RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 DPH2Q9BQC3 489 aaPredicted RBP7.13□□□□□ -1.27
CHD9-215ENST00000565442 XYLT2Q9H1B5 865 aa7.13□□□□□ -1.27
CHD9-215ENST00000565442 CAPN10Q9HC96 672 aa7.13□□□□□ -1.27
CHD9-215ENST00000565442 GPATCH2Q9NW75 528 aa7.13□□□□□ -1.27
CHD9-215ENST00000565442 SASH1O94885 1247 aa7.12□□□□□ -1.27
CHD9-215ENST00000565442 PF4P02776 101 aa7.12□□□□□ -1.27
CHD9-215ENST00000565442 FAM160A1Q05DH4 1040 aa7.12□□□□□ -1.27
CHD9-215ENST00000565442 AGMOQ6ZNB7 445 aa7.12□□□□□ -1.27
CHD9-215ENST00000565442 TSPYL5Q86VY4 417 aaPredicted RBP7.12□□□□□ -1.27
CHD9-215ENST00000565442 GPR62Q9BZJ7 368 aa7.12□□□□□ -1.27
CHD9-215ENST00000565442 ADAMTS1Q9UHI8 967 aa7.12□□□□□ -1.27
CHD9-215ENST00000565442 TFE3P19532 575 aaPredicted RBP7.11□□□□□ -1.27
CHD9-215ENST00000565442 LMNB1P20700 586 aa7.11□□□□□ -1.27
CHD9-215ENST00000565442 LTKP29376 864 aa7.11□□□□□ -1.27
CHD9-215ENST00000565442 EIF4A3P38919 411 aaKnown RBP7.11□□□□□ -1.27
CHD9-215ENST00000565442 NFKB2Q00653 900 aa7.11□□□□□ -1.27
CHD9-215ENST00000565442 DNAJB8Q8NHS0 232 aa7.11□□□□□ -1.27
CHD9-215ENST00000565442 RHOVQ96L33 236 aa7.11□□□□□ -1.27
CHD9-215ENST00000565442 C8orf37Q96NL8 207 aa7.11□□□□□ -1.27
CHD9-215ENST00000565442 TJP2Q9UDY2 1190 aa7.11□□□□□ -1.27
CHD9-215ENST00000565442 GPR160Q9UJ42 338 aa7.11□□□□□ -1.27
CHD9-215ENST00000565442 INPP5FQ9Y2H2 1132 aa7.11□□□□□ -1.27
CHD9-215ENST00000565442 PCDHB5Q9Y5E4 795 aa7.11□□□□□ -1.27
CHD9-215ENST00000565442 PCDHA11Q9Y5I1 949 aa7.11□□□□□ -1.27
CHD9-215ENST00000565442 OTOL1A6NHN0 477 aaPredicted RBP7.1□□□□□ -1.27
CHD9-215ENST00000565442 PI3P19957 117 aa7.1□□□□□ -1.27
CHD9-215ENST00000565442 RPS26P62854 115 aaKnown RBP7.1□□□□□ -1.27
CHD9-215ENST00000565442 CAMK2GQ13555 558 aaPredicted RBP7.1□□□□□ -1.27
CHD9-215ENST00000565442 SNX17Q15036 470 aa7.1□□□□□ -1.27
CHD9-215ENST00000565442 SPPL2CQ8IUH8 684 aa7.1□□□□□ -1.27
CHD9-215ENST00000565442 ZNF296Q8WUU4 475 aaPredicted RBP7.1□□□□□ -1.27
CHD9-215ENST00000565442 SYTL4Q96C24 671 aaPredicted RBP7.1□□□□□ -1.27
CHD9-215ENST00000565442 TMEM87BQ96K49 555 aa7.1□□□□□ -1.27
CHD9-215ENST00000565442 TINF2Q9BSI4 451 aa7.1□□□□□ -1.27
CHD9-215ENST00000565442 SPON2Q9BUD6 331 aa7.1□□□□□ -1.27
CHD9-215ENST00000565442 TACC3Q9Y6A5 838 aa7.1□□□□□ -1.27
CHD9-215ENST00000565442 GFRA2O00451 464 aa7.09□□□□□ -1.27
CHD9-215ENST00000565442 PGRP06401 933 aa7.09□□□□□ -1.27
CHD9-215ENST00000565442 CELA3BP08861 270 aa7.09□□□□□ -1.27
CHD9-215ENST00000565442 CHRNEQ04844 493 aa7.09□□□□□ -1.27
CHD9-215ENST00000565442 PAK2Q13177 524 aa7.09□□□□□ -1.27
CHD9-215ENST00000565442 SEPT6Q14141 434 aa7.09□□□□□ -1.27
CHD9-215ENST00000565442 SNAP47Q5SQN1 464 aa7.09□□□□□ -1.27
CHD9-215ENST00000565442 SLC6A19Q695T7 634 aa7.09□□□□□ -1.27
CHD9-215ENST00000565442 FBXL19Q6PCT2 694 aa7.09□□□□□ -1.27
CHD9-215ENST00000565442 KIAA0825Q8IV33 1275 aa7.09□□□□□ -1.27
CHD9-215ENST00000565442 GOLM1Q8NBJ4 401 aa7.09□□□□□ -1.27
CHD9-215ENST00000565442 JARID2Q92833 1246 aaPredicted RBP7.09□□□□□ -1.27
CHD9-215ENST00000565442 BORCS6Q96GS4 357 aa7.09□□□□□ -1.27
CHD9-215ENST00000565442 ADRB1P08588 477 aa7.08□□□□□ -1.28
CHD9-215ENST00000565442 LMNB2Q03252 620 aa7.08□□□□□ -1.28
CHD9-215ENST00000565442 ERICH6BQ5W0A0 696 aa7.08□□□□□ -1.28
CHD9-215ENST00000565442 DTWD2Q8NBA8 298 aa7.08□□□□□ -1.28
CHD9-215ENST00000565442 PANK1Q8TE04 598 aa7.08□□□□□ -1.28
CHD9-215ENST00000565442 SHISA4Q96DD7 197 aa7.08□□□□□ -1.28
CHD9-215ENST00000565442 SIGLEC10Q96LC7 697 aa7.08□□□□□ -1.28
CHD9-215ENST00000565442 MIR1-1HGQ9H1L0 117 aa7.08□□□□□ -1.28
CHD9-215ENST00000565442 CEP131Q9UPN4 1083 aa7.08□□□□□ -1.28
CHD9-215ENST00000565442 IRAK3Q9Y616 596 aa7.08□□□□□ -1.28
CHD9-215ENST00000565442 OR14I1A6ND48 311 aa7.07□□□□□ -1.28
CHD9-215ENST00000565442 PSPNO60542 156 aa7.07□□□□□ -1.28
CHD9-215ENST00000565442 GARTP22102 1010 aa7.07□□□□□ -1.28
CHD9-215ENST00000565442 AFF3P51826 1226 aaKnown RBP7.07□□□□□ -1.28
CHD9-215ENST00000565442 DUSP4Q13115 394 aa7.07□□□□□ -1.28
CHD9-215ENST00000565442 GNL2Q13823 731 aaKnown RBP7.07□□□□□ -1.28
CHD9-215ENST00000565442 BNC2Q6ZN30 1099 aaPredicted RBP7.07□□□□□ -1.28
CHD9-215ENST00000565442 ANKS4BQ8N8V4 417 aa7.07□□□□□ -1.28
CHD9-215ENST00000565442 DACT3Q96B18 629 aaPredicted RBP7.07□□□□□ -1.28
CHD9-215ENST00000565442 EAF1Q96JC9 268 aaPredicted RBP7.07□□□□□ -1.28
CHD9-215ENST00000565442 UBP1Q9NZI7 540 aa7.07□□□□□ -1.28
CHD9-215ENST00000565442 KCNH3Q9ULD8 1083 aa7.07□□□□□ -1.28
CHD9-215ENST00000565442 SUPT16HQ9Y5B9 1047 aaKnown RBP7.07□□□□□ -1.28
CHD9-215ENST00000565442 F13A1P00488 732 aa7.06□□□□□ -1.28
CHD9-215ENST00000565442 GALK1P51570 392 aa7.06□□□□□ -1.28
CHD9-215ENST00000565442 FEZF2Q8TBJ5 459 aa7.06□□□□□ -1.28
CHD9-215ENST00000565442 GPRASP2Q96D09 838 aa7.06□□□□□ -1.28
CHD9-215ENST00000565442 KCNQ5Q9NR82 932 aa7.06□□□□□ -1.28
CHD9-215ENST00000565442 EBF1Q9UH73 591 aa7.06□□□□□ -1.28
CHD9-215ENST00000565442 MBD1Q9UIS9 605 aaPredicted RBP7.06□□□□□ -1.28
CHD9-215ENST00000565442 SLC22A31A6NKX4 558 aa7.05□□□□□ -1.28
CHD9-215ENST00000565442 DNAJA1P31689 397 aaKnown RBP7.05□□□□□ -1.28
CHD9-215ENST00000565442 GJA8P48165 433 aa7.05□□□□□ -1.28
CHD9-215ENST00000565442 ADGRF1Q5T601 910 aa7.05□□□□□ -1.28
CHD9-215ENST00000565442 MCATQ8IVS2 390 aaKnown RBP7.05□□□□□ -1.28
CHD9-215ENST00000565442 FBXO27Q8NI29 283 aa7.05□□□□□ -1.28
CHD9-215ENST00000565442 PPP1R13LQ8WUF5 828 aa7.05□□□□□ -1.28
CHD9-215ENST00000565442 USP35Q9P2H5 1018 aa7.05□□□□□ -1.28
CHD9-215ENST00000565442 HRKO00198 91 aa7.04□□□□□ -1.28
CHD9-215ENST00000565442 TLR3O15455 904 aaKnown RBP7.04□□□□□ -1.28
CHD9-215ENST00000565442 GREM1O60565 184 aa7.04□□□□□ -1.28
CHD9-215ENST00000565442 CRKP46108 304 aa7.04□□□□□ -1.28
CHD9-215ENST00000565442 SRSF3P84103 164 aaKnown RBP7.04□□□□□ -1.28
CHD9-215ENST00000565442 APOBRQ0VD83 1088 aa7.04□□□□□ -1.28
CHD9-215ENST00000565442 FAM196AQ6ZSG2 479 aa7.04□□□□□ -1.28
CHD9-215ENST00000565442 SLC43A3Q8NBI5 491 aa7.04□□□□□ -1.28
CHD9-215ENST00000565442 GATAD2BQ8WXI9 593 aa7.04□□□□□ -1.28
CHD9-215ENST00000565442 TMPRSS5Q9H3S3 457 aa7.04□□□□□ -1.28
CHD9-215ENST00000565442 PPP1R1BQ9UD71 204 aaPredicted RBP7.04□□□□□ -1.28
CHD9-215ENST00000565442 FAM221AA4D161 298 aa7.03□□□□□ -1.28
CHD9-215ENST00000565442 IGSF3O75054 1194 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms