RNA–Protein interactions for RNA: ENST00000565167.1

RPAP1-208, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 1,712 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-208ENST00000565167 F5H6K3 240 aa16.49■□□□□ 0.23
RPAP1-208ENST00000565167 ASNSP08243 561 aa16.49■□□□□ 0.23
RPAP1-208ENST00000565167 KLRC3Q07444 240 aa16.49■□□□□ 0.23
RPAP1-208ENST00000565167 SAFBQ15424 915 aaKnown RBP eCLIP16.49■□□□□ 0.23
RPAP1-208ENST00000565167 GPATCH4Q5T3I0 446 aaKnown RBP16.49■□□□□ 0.23
RPAP1-208ENST00000565167 SLFN13Q68D06 897 aa16.49■□□□□ 0.23
RPAP1-208ENST00000565167 ATL3Q6DD88 541 aa16.49■□□□□ 0.23
RPAP1-208ENST00000565167 GMCL1P1Q8NEA9 526 aa16.49■□□□□ 0.23
RPAP1-208ENST00000565167 SHISA4Q96DD7 197 aa16.49■□□□□ 0.23
RPAP1-208ENST00000565167 PHF20Q9BVI0 1012 aa16.49■□□□□ 0.23
RPAP1-208ENST00000565167 UBA5Q9GZZ9 404 aa16.49■□□□□ 0.23
RPAP1-208ENST00000565167 GPCPD1Q9NPB8 672 aa16.49■□□□□ 0.23
RPAP1-208ENST00000565167 VPS54Q9P1Q0 977 aa16.49■□□□□ 0.23
RPAP1-208ENST00000565167 MYH15Q9Y2K3 1946 aa16.49■□□□□ 0.23
RPAP1-208ENST00000565167 FRMPD2Q68DX3 1309 aaPredicted RBP16.49■□□□□ 0.23
RPAP1-208ENST00000565167 DCAF15Q66K64 600 aa16.48■□□□□ 0.23
RPAP1-208ENST00000565167 DCAF4Q8WV16 495 aa16.48■□□□□ 0.23
RPAP1-208ENST00000565167 SCAND2PQ9GZW5 306 aaPredicted RBP16.48■□□□□ 0.23
RPAP1-208ENST00000565167 CFAP45Q9UL16 551 aa16.48■□□□□ 0.23
RPAP1-208ENST00000565167 BTBD18B2RXH4 712 aa16.48■□□□□ 0.23
RPAP1-208ENST00000565167 FIBPO43427 364 aa16.48■□□□□ 0.23
RPAP1-208ENST00000565167 CTNND1O60716 968 aaKnown RBP16.48■□□□□ 0.23
RPAP1-208ENST00000565167 GNL2Q13823 731 aaKnown RBP16.48■□□□□ 0.23
RPAP1-208ENST00000565167 CSPP1Q1MSJ5 1256 aa16.48■□□□□ 0.23
RPAP1-208ENST00000565167 PRAMEF18Q5VWM3 479 aa16.48■□□□□ 0.23
RPAP1-208ENST00000565167 DIS3L2Q8IYB7 885 aaKnown RBP16.48■□□□□ 0.23
RPAP1-208ENST00000565167 RRP36Q96EU6 259 aaKnown RBP16.48■□□□□ 0.23
RPAP1-208ENST00000565167 ZNF396Q96N95 335 aaPredicted RBP16.48■□□□□ 0.23
RPAP1-208ENST00000565167 FOXP1Q9H334 677 aaPredicted RBP16.48■□□□□ 0.23
RPAP1-208ENST00000565167 ARHGEF10LQ9HCE6 1279 aa16.48■□□□□ 0.23
RPAP1-208ENST00000565167 VAT1LQ9HCJ6 419 aa16.48■□□□□ 0.23
RPAP1-208ENST00000565167 SH3GLB2Q9NR46 395 aa16.48■□□□□ 0.23
RPAP1-208ENST00000565167 GINM1Q9NU53 330 aa16.48■□□□□ 0.23
RPAP1-208ENST00000565167 TMX2Q9Y320 296 aa16.48■□□□□ 0.23
RPAP1-208ENST00000565167 RAD21O60216 631 aa16.47■□□□□ 0.23
RPAP1-208ENST00000565167 CCDC96Q2M329 555 aa16.47■□□□□ 0.23
RPAP1-208ENST00000565167 TTBK2Q6IQ55 1244 aa16.47■□□□□ 0.23
RPAP1-208ENST00000565167 USP50Q70EL3 339 aaPredicted RBP16.47■□□□□ 0.23
RPAP1-208ENST00000565167 KCTD1Q719H9 257 aa16.47■□□□□ 0.23
RPAP1-208ENST00000565167 ACER1Q8TDN7 264 aa16.47■□□□□ 0.23
RPAP1-208ENST00000565167 DCPSQ96C86 337 aaKnown RBP16.47■□□□□ 0.23
RPAP1-208ENST00000565167 GMCL1Q96IK5 515 aa16.47■□□□□ 0.23
RPAP1-208ENST00000565167 ZNF341Q9BYN7 854 aa16.47■□□□□ 0.23
RPAP1-208ENST00000565167 ZNF112Q9UJU3 913 aa16.47■□□□□ 0.23
RPAP1-208ENST00000565167 ECE1P42892 770 aa16.46■□□□□ 0.23
RPAP1-208ENST00000565167 SLC1A4P43007 532 aa16.46■□□□□ 0.23
RPAP1-208ENST00000565167 SUPT20HL1Q3ZLR7 823 aa16.46■□□□□ 0.23
RPAP1-208ENST00000565167 MYSM1Q5VVJ2 828 aa16.46■□□□□ 0.23
RPAP1-208ENST00000565167 PIGSQ96S52 555 aa16.46■□□□□ 0.23
RPAP1-208ENST00000565167 DDX49Q9Y6V7 483 aaKnown RBP16.46■□□□□ 0.23
RPAP1-208ENST00000565167 ATAD5Q96QE3 1844 aa16.46■□□□□ 0.23
RPAP1-208ENST00000565167 GADD45BO75293 160 aaPredicted RBP16.45■□□□□ 0.22
RPAP1-208ENST00000565167 NDUFB10O96000 172 aa16.45■□□□□ 0.22
RPAP1-208ENST00000565167 EPHX2P34913 555 aa16.45■□□□□ 0.22
RPAP1-208ENST00000565167 NOSTRINQ8IVI9 506 aa16.45■□□□□ 0.22
RPAP1-208ENST00000565167 ADGRF4Q8IZF3 695 aa16.45■□□□□ 0.22
RPAP1-208ENST00000565167 OXER1Q8TDS5 423 aa16.45■□□□□ 0.22
RPAP1-208ENST00000565167 LEO1Q8WVC0 666 aaPredicted RBP16.45■□□□□ 0.22
RPAP1-208ENST00000565167 SPATA32Q96LK8 384 aa16.45■□□□□ 0.22
RPAP1-208ENST00000565167 USP28Q96RU2 1077 aa16.45■□□□□ 0.22
RPAP1-208ENST00000565167 JMJD4Q9H9V9 463 aa16.45■□□□□ 0.22
RPAP1-208ENST00000565167 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.45■□□□□ 0.22
RPAP1-208ENST00000565167 RCOR1Q9UKL0 485 aa16.45■□□□□ 0.22
RPAP1-208ENST00000565167 ELP1O95163 1332 aa16.45■□□□□ 0.22
RPAP1-208ENST00000565167 SLC16A2P36021 539 aa16.45■□□□□ 0.22
RPAP1-208ENST00000565167 NLRP5P59047 1200 aa16.45■□□□□ 0.22
RPAP1-208ENST00000565167 NPY5RQ15761 445 aa16.45■□□□□ 0.22
RPAP1-208ENST00000565167 WWC2Q6AWC2 1192 aa16.45■□□□□ 0.22
RPAP1-208ENST00000565167 FAM177A1Q8N128 213 aaPredicted RBP16.45■□□□□ 0.22
RPAP1-208ENST00000565167 ZC3H15Q8WU90 426 aaKnown RBP16.45■□□□□ 0.22
RPAP1-208ENST00000565167 GPKOWQ92917 476 aaPredicted RBP eCLIP16.45■□□□□ 0.22
RPAP1-208ENST00000565167 BARHL2Q9NY43 387 aa16.45■□□□□ 0.22
RPAP1-208ENST00000565167 SEC63Q9UGP8 760 aaKnown RBP16.45■□□□□ 0.22
RPAP1-208ENST00000565167 BMP3P12645 472 aa16.44■□□□□ 0.22
RPAP1-208ENST00000565167 INPP5BP32019 993 aa16.44■□□□□ 0.22
RPAP1-208ENST00000565167 KRT2P35908 639 aa16.44■□□□□ 0.22
RPAP1-208ENST00000565167 CEBPZQ03701 1054 aaKnown RBP16.44■□□□□ 0.22
RPAP1-208ENST00000565167 NR5A1Q13285 461 aa16.44■□□□□ 0.22
RPAP1-208ENST00000565167 KLHL40Q2TBA0 621 aa16.44■□□□□ 0.22
RPAP1-208ENST00000565167 HEATR3Q7Z4Q2 680 aa16.44■□□□□ 0.22
RPAP1-208ENST00000565167 HOMER1Q86YM7 354 aa16.44■□□□□ 0.22
RPAP1-208ENST00000565167 SULF1Q8IWU6 871 aa16.44■□□□□ 0.22
RPAP1-208ENST00000565167 SH2D4AQ9H788 454 aa16.44■□□□□ 0.22
RPAP1-208ENST00000565167 GOPCQ9HD26 462 aa16.44■□□□□ 0.22
RPAP1-208ENST00000565167 RTEL1Q9NZ71 1219 aa16.44■□□□□ 0.22
RPAP1-208ENST00000565167 SCN4AP35499 1836 aa16.43■□□□□ 0.22
RPAP1-208ENST00000565167 STXBP3O00186 592 aa16.43■□□□□ 0.22
RPAP1-208ENST00000565167 CALML3P27482 149 aa16.43■□□□□ 0.22
RPAP1-208ENST00000565167 GPT2Q8TD30 523 aa16.43■□□□□ 0.22
RPAP1-208ENST00000565167 MTMR8Q96EF0 704 aa16.43■□□□□ 0.22
RPAP1-208ENST00000565167 NUP88Q99567 741 aaPredicted RBP16.43■□□□□ 0.22
RPAP1-208ENST00000565167 FTOQ9C0B1 505 aaKnown RBP eCLIP16.43■□□□□ 0.22
RPAP1-208ENST00000565167 VCPKMTQ9H867 229 aa16.43■□□□□ 0.22
RPAP1-208ENST00000565167 BRMS1Q9HCU9 246 aa16.43■□□□□ 0.22
RPAP1-208ENST00000565167 ISY1Q9ULR0 285 aaKnown RBP16.43■□□□□ 0.22
RPAP1-208ENST00000565167 PNMA6FA0A0J9YX94 578 aa16.42■□□□□ 0.22
RPAP1-208ENST00000565167 IQCA1LA6NCM1 817 aa16.42■□□□□ 0.22
RPAP1-208ENST00000565167 POTECB2RU33 542 aa16.42■□□□□ 0.22
RPAP1-208ENST00000565167 USP17L10C9JJH3 530 aa16.42■□□□□ 0.22
RPAP1-208ENST00000565167 UBE2HP62256 183 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms