RNA–Protein interactions for RNA: ENST00000565224.5

SMG1-210, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-210ENST00000565224 TRIM14Q14142 442 aa8.21□□□□□ -1.1
SMG1-210ENST00000565224 SMC1AQ14683 1233 aaKnown RBP8.21□□□□□ -1.1
SMG1-210ENST00000565224 ZNF569Q5MCW4 686 aa8.21□□□□□ -1.1
SMG1-210ENST00000565224 PIK3AP1Q6ZUJ8 805 aa8.21□□□□□ -1.1
SMG1-210ENST00000565224 ANKRD18AQ8IVF6 992 aa8.21□□□□□ -1.1
SMG1-210ENST00000565224 SRBD1Q8N5C6 995 aaKnown RBP8.21□□□□□ -1.1
SMG1-210ENST00000565224 STAMQ92783 540 aa8.21□□□□□ -1.1
SMG1-210ENST00000565224 RMND1Q9NWS8 449 aa8.21□□□□□ -1.1
SMG1-210ENST00000565224 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.21□□□□□ -1.1
SMG1-210ENST00000565224 A0A0U1RQJ8 604 aa8.2□□□□□ -1.1
SMG1-210ENST00000565224 CTAGE9A4FU28 777 aa8.2□□□□□ -1.1
SMG1-210ENST00000565224 USP17L12C9JPN9 530 aa8.2□□□□□ -1.1
SMG1-210ENST00000565224 USP17L21D6R901 530 aa8.2□□□□□ -1.1
SMG1-210ENST00000565224 COPB1P53618 953 aaKnown RBP8.2□□□□□ -1.1
SMG1-210ENST00000565224 TUBB4BP68371 445 aa8.2□□□□□ -1.1
SMG1-210ENST00000565224 LONRF2Q1L5Z9 754 aa8.2□□□□□ -1.1
SMG1-210ENST00000565224 KIF4BQ2VIQ3 1234 aa8.2□□□□□ -1.1
SMG1-210ENST00000565224 ZNF658Q5TYW1 1059 aaPredicted RBP8.2□□□□□ -1.1
SMG1-210ENST00000565224 NELFBQ8WX92 580 aa8.2□□□□□ -1.1
SMG1-210ENST00000565224 ATRIPQ8WXE1 791 aa8.2□□□□□ -1.1
SMG1-210ENST00000565224 FUT8Q9BYC5 575 aa8.2□□□□□ -1.1
SMG1-210ENST00000565224 ZSWIM4Q9H7M6 989 aa8.2□□□□□ -1.1
SMG1-210ENST00000565224 ABHD10Q9NUJ1 306 aa8.2□□□□□ -1.1
SMG1-210ENST00000565224 CALCOCO1Q9P1Z2 691 aa8.2□□□□□ -1.1
SMG1-210ENST00000565224 USP21Q9UK80 565 aa8.2□□□□□ -1.1
SMG1-210ENST00000565224 ZNF652Q9Y2D9 606 aa8.2□□□□□ -1.1
SMG1-210ENST00000565224 LAMB2P55268 1798 aa8.2□□□□□ -1.1
SMG1-210ENST00000565224 CACNA1SQ13698 1873 aa8.2□□□□□ -1.1
SMG1-210ENST00000565224 COL14A1Q05707 1796 aaKnown RBP8.2□□□□□ -1.1
SMG1-210ENST00000565224 LOC102724428A0A0B4J2F2 783 aa8.2□□□□□ -1.1
SMG1-210ENST00000565224 A0A0G2JS52 829 aa8.2□□□□□ -1.1
SMG1-210ENST00000565224 KCNJ18B7U540 433 aa8.2□□□□□ -1.1
SMG1-210ENST00000565224 COBLO75128 1261 aa8.2□□□□□ -1.1
SMG1-210ENST00000565224 MCM7P33993 719 aa8.2□□□□□ -1.1
SMG1-210ENST00000565224 SIK1P57059 783 aa8.2□□□□□ -1.1
SMG1-210ENST00000565224 ERVK-24P63145 666 aa8.2□□□□□ -1.1
SMG1-210ENST00000565224 KCNJ12Q14500 433 aa8.2□□□□□ -1.1
SMG1-210ENST00000565224 IL17AQ16552 155 aa8.2□□□□□ -1.1
SMG1-210ENST00000565224 PFKFB3Q16875 520 aaPredicted RBP8.2□□□□□ -1.1
SMG1-210ENST00000565224 TCP11X2Q5H9J9 407 aa8.2□□□□□ -1.1
SMG1-210ENST00000565224 ARL6IP4Q66PJ3 421 aaKnown RBP8.2□□□□□ -1.1
SMG1-210ENST00000565224 CYP26C1Q6V0L0 522 aa8.2□□□□□ -1.1
SMG1-210ENST00000565224 ACRBPQ8NEB7 543 aa8.2□□□□□ -1.1
SMG1-210ENST00000565224 ZNF384Q8TF68 577 aa8.2□□□□□ -1.1
SMG1-210ENST00000565224 MTRQ99707 1265 aa8.2□□□□□ -1.1
SMG1-210ENST00000565224 BSDC1Q9NW68 430 aaPredicted RBP8.2□□□□□ -1.1
SMG1-210ENST00000565224 TAB2Q9NYJ8 693 aa8.2□□□□□ -1.1
SMG1-210ENST00000565224 MYO1AQ9UBC5 1043 aa8.2□□□□□ -1.1
SMG1-210ENST00000565224 PUF60Q9UHX1 559 aaKnown RBP8.2□□□□□ -1.1
SMG1-210ENST00000565224 MYH6P13533 1939 aa8.2□□□□□ -1.1
SMG1-210ENST00000565224 DOT1LQ8TEK3 1739 aa8.19□□□□□ -1.1
SMG1-210ENST00000565224 COL4A1P02462 1669 aa8.19□□□□□ -1.1
SMG1-210ENST00000565224 NMT2O60551 498 aa8.19□□□□□ -1.1
SMG1-210ENST00000565224 RPN1P04843 607 aaKnown RBP8.19□□□□□ -1.1
SMG1-210ENST00000565224 CALML3P27482 149 aa8.19□□□□□ -1.1
SMG1-210ENST00000565224 LONP1P36776 959 aaKnown RBP8.19□□□□□ -1.1
SMG1-210ENST00000565224 ITPK1Q13572 414 aa8.19□□□□□ -1.1
SMG1-210ENST00000565224 SLC35F6Q8N357 371 aa8.19□□□□□ -1.1
SMG1-210ENST00000565224 MSANTD4Q8NCY6 345 aa8.19□□□□□ -1.1
SMG1-210ENST00000565224 HNRNPLLQ8WVV9 542 aaKnown RBP8.19□□□□□ -1.1
SMG1-210ENST00000565224 FAM84BQ96KN1 310 aaPredicted RBP8.19□□□□□ -1.1
SMG1-210ENST00000565224 NUP88Q99567 741 aaPredicted RBP8.19□□□□□ -1.1
SMG1-210ENST00000565224 NAPGQ99747 312 aaPredicted RBP8.19□□□□□ -1.1
SMG1-210ENST00000565224 CRNKL1Q9BZJ0 848 aaKnown RBP8.19□□□□□ -1.1
SMG1-210ENST00000565224 VPS16Q9H269 839 aa8.19□□□□□ -1.1
SMG1-210ENST00000565224 ANKZF1Q9H8Y5 726 aa8.19□□□□□ -1.1
SMG1-210ENST00000565224 WTIPA6NIX2 430 aaPredicted RBP8.19□□□□□ -1.1
SMG1-210ENST00000565224 MAP2K7O14733 419 aa8.19□□□□□ -1.1
SMG1-210ENST00000565224 KIF5BP33176 963 aa8.19□□□□□ -1.1
SMG1-210ENST00000565224 USP5P45974 858 aa8.19□□□□□ -1.1
SMG1-210ENST00000565224 SF3B3Q15393 1217 aaKnown RBP8.19□□□□□ -1.1
SMG1-210ENST00000565224 WHAMMP3Q1A5X7 153 aa8.19□□□□□ -1.1
SMG1-210ENST00000565224 ERFEQ4G0M1 354 aa8.19□□□□□ -1.1
SMG1-210ENST00000565224 FAM47AQ5JRC9 791 aa8.19□□□□□ -1.1
SMG1-210ENST00000565224 TXLNBQ8N3L3 684 aa8.19□□□□□ -1.1
SMG1-210ENST00000565224 NSUN4Q96CB9 384 aaKnown RBP8.19□□□□□ -1.1
SMG1-210ENST00000565224 CDCA7Q9BWT1 371 aaPredicted RBP8.19□□□□□ -1.1
SMG1-210ENST00000565224 QTRT2Q9H974 415 aaKnown RBP8.19□□□□□ -1.1
SMG1-210ENST00000565224 DCP1AQ9NPI6 582 aaPredicted RBP8.19□□□□□ -1.1
SMG1-210ENST00000565224 RAB21Q9UL25 225 aa8.19□□□□□ -1.1
SMG1-210ENST00000565224 MINPP1Q9UNW1 487 aa8.19□□□□□ -1.1
SMG1-210ENST00000565224 DLEC1Q9Y238 1755 aa8.19□□□□□ -1.1
SMG1-210ENST00000565224 RREB1Q92766 1687 aa8.19□□□□□ -1.1
SMG1-210ENST00000565224 NRAPQ86VF7 1730 aa8.18□□□□□ -1.1
SMG1-210ENST00000565224 H7C1D1 291 aa8.18□□□□□ -1.1
SMG1-210ENST00000565224 RNF225M0QZC1 329 aaPredicted RBP8.18□□□□□ -1.1
SMG1-210ENST00000565224 ERLIN1O75477 346 aa8.18□□□□□ -1.1
SMG1-210ENST00000565224 CDC25AP30304 524 aa8.18□□□□□ -1.1
SMG1-210ENST00000565224 KRT9P35527 623 aa8.18□□□□□ -1.1
SMG1-210ENST00000565224 STAT6P42226 847 aa8.18□□□□□ -1.1
SMG1-210ENST00000565224 ARHGAP25P42331 645 aa8.18□□□□□ -1.1
SMG1-210ENST00000565224 MECOMQ03112 1051 aa8.18□□□□□ -1.1
SMG1-210ENST00000565224 GPS2Q13227 327 aa8.18□□□□□ -1.1
SMG1-210ENST00000565224 WWC2Q6AWC2 1192 aa8.18□□□□□ -1.1
SMG1-210ENST00000565224 C3orf67Q6ZVT6 689 aa8.18□□□□□ -1.1
SMG1-210ENST00000565224 FBXO33Q7Z6M2 555 aa8.18□□□□□ -1.1
SMG1-210ENST00000565224 ATP8A2Q9NTI2 1148 aa8.18□□□□□ -1.1
SMG1-210ENST00000565224 ARPP21Q9UBL0 812 aaPredicted RBP8.18□□□□□ -1.1
SMG1-210ENST00000565224 GDAQ9Y2T3 454 aa8.18□□□□□ -1.1
SMG1-210ENST00000565224 KAT6BQ8WYB5 2073 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms