RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 FAM43AQ8N2R8 423 aa14.75□□□□□ -0.05
SF3B3-206ENST00000565990 ADAMTS5Q9UNA0 930 aa14.75□□□□□ -0.05
SF3B3-206ENST00000565990 PALM3A6NDB9 673 aaPredicted RBP14.74□□□□□ -0.05
SF3B3-206ENST00000565990 CCDC69A6NI79 296 aa14.74□□□□□ -0.05
SF3B3-206ENST00000565990 USP17L15C9J2P7 530 aa14.74□□□□□ -0.05
SF3B3-206ENST00000565990 USP17L13C9JLJ4 530 aa14.74□□□□□ -0.05
SF3B3-206ENST00000565990 USP17L11C9JVI0 530 aa14.74□□□□□ -0.05
SF3B3-206ENST00000565990 USP17L18D6R9N7 530 aa14.74□□□□□ -0.05
SF3B3-206ENST00000565990 USP17L22D6RA61 530 aa14.74□□□□□ -0.05
SF3B3-206ENST00000565990 USP17L17D6RBQ6 530 aa14.74□□□□□ -0.05
SF3B3-206ENST00000565990 USP17L19D6RCP7 530 aa14.74□□□□□ -0.05
SF3B3-206ENST00000565990 USP17L20D6RJB6 530 aa14.74□□□□□ -0.05
SF3B3-206ENST00000565990 IGF2BP3O00425 579 aaKnown RBP eCLIP14.74□□□□□ -0.053e-6■■■□□ 18.9
SF3B3-206ENST00000565990 CALM1P0DP23 149 aa14.74□□□□□ -0.05
SF3B3-206ENST00000565990 CALM2P0DP24 149 aa14.74□□□□□ -0.05
SF3B3-206ENST00000565990 CALM3P0DP25 149 aa14.74□□□□□ -0.05
SF3B3-206ENST00000565990 BMP3P12645 472 aa14.74□□□□□ -0.05
SF3B3-206ENST00000565990 RCAN1P53805 252 aa14.74□□□□□ -0.05
SF3B3-206ENST00000565990 USP17L24Q0WX57 530 aa14.74□□□□□ -0.05
SF3B3-206ENST00000565990 ANKRD1Q15327 319 aa14.74□□□□□ -0.05
SF3B3-206ENST00000565990 BTNL9Q6UXG8 535 aa14.74□□□□□ -0.05
SF3B3-206ENST00000565990 CATIPQ7Z7H3 387 aa14.74□□□□□ -0.05
SF3B3-206ENST00000565990 ZNF654Q8IZM8 581 aa14.74□□□□□ -0.05
SF3B3-206ENST00000565990 SPICE1Q8N0Z3 855 aa14.74□□□□□ -0.05
SF3B3-206ENST00000565990 BRF1Q92994 677 aa14.74□□□□□ -0.05
SF3B3-206ENST00000565990 ZNF274Q96GC6 653 aaPredicted RBP14.74□□□□□ -0.05
SF3B3-206ENST00000565990 SLC12A7Q9Y666 1083 aa14.74□□□□□ -0.05
SF3B3-206ENST00000565990 PDHXO00330 501 aa14.73□□□□□ -0.05
SF3B3-206ENST00000565990 DDAH1O94760 285 aa14.73□□□□□ -0.05
SF3B3-206ENST00000565990 SMARCA1P28370 1054 aa14.73□□□□□ -0.05
SF3B3-206ENST00000565990 SLC1A4P43007 532 aa14.73□□□□□ -0.05
SF3B3-206ENST00000565990 ZNF543Q08ER8 600 aa14.73□□□□□ -0.05
SF3B3-206ENST00000565990 GRM1Q13255 1194 aa14.73□□□□□ -0.05
SF3B3-206ENST00000565990 PABPC4Q13310 644 aaKnown RBP eCLIP14.73□□□□□ -0.055e-11■□□□□ 9.2
SF3B3-206ENST00000565990 COG2Q14746 738 aa14.73□□□□□ -0.05
SF3B3-206ENST00000565990 GRM4Q14833 912 aa14.73□□□□□ -0.05
SF3B3-206ENST00000565990 PPP2R5BQ15173 497 aa14.73□□□□□ -0.05
SF3B3-206ENST00000565990 OTUD7BQ6GQQ9 843 aa14.73□□□□□ -0.05
SF3B3-206ENST00000565990 APOA5Q6Q788 366 aa14.73□□□□□ -0.05
SF3B3-206ENST00000565990 NFXL1Q6ZNB6 911 aa14.73□□□□□ -0.05
SF3B3-206ENST00000565990 GADL1Q6ZQY3 521 aa14.73□□□□□ -0.05
SF3B3-206ENST00000565990 FANCBQ8NB91 859 aa14.73□□□□□ -0.05
SF3B3-206ENST00000565990 CFHR5Q9BXR6 569 aa14.73□□□□□ -0.05
SF3B3-206ENST00000565990 RPAP3Q9H6T3 665 aaPredicted RBP14.73□□□□□ -0.05
SF3B3-206ENST00000565990 ALDH1A1P00352 501 aa14.72□□□□□ -0.05
SF3B3-206ENST00000565990 OSBPP22059 807 aa14.72□□□□□ -0.05
SF3B3-206ENST00000565990 PDIA3P30101 505 aaKnown RBP14.72□□□□□ -0.05
SF3B3-206ENST00000565990 AK2P54819 239 aa14.72□□□□□ -0.05
SF3B3-206ENST00000565990 FGD1P98174 961 aa14.72□□□□□ -0.05
SF3B3-206ENST00000565990 APOBRQ0VD83 1088 aa14.72□□□□□ -0.05
SF3B3-206ENST00000565990 ASPRV1Q53RT3 343 aa14.72□□□□□ -0.05
SF3B3-206ENST00000565990 FAM83BQ5T0W9 1011 aa14.72□□□□□ -0.05
SF3B3-206ENST00000565990 GPATCH4Q5T3I0 446 aaKnown RBP14.72□□□□□ -0.05
SF3B3-206ENST00000565990 POTEEQ6S8J3 1075 aa14.72□□□□□ -0.05
SF3B3-206ENST00000565990 LBX2Q6XYB7 198 aa14.72□□□□□ -0.05
SF3B3-206ENST00000565990 CHURC1Q8WUH1 139 aa14.72□□□□□ -0.05
SF3B3-206ENST00000565990 SNX21Q969T3 373 aa14.72□□□□□ -0.05
SF3B3-206ENST00000565990 NUP88Q99567 741 aaPredicted RBP14.72□□□□□ -0.05
SF3B3-206ENST00000565990 ASCC2Q9H1I8 757 aaPredicted RBP14.72□□□□□ -0.05
SF3B3-206ENST00000565990 FAM217BQ9NTX9 383 aaPredicted RBP14.72□□□□□ -0.05
SF3B3-206ENST00000565990 HOXC10Q9NYD6 342 aa14.72□□□□□ -0.05
SF3B3-206ENST00000565990 MAD2L2Q9UI95 211 aa14.72□□□□□ -0.05
SF3B3-206ENST00000565990 FEM1BQ9UK73 627 aa14.72□□□□□ -0.05
SF3B3-206ENST00000565990 HPS5Q9UPZ3 1129 aa14.72□□□□□ -0.05
SF3B3-206ENST00000565990 MYPNQ86TC9 1320 aa14.71□□□□□ -0.05
SF3B3-206ENST00000565990 CEP350Q5VT06 3117 aa14.71□□□□□ -0.05
SF3B3-206ENST00000565990 KLF18A0A0U1RQI7 1052 aa14.71□□□□□ -0.05
SF3B3-206ENST00000565990 ZBTB43O43298 467 aa14.71□□□□□ -0.05
SF3B3-206ENST00000565990 PARP1P09874 1014 aaKnown RBP14.71□□□□□ -0.05
SF3B3-206ENST00000565990 SYNE3Q6ZMZ3 975 aa14.71□□□□□ -0.05
SF3B3-206ENST00000565990 JMYQ8N9B5 988 aa14.71□□□□□ -0.05
SF3B3-206ENST00000565990 PRPF38AQ8NAV1 312 aaKnown RBP14.71□□□□□ -0.05
SF3B3-206ENST00000565990 P2RX7Q99572 595 aaKnown RBP14.71□□□□□ -0.05
SF3B3-206ENST00000565990 TPCN1Q9ULQ1 816 aa14.71□□□□□ -0.05
SF3B3-206ENST00000565990 NID2Q14112 1375 aa14.71□□□□□ -0.06
SF3B3-206ENST00000565990 TMEM232C9JQI7 657 aa14.7□□□□□ -0.06
SF3B3-206ENST00000565990 PTMSP20962 102 aa14.7□□□□□ -0.06
SF3B3-206ENST00000565990 DSG3P32926 999 aa14.7□□□□□ -0.06
SF3B3-206ENST00000565990 TTBK2Q6IQ55 1244 aa14.7□□□□□ -0.06
SF3B3-206ENST00000565990 KCTD1Q719H9 257 aa14.7□□□□□ -0.06
SF3B3-206ENST00000565990 RASGRP2Q7LDG7 609 aa14.7□□□□□ -0.06
SF3B3-206ENST00000565990 FAM160B2Q86V87 743 aa14.7□□□□□ -0.06
SF3B3-206ENST00000565990 STAG2Q8N3U4 1231 aa14.7□□□□□ -0.06
SF3B3-206ENST00000565990 MYL10Q9BUA6 226 aa14.7□□□□□ -0.06
SF3B3-206ENST00000565990 RNF186Q9NXI6 227 aa14.7□□□□□ -0.06
SF3B3-206ENST00000565990 PNMA3Q9UL41 463 aa14.7□□□□□ -0.06
SF3B3-206ENST00000565990 PPP1R9AQ9ULJ8 1098 aa14.7□□□□□ -0.06
SF3B3-206ENST00000565990 CIZ1Q9ULV3 898 aaPredicted RBP14.7□□□□□ -0.06
SF3B3-206ENST00000565990 LIMCH1Q9UPQ0 1083 aa14.7□□□□□ -0.06
SF3B3-206ENST00000565990 COL11A1P12107 1806 aaPredicted RBP14.69□□□□□ -0.06
SF3B3-206ENST00000565990 PCNTO95613 3336 aa14.69□□□□□ -0.06
SF3B3-206ENST00000565990 CA12O43570 354 aa14.69□□□□□ -0.06
SF3B3-206ENST00000565990 RAD21O60216 631 aa14.69□□□□□ -0.06
SF3B3-206ENST00000565990 ST18O60284 1047 aa14.69□□□□□ -0.06
SF3B3-206ENST00000565990 GOLGA8HP0CJ92 632 aa14.69□□□□□ -0.06
SF3B3-206ENST00000565990 FDX1P10109 184 aa14.69□□□□□ -0.06
SF3B3-206ENST00000565990 KIF5BP33176 963 aa14.69□□□□□ -0.06
SF3B3-206ENST00000565990 STAT2P52630 851 aa14.69□□□□□ -0.06
SF3B3-206ENST00000565990 MAP2K1Q02750 393 aaPredicted RBP14.69□□□□□ -0.06
SF3B3-206ENST00000565990 CTCFLQ8NI51 663 aaPredicted RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms