75■■□□□ 1.55
SHCBP1-205ENST00000566016 FCGRTP55899 365 aa24.75■■□□□ 1.55
SHCBP1-205ENST00000566016 KCNB2Q92953 911 aa24.75■■□□□ 1.55
SHCBP1-205ENST00000566016 SLF1Q9BQI6 1058 aa24.75■■□□□ 1.55
SHCBP1-205ENST00000566016 FEM1BQ9UK73 627 aa24.75■■□□□ 1.55
SHCBP1-205ENST00000566016 PLA2G6O60733 806 aa24.74■■□□□ 1.55
SHCBP1-205ENST00000566016 HSPA4P34932 840 aa24.74■■□□□ 1.55
SHCBP1-205ENST00000566016 PSMC4P43686 418 aa24.74■■□□□ 1.55
SHCBP1-205ENST00000566016 SART3Q15020 963 aaKnown RBP24.74■■□□□ 1.55
SHCBP1-205ENST00000566016 SEC23AQ15436 765 aa24.74■■□□□ 1.55
SHCBP1-205ENST00000566016 TRIM47Q96LD4 638 aa24.74■■□□□ 1.55
SHCBP1-205ENST00000566016 ARHGAP39Q9C0H5 1083 aa24.74■■□□□ 1.55
SHCBP1-205ENST00000566016 FBXO28Q9NVF7 368 aa24.74■■□□□ 1.55
SHCBP1-205ENST00000566016 EIF5BO60841 1220 aaKnown RBP24.73■■□□□ 1.55
SHCBP1-205ENST00000566016 CNMDO75829 334 aa24.73■■□□□ 1.55
SHCBP1-205ENST00000566016 SNHG28P0DPA3 235 aa24.73■■□□□ 1.55
SHCBP1-205ENST00000566016 MCCP23508 829 aa24.73■■□□□ 1.55
SHCBP1-205ENST00000566016 CTGFP29279 349 aa24.73■■□□□ 1.55
SHCBP1-205ENST00000566016 KRT32Q14532 448 aa24.73■■□□□ 1.55
SHCBP1-205ENST00000566016 PRPF38AQ8NAV1 312 aaKnown RBP24.73■■□□□ 1.55
SHCBP1-205ENST00000566016 ATG4CQ96DT6 458 aa24.73■■□□□ 1.55
SHCBP1-205ENST00000566016 PAGR1Q9BTK6 254 aa24.73■■□□□ 1.55
SHCBP1-205ENST00000566016 TRIM17Q9Y577 477 aa24.73■■□□□ 1.55
SHCBP1-205ENST00000566016 PDHBP11177 359 aa24.72■■□□□ 1.55
SHCBP1-205ENST00000566016 STAT2P52630 851 aa24.72■■□□□ 1.55
SHCBP1-205ENST00000566016 PRMT2P55345 433 aa24.72■■□□□ 1.55
SHCBP1-205ENST00000566016 CCNA1P78396 465 aa24.72■■□□□ 1.55
SHCBP1-205ENST00000566016 PNMA1Q8ND90 353 aa24.72■■□□□ 1.55
SHCBP1-205ENST00000566016 KAT14Q9H8E8 782 aa24.72■■□□□ 1.55
SHCBP1-205ENST00000566016 BTBD7Q9P203 1132 aa24.72■■□□□ 1.55
SHCBP1-205ENST00000566016 CENPFP49454 3210 aa24.71■■□□□ 1.55
SHCBP1-205ENST00000566016 VWA5AO00534 786 aa24.71■■□□□ 1.55
SHCBP1-205ENST00000566016 MCM5P33992 734 aa24.71■■□□□ 1.55
SHCBP1-205ENST00000566016 ANTXR2P58335 489 aa24.71■■□□□ 1.55
SHCBP1-205ENST00000566016 IFIT1BQ5T764 474 aaKnown RBP24.71■■□□□ 1.55
SHCBP1-205ENST00000566016 FAM160B2Q86V87 743 aa24.71■■□□□ 1.55
SHCBP1-205ENST00000566016 CHURC1Q8WUH1 139 aa24.71■■□□□ 1.55
SHCBP1-205ENST00000566016 PLXNB2O15031 1838 aa24.71■■□□□ 1.55
SHCBP1-205ENST00000566016 ERICH2A1L162 156 aa24.7■■□□□ 1.55
SHCBP1-205ENST00000566016 FDX1P10109 184 aa24.7■■□□□ 1.55
SHCBP1-205ENST00000566016 MAPK4P31152 587 aa24.7■■□□□ 1.55
SHCBP1-205ENST00000566016 RASEFQ8IZ41 740 aa24.7■■□□□ 1.55
SHCBP1-205ENST00000566016 MCOLN1Q9GZU1 580 aa24.7■■□□□ 1.55
SHCBP1-205ENST00000566016 IFIT3O14879 490 aaKnown RBP24.7■■□□□ 1.54
SHCBP1-205ENST00000566016 FMNL1O95466 1100 aaPredicted RBP24.7■■□□□ 1.54
SHCBP1-205ENST00000566016 HOXD10P28358 340 aa24.7■■□□□ 1.54
SHCBP1-205ENST00000566016 Q3C1V9 767 aa24.7■■□□□ 1.54
SHCBP1-205ENST00000566016 FBXO46Q6PJ61 603 aaPredicted RBP24.7■■□□□ 1.54
SHCBP1-205ENST00000566016 REPS2Q8NFH8 660 aa24.7■■□□□ 1.54
SHCBP1-205ENST00000566016 SPATC1LQ9H0A9 340 aa24.7■■□□□ 1.54
SHCBP1-205ENST00000566016 WDR19Q8NEZ3 1342 aa24.7■■□□□ 1.54
SHCBP1-205ENST00000566016 ZNF236Q9UL36 1845 aa24.69■■□□□ 1.54
SHCBP1-205ENST00000566016 TMEM232C9JQI7 657 aa24.69■■□□□ 1.54
SHCBP1-205ENST00000566016 TNPO2O14787 897 aaKnown RBP24.69■■□□□ 1.54
SHCBP1-205ENST00000566016 PEX10O60683 326 aa24.69■■□□□ 1.54
SHCBP1-205ENST00000566016 GPATCH4Q5T3I0 446 aaKnown RBP24.69■■□□□ 1.54
SHCBP1-205ENST00000566016 RASGRP2Q7LDG7 609 aa24.69■■□□□ 1.54
SHCBP1-205ENST00000566016 TMEM87BQ96K49 555 aa24.69■■□□□ 1.54
SHCBP1-205ENST00000566016 USP26Q9BXU7 913 aa24.69■■□□□ 1.54
SHCBP1-205ENST00000566016 SRRDQ9UH36 339 aa24.69■■□□□ 1.54
SHCBP1-205ENST00000566016 ZNF214Q9UL59 606 aaPredicted RBP24.69■■□□□ 1.54
SHCBP1-205ENST00000566016 ATP2A1O14983 1001 aa24.68■■□□□ 1.54
SHCBP1-205ENST00000566016 PRC1O43663 620 aa24.68■■□□□ 1.54
SHCBP1-205ENST00000566016 ZNF543Q08ER8 600 aa24.68■■□□□ 1.54
SHCBP1-205ENST00000566016 CCDC96Q2M329 555 aa24.68■■□□□ 1.54
SHCBP1-205ENST00000566016 BTNL9Q6UXG8 535 aa24.68■■□□□ 1.54
SHCBP1-205ENST00000566016 KCTD1Q719H9 257 aa24.68■■□□□ 1.54
SHCBP1-205ENST00000566016 SHCBP1Q8NEM2 672 aa24.68■■□□□ 1.54
SHCBP1-205ENST00000566016 IGDCC4Q8TDY8 1250 aa24.68■■□□□ 1.54
SHCBP1-205ENST00000566016 COA7Q96BR5 231 aa24.68■■□□□ 1.54
SHCBP1-205ENST00000566016 NEK1Q96PY6 1258 aa24.68■■□□□ 1.54
SHCBP1-205ENST00000566016 PORCNQ9H237 461 aa24.68■■□□□ 1.54
SHCBP1-205ENST00000566016 SLC38A10Q9HBR0 1119 aa24.68■■□□□ 1.54
SHCBP1-205ENST00000566016 PTPN22Q9Y2R2 807 aa24.68■■□□□ 1.54
SHCBP1-205ENST00000566016 GTF3C3Q9Y5Q9 886 aa24.68■■□□□ 1.54
SHCBP1-205ENST00000566016 HMGB1P09429 215 aaKnown RBP24.67■■□□□ 1.54
SHCBP1-205ENST00000566016 TMEM132BQ14DG7 1078 aa24.67■■□□□ 1.54
SHCBP1-205ENST00000566016 WTAPQ15007 396 aa24.67■■□□□ 1.54
SHCBP1-205ENST00000566016 TMEM67Q5HYA8 995 aa24.67■■□□□ 1.54
SHCBP1-205ENST00000566016 TNS4Q8IZW8 715 aa24.67■■□□□ 1.54
SHCBP1-205ENST00000566016 KIFC2Q96AC6 838 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms