RNA–Protein interactions for RNA: ENST00000565503.5

RPUSD1-206, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 3

Gene RPUSD1, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-206ENST00000565503 TRIM43BA6NCK2 446 aa25.76■■□□□ 1.71
RPUSD1-206ENST00000565503 RARBP10826 455 aa25.76■■□□□ 1.71
RPUSD1-206ENST00000565503 AKR1B1P15121 316 aa25.76■■□□□ 1.71
RPUSD1-206ENST00000565503 TMEM132BQ14DG7 1078 aa25.76■■□□□ 1.71
RPUSD1-206ENST00000565503 SH3RF1Q7Z6J0 888 aa25.76■■□□□ 1.71
RPUSD1-206ENST00000565503 MAFAQ8NHW3 353 aaPredicted RBP25.76■■□□□ 1.71
RPUSD1-206ENST00000565503 TRIM43Q96BQ3 446 aaPredicted RBP25.76■■□□□ 1.71
RPUSD1-206ENST00000565503 DYNLL2Q96FJ2 89 aa25.76■■□□□ 1.71
RPUSD1-206ENST00000565503 DNAJC2Q99543 621 aaKnown RBP25.76■■□□□ 1.71
RPUSD1-206ENST00000565503 XPNPEP3Q9NQH7 507 aa25.76■■□□□ 1.71
RPUSD1-206ENST00000565503 TACC3Q9Y6A5 838 aa25.76■■□□□ 1.71
RPUSD1-206ENST00000565503 TLE2Q04725 743 aa25.75■■□□□ 1.71
RPUSD1-206ENST00000565503 CLEC10AQ8IUN9 316 aa25.75■■□□□ 1.71
RPUSD1-206ENST00000565503 KIF1BPQ96EK5 621 aa25.75■■□□□ 1.71
RPUSD1-206ENST00000565503 ARMT1Q9H993 441 aa25.75■■□□□ 1.71
RPUSD1-206ENST00000565503 DIS3Q9Y2L1 958 aaKnown RBP25.75■■□□□ 1.71
RPUSD1-206ENST00000565503 TTC28Q96AY4 2481 aa25.74■■□□□ 1.71
RPUSD1-206ENST00000565503 RNF180Q86T96 592 aa25.74■■□□□ 1.71
RPUSD1-206ENST00000565503 RIOX2Q8IUF8 465 aa25.74■■□□□ 1.71
RPUSD1-206ENST00000565503 MMP19Q99542 508 aa25.74■■□□□ 1.71
RPUSD1-206ENST00000565503 SPTBN5Q9NRC6 3674 aaKnown RBP25.74■■□□□ 1.71
RPUSD1-206ENST00000565503 TMEM265A0A087WTH1 108 aa25.73■■□□□ 1.71
RPUSD1-206ENST00000565503 IFIT2P09913 472 aaKnown RBP25.73■■□□□ 1.71
RPUSD1-206ENST00000565503 AMOTL1Q8IY63 956 aa25.73■■□□□ 1.71
RPUSD1-206ENST00000565503 TINF2Q9BSI4 451 aa25.73■■□□□ 1.71
RPUSD1-206ENST00000565503 TTYH1Q9H313 450 aaPredicted RBP25.73■■□□□ 1.71
RPUSD1-206ENST00000565503 MBD4O95243 580 aa25.72■■□□□ 1.71
RPUSD1-206ENST00000565503 CLTBP09497 229 aa25.72■■□□□ 1.71
RPUSD1-206ENST00000565503 COPB2P35606 906 aa25.72■■□□□ 1.71
RPUSD1-206ENST00000565503 CDK8P49336 464 aa25.72■■□□□ 1.71
RPUSD1-206ENST00000565503 KCTD2Q14681 263 aa25.72■■□□□ 1.71
RPUSD1-206ENST00000565503 C12orf60Q5U649 245 aa25.72■■□□□ 1.71
RPUSD1-206ENST00000565503 SAMD1Q6SPF0 538 aaPredicted RBP25.72■■□□□ 1.71
RPUSD1-206ENST00000565503 PRKAB2O43741 272 aa25.71■■□□□ 1.71
RPUSD1-206ENST00000565503 ADD2P35612 726 aa25.71■■□□□ 1.71
RPUSD1-206ENST00000565503 ZNF792Q3KQV3 632 aa25.71■■□□□ 1.71
RPUSD1-206ENST00000565503 C16orf86Q6ZW13 317 aa25.71■■□□□ 1.71
RPUSD1-206ENST00000565503 KANSL2Q9H9L4 492 aa25.71■■□□□ 1.71
RPUSD1-206ENST00000565503 PAG1Q9NWQ8 432 aa25.71■■□□□ 1.71
RPUSD1-206ENST00000565503 GREB1LQ9C091 1923 aaPredicted RBP25.71■■□□□ 1.71
RPUSD1-206ENST00000565503 VWA5AO00534 786 aa25.7■■□□□ 1.7
RPUSD1-206ENST00000565503 KIAA0355O15063 1070 aa25.7■■□□□ 1.7
RPUSD1-206ENST00000565503 PGK2P07205 417 aa25.7■■□□□ 1.7
RPUSD1-206ENST00000565503 EEF2P13639 858 aaKnown RBP25.7■■□□□ 1.7
RPUSD1-206ENST00000565503 STAT3P40763 770 aa25.7■■□□□ 1.7
RPUSD1-206ENST00000565503 MYLIPQ8WY64 445 aa25.7■■□□□ 1.7
RPUSD1-206ENST00000565503 DDRGK1Q96HY6 314 aa25.7■■□□□ 1.7
RPUSD1-206ENST00000565503 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.7■■□□□ 1.7
RPUSD1-206ENST00000565503 GOPCQ9HD26 462 aa25.7■■□□□ 1.7
RPUSD1-206ENST00000565503 PPP1R9AQ9ULJ8 1098 aa25.7■■□□□ 1.7
RPUSD1-206ENST00000565503 A0A1W2PQ45 241 aaPredicted RBP25.69■■□□□ 1.7
RPUSD1-206ENST00000565503 A0A1W2PQY0 241 aa25.69■■□□□ 1.7
RPUSD1-206ENST00000565503 PGK1P00558 417 aa25.69■■□□□ 1.7
RPUSD1-206ENST00000565503 AKR1A1P14550 325 aa25.69■■□□□ 1.7
RPUSD1-206ENST00000565503 ITGB8P26012 769 aa25.69■■□□□ 1.7
RPUSD1-206ENST00000565503 RNPC3Q96LT9 517 aaKnown RBP25.69■■□□□ 1.7
RPUSD1-206ENST00000565503 FBXO28Q9NVF7 368 aa25.69■■□□□ 1.7
RPUSD1-206ENST00000565503 ZNF214Q9UL59 606 aaPredicted RBP25.69■■□□□ 1.7
RPUSD1-206ENST00000565503 USP17L12C9JPN9 530 aa25.68■■□□□ 1.7
RPUSD1-206ENST00000565503 USP17L21D6R901 530 aa25.68■■□□□ 1.7
RPUSD1-206ENST00000565503 HMMRO75330 724 aa25.68■■□□□ 1.7
RPUSD1-206ENST00000565503 ZNF865P0CJ78 1059 aaPredicted RBP25.68■■□□□ 1.7
RPUSD1-206ENST00000565503 RPAP2Q8IXW5 612 aaPredicted RBP25.68■■□□□ 1.7
RPUSD1-206ENST00000565503 MSL3Q8N5Y2 521 aaKnown RBP25.68■■□□□ 1.7
RPUSD1-206ENST00000565503 PANK1Q8TE04 598 aa25.68■■□□□ 1.7
RPUSD1-206ENST00000565503 TSEN34Q9BSV6 310 aaKnown RBP25.68■■□□□ 1.7
RPUSD1-206ENST00000565503 CNPY2Q9Y2B0 182 aa25.68■■□□□ 1.7
RPUSD1-206ENST00000565503 CYP2D7A0A087X1C5 515 aa25.67■■□□□ 1.7
RPUSD1-206ENST00000565503 APBB1O00213 710 aa25.67■■□□□ 1.7
RPUSD1-206ENST00000565503 FOSL2P15408 326 aa25.67■■□□□ 1.7
RPUSD1-206ENST00000565503 RAG1P15918 1043 aa25.67■■□□□ 1.7
RPUSD1-206ENST00000565503 TAL1P17542 331 aaPredicted RBP25.67■■□□□ 1.7
RPUSD1-206ENST00000565503 REPS2Q8NFH8 660 aa25.67■■□□□ 1.7
RPUSD1-206ENST00000565503 TOX2Q96NM4 488 aa25.67■■□□□ 1.7
RPUSD1-206ENST00000565503 ZBED9Q6R2W3 1325 aa25.66■■□□□ 1.7
RPUSD1-206ENST00000565503 SMIM22K7EJ46 135 aa25.66■■□□□ 1.7
RPUSD1-206ENST00000565503 PQBP1O60828 265 aaKnown RBP25.66■■□□□ 1.7
RPUSD1-206ENST00000565503 RAB11FIP3O75154 756 aa25.66■■□□□ 1.7
RPUSD1-206ENST00000565503 ADAMTS4O75173 837 aa25.66■■□□□ 1.7
RPUSD1-206ENST00000565503 ATP5JP18859 108 aa25.66■■□□□ 1.7
RPUSD1-206ENST00000565503 FPGSQ05932 587 aa25.66■■□□□ 1.7
RPUSD1-206ENST00000565503 UBE3CQ15386 1083 aa25.66■■□□□ 1.7
RPUSD1-206ENST00000565503 ANKRD33Q7Z3H0 272 aa25.66■■□□□ 1.7
RPUSD1-206ENST00000565503 MS4A1P11836 297 aa25.65■■□□□ 1.7
RPUSD1-206ENST00000565503 EPHB4P54760 987 aa25.65■■□□□ 1.7
RPUSD1-206ENST00000565503 SLFNL1Q499Z3 407 aa25.65■■□□□ 1.7
RPUSD1-206ENST00000565503 FAM83BQ5T0W9 1011 aa25.65■■□□□ 1.7
RPUSD1-206ENST00000565503 HAUS7Q99871 368 aa25.65■■□□□ 1.7
RPUSD1-206ENST00000565503 BOLA2Q9H3K6 86 aa25.65■■□□□ 1.7
RPUSD1-206ENST00000565503 TMEM39AQ9NV64 488 aa25.65■■□□□ 1.7
RPUSD1-206ENST00000565503 MCM3APO60318 1980 aa25.65■■□□□ 1.7
RPUSD1-206ENST00000565503 SYNGAP1Q96PV0 1343 aa25.64■■□□□ 1.7
RPUSD1-206ENST00000565503 MYO9BQ13459 2157 aa25.64■■□□□ 1.7
RPUSD1-206ENST00000565503 MOXD2PA6NHM9 499 aa25.64■■□□□ 1.7
RPUSD1-206ENST00000565503 HNRNPUQ00839 825 aaKnown RBP eCLIP25.64■■□□□ 1.7
RPUSD1-206ENST00000565503 NUP133Q8WUM0 1156 aa25.64■■□□□ 1.7
RPUSD1-206ENST00000565503 SLC4A4Q9Y6R1 1079 aa25.64■■□□□ 1.7
RPUSD1-206ENST00000565503 MYH4Q9Y623 1939 aa25.64■■□□□ 1.69
RPUSD1-206ENST00000565503 DCDC2CA8MYV0 355 aa25.63■■□□□ 1.69
RPUSD1-206ENST00000565503 ACLYP53396 1101 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms