RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 OTOFQ9HC10 1997 aa21.71■■□□□ 1.07
COMMD4-213ENST00000565834 NDUFB10O96000 172 aa21.71■■□□□ 1.07
COMMD4-213ENST00000565834 F13A1P00488 732 aa21.71■■□□□ 1.07
COMMD4-213ENST00000565834 SMARCA1P28370 1054 aa21.71■■□□□ 1.07
COMMD4-213ENST00000565834 CCDC84Q86UT8 332 aaPredicted RBP21.71■■□□□ 1.07
COMMD4-213ENST00000565834 ZKSCAN4Q969J2 545 aaPredicted RBP21.71■■□□□ 1.07
COMMD4-213ENST00000565834 GPCPD1Q9NPB8 672 aa21.71■■□□□ 1.07
COMMD4-213ENST00000565834 ISY1Q9ULR0 285 aaKnown RBP21.71■■□□□ 1.07
COMMD4-213ENST00000565834 hCG_1642624A0A1W2PR95 340 aa21.7■■□□□ 1.06
COMMD4-213ENST00000565834 USP2O75604 605 aaPredicted RBP21.7■■□□□ 1.06
COMMD4-213ENST00000565834 POTEIP0CG38 1075 aa21.7■■□□□ 1.06
COMMD4-213ENST00000565834 POTEJP0CG39 1038 aa21.7■■□□□ 1.06
COMMD4-213ENST00000565834 GUCY1B3Q02153 619 aa21.7■■□□□ 1.06
COMMD4-213ENST00000565834 TRIM29Q14134 588 aa21.7■■□□□ 1.06
COMMD4-213ENST00000565834 RGS22Q8NE09 1264 aa21.7■■□□□ 1.06
COMMD4-213ENST00000565834 FBXO18Q8NFZ0 1043 aa21.7■■□□□ 1.06
COMMD4-213ENST00000565834 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.7■■□□□ 1.06
COMMD4-213ENST00000565834 GMCL1Q96IK5 515 aa21.7■■□□□ 1.06
COMMD4-213ENST00000565834 PAPPA2Q9BXP8 1791 aa21.7■■□□□ 1.06
COMMD4-213ENST00000565834 PKN1Q16512 942 aa21.69■■□□□ 1.06
COMMD4-213ENST00000565834 SLC35G1Q2M3R5 365 aa21.69■■□□□ 1.06
COMMD4-213ENST00000565834 NOL9Q5SY16 702 aaKnown RBP21.69■■□□□ 1.06
COMMD4-213ENST00000565834 KCTD1Q719H9 257 aa21.69■■□□□ 1.06
COMMD4-213ENST00000565834 FEZ1Q99689 392 aa21.69■■□□□ 1.06
COMMD4-213ENST00000565834 PHIPQ8WWQ0 1821 aa21.69■■□□□ 1.06
COMMD4-213ENST00000565834 CYTH3O43739 400 aa21.69■■□□□ 1.06
COMMD4-213ENST00000565834 OTUD7BQ6GQQ9 843 aa21.69■■□□□ 1.06
COMMD4-213ENST00000565834 PIBF1Q8WXW3 757 aa21.69■■□□□ 1.06
COMMD4-213ENST00000565834 UBA5Q9GZZ9 404 aa21.69■■□□□ 1.06
COMMD4-213ENST00000565834 CPVLQ9H3G5 476 aa21.69■■□□□ 1.06
COMMD4-213ENST00000565834 VCPKMTQ9H867 229 aa21.69■■□□□ 1.06
COMMD4-213ENST00000565834 IREB2P48200 963 aaKnown RBP21.68■■□□□ 1.06
COMMD4-213ENST00000565834 MAP1SQ66K74 1059 aaPredicted RBP21.68■■□□□ 1.06
COMMD4-213ENST00000565834 KRT40Q6A162 431 aa21.68■■□□□ 1.06
COMMD4-213ENST00000565834 FERMT3Q86UX7 667 aa21.68■■□□□ 1.06
COMMD4-213ENST00000565834 LDHDQ86WU2 507 aa21.68■■□□□ 1.06
COMMD4-213ENST00000565834 ZNF526Q8TF50 670 aaPredicted RBP21.68■■□□□ 1.06
COMMD4-213ENST00000565834 GBP4Q96PP9 640 aa21.68■■□□□ 1.06
COMMD4-213ENST00000565834 AS3MTQ9HBK9 375 aa21.68■■□□□ 1.06
COMMD4-213ENST00000565834 NMRK2Q9NPI5 230 aa21.68■■□□□ 1.06
COMMD4-213ENST00000565834 GJB4Q9NTQ9 266 aa21.68■■□□□ 1.06
COMMD4-213ENST00000565834 ATP6V1DQ9Y5K8 247 aa21.68■■□□□ 1.06
COMMD4-213ENST00000565834 BMP3P12645 472 aa21.67■■□□□ 1.06
COMMD4-213ENST00000565834 SCG2P13521 617 aa21.67■■□□□ 1.06
COMMD4-213ENST00000565834 XBP1P17861 261 aa21.67■■□□□ 1.06
COMMD4-213ENST00000565834 PTPRAP18433 802 aa21.67■■□□□ 1.06
COMMD4-213ENST00000565834 MAP3K9P80192 1104 aa21.67■■□□□ 1.06
COMMD4-213ENST00000565834 ZYXQ15942 572 aaKnown RBP21.67■■□□□ 1.06
COMMD4-213ENST00000565834 PFKFB3Q16875 520 aaPredicted RBP21.67■■□□□ 1.06
COMMD4-213ENST00000565834 MCTP1Q6DN14 999 aa21.67■■□□□ 1.06
COMMD4-213ENST00000565834 SPICE1Q8N0Z3 855 aa21.67■■□□□ 1.06
COMMD4-213ENST00000565834 RRP36Q96EU6 259 aaKnown RBP21.67■■□□□ 1.06
COMMD4-213ENST00000565834 RIOX1Q9H6W3 641 aa21.67■■□□□ 1.06
COMMD4-213ENST00000565834 TTBK2Q6IQ55 1244 aa21.66■■□□□ 1.06
COMMD4-213ENST00000565834 NUP88Q99567 741 aaPredicted RBP21.66■■□□□ 1.06
COMMD4-213ENST00000565834 WDR18Q9BV38 432 aa21.66■■□□□ 1.06
COMMD4-213ENST00000565834 KIAA1683Q9H0B3 1180 aa21.66■■□□□ 1.06
COMMD4-213ENST00000565834 VAT1LQ9HCJ6 419 aa21.66■■□□□ 1.06
COMMD4-213ENST00000565834 TTLL12Q14166 644 aaPredicted RBP21.66■■□□□ 1.06
COMMD4-213ENST00000565834 CLEC17AQ6ZS10 378 aa21.66■■□□□ 1.06
COMMD4-213ENST00000565834 SEC63Q9UGP8 760 aaKnown RBP21.66■■□□□ 1.06
COMMD4-213ENST00000565834 CSADQ9Y600 493 aa21.66■■□□□ 1.06
COMMD4-213ENST00000565834 TCHHQ07283 1943 aa21.65■■□□□ 1.06
COMMD4-213ENST00000565834 MYH15Q9Y2K3 1946 aa21.65■■□□□ 1.06
COMMD4-213ENST00000565834 SLC16A2P36021 539 aa21.65■■□□□ 1.06
COMMD4-213ENST00000565834 VGLL4Q14135 290 aa21.65■■□□□ 1.06
COMMD4-213ENST00000565834 KIAA1755Q5JYT7 1200 aa21.65■■□□□ 1.06
COMMD4-213ENST00000565834 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.65■■□□□ 1.06
COMMD4-213ENST00000565834 HOMER1Q86YM7 354 aa21.65■■□□□ 1.06
COMMD4-213ENST00000565834 ZSCAN16Q9H4T2 348 aaPredicted RBP21.65■■□□□ 1.06
COMMD4-213ENST00000565834 VPS54Q9P1Q0 977 aa21.65■■□□□ 1.06
COMMD4-213ENST00000565834 USP17L10C9JJH3 530 aa21.64■■□□□ 1.05
COMMD4-213ENST00000565834 BAG4O95429 457 aaKnown RBP21.64■■□□□ 1.05
COMMD4-213ENST00000565834 RESTQ13127 1097 aa21.64■■□□□ 1.05
COMMD4-213ENST00000565834 ADGRF4Q8IZF3 695 aa21.64■■□□□ 1.05
COMMD4-213ENST00000565834 ZNF280CQ8ND82 737 aa21.64■■□□□ 1.05
COMMD4-213ENST00000565834 PIGSQ96S52 555 aa21.64■■□□□ 1.05
COMMD4-213ENST00000565834 SNCAIPQ9Y6H5 919 aa21.64■■□□□ 1.05
COMMD4-213ENST00000565834 ZHX2Q9Y6X8 837 aa21.64■■□□□ 1.05
COMMD4-213ENST00000565834 TMEM232C9JQI7 657 aa21.63■■□□□ 1.05
COMMD4-213ENST00000565834 USP14P54578 494 aa21.63■■□□□ 1.05
COMMD4-213ENST00000565834 SPP2Q13103 211 aa21.63■■□□□ 1.05
COMMD4-213ENST00000565834 IKQ13123 557 aaPredicted RBP21.63■■□□□ 1.05
COMMD4-213ENST00000565834 FOXD4L6Q3SYB3 417 aaPredicted RBP21.63■■□□□ 1.05
COMMD4-213ENST00000565834 FAM83BQ5T0W9 1011 aa21.63■■□□□ 1.05
COMMD4-213ENST00000565834 FOXD4L3Q6VB84 417 aaPredicted RBP21.63■■□□□ 1.05
COMMD4-213ENST00000565834 ARMC9Q7Z3E5 817 aa21.63■■□□□ 1.05
COMMD4-213ENST00000565834 LPAR1Q92633 364 aa21.63■■□□□ 1.05
COMMD4-213ENST00000565834 JMJD4Q9H9V9 463 aa21.63■■□□□ 1.05
COMMD4-213ENST00000565834 MMP1P03956 469 aa21.63■■□□□ 1.05
COMMD4-213ENST00000565834 MTMR2Q13614 643 aa21.63■■□□□ 1.05
COMMD4-213ENST00000565834 SAFBQ15424 915 aaKnown RBP eCLIP21.63■■□□□ 1.05
COMMD4-213ENST00000565834 MAP3K11Q16584 847 aa21.63■■□□□ 1.05
COMMD4-213ENST00000565834 ANKRD13AQ8IZ07 590 aa21.63■■□□□ 1.05
COMMD4-213ENST00000565834 KCNJ14Q9UNX9 436 aa21.63■■□□□ 1.05
COMMD4-213ENST00000565834 TRAF5O00463 557 aa21.62■■□□□ 1.05
COMMD4-213ENST00000565834 KIF23Q02241 960 aaPredicted RBP21.62■■□□□ 1.05
COMMD4-213ENST00000565834 NFKBIBQ15653 356 aa21.62■■□□□ 1.05
COMMD4-213ENST00000565834 BTNL9Q6UXG8 535 aa21.62■■□□□ 1.05
COMMD4-213ENST00000565834 HEATR3Q7Z4Q2 680 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms