RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 GOLGA6AQ9NYA3 693 aa23.04■■□□□ 1.28
MAP1LC3B-206ENST00000564844 OVOS2A0A0G2JMS6 1433 aa23.04■■□□□ 1.28
MAP1LC3B-206ENST00000564844 C4AP0C0L4 1744 aa23.04■■□□□ 1.28
MAP1LC3B-206ENST00000564844 C4BP0C0L5 1744 aa23.04■■□□□ 1.28
MAP1LC3B-206ENST00000564844 EXOC5O00471 708 aa23.04■■□□□ 1.28
MAP1LC3B-206ENST00000564844 BCAS4Q8TDM0 211 aa23.04■■□□□ 1.28
MAP1LC3B-206ENST00000564844 PP2D1A8MPX8 630 aa23.03■■□□□ 1.28
MAP1LC3B-206ENST00000564844 IDEP14735 1019 aa23.03■■□□□ 1.28
MAP1LC3B-206ENST00000564844 ATF3P18847 181 aa23.03■■□□□ 1.28
MAP1LC3B-206ENST00000564844 ATP1A2P50993 1020 aa23.03■■□□□ 1.28
MAP1LC3B-206ENST00000564844 EIF5P55010 431 aaKnown RBP23.03■■□□□ 1.28
MAP1LC3B-206ENST00000564844 UBE3CQ15386 1083 aa23.03■■□□□ 1.28
MAP1LC3B-206ENST00000564844 TRAPPC11Q7Z392 1133 aa23.03■■□□□ 1.28
MAP1LC3B-206ENST00000564844 ANKRD13CQ8N6S4 541 aa23.03■■□□□ 1.28
MAP1LC3B-206ENST00000564844 ANKRD20A12PQ8NF67 263 aa23.03■■□□□ 1.28
MAP1LC3B-206ENST00000564844 COG1Q8WTW3 980 aa23.03■■□□□ 1.28
MAP1LC3B-206ENST00000564844 EVX2Q03828 476 aa23.03■■□□□ 1.28
MAP1LC3B-206ENST00000564844 ZNF579Q8NAF0 562 aaKnown RBP23.03■■□□□ 1.28
MAP1LC3B-206ENST00000564844 GSDMAQ96QA5 445 aa23.03■■□□□ 1.28
MAP1LC3B-206ENST00000564844 AATFQ9NY61 560 aaKnown RBP eCLIP23.03■■□□□ 1.28
MAP1LC3B-206ENST00000564844 MYO5AQ9Y4I1 1855 aaKnown RBP23.03■■□□□ 1.28
MAP1LC3B-206ENST00000564844 FER1L4A9Z1Z3 1794 aa23.03■■□□□ 1.28
MAP1LC3B-206ENST00000564844 ARFGEF2Q9Y6D5 1785 aa23.03■■□□□ 1.28
MAP1LC3B-206ENST00000564844 AGPSO00116 658 aa23.02■■□□□ 1.28
MAP1LC3B-206ENST00000564844 KRT2P35908 639 aa23.02■■□□□ 1.28
MAP1LC3B-206ENST00000564844 RASGRF1Q13972 1273 aa23.02■■□□□ 1.28
MAP1LC3B-206ENST00000564844 FAM76AQ8TAV0 307 aa23.02■■□□□ 1.28
MAP1LC3B-206ENST00000564844 DEF6Q9H4E7 631 aa23.02■■□□□ 1.28
MAP1LC3B-206ENST00000564844 CDHR2Q9BYE9 1310 aa23.02■■□□□ 1.28
MAP1LC3B-206ENST00000564844 TCRBV5S4A2TA0A5A2 114 aa23.02■■□□□ 1.28
MAP1LC3B-206ENST00000564844 B4DLN1 442 aa23.02■■□□□ 1.28
MAP1LC3B-206ENST00000564844 KAT2BQ92831 832 aa23.02■■□□□ 1.28
MAP1LC3B-206ENST00000564844 TRMT112Q9UI30 125 aaKnown RBP23.02■■□□□ 1.28
MAP1LC3B-206ENST00000564844 ASAP1Q9ULH1 1129 aa23.02■■□□□ 1.28
MAP1LC3B-206ENST00000564844 TNKSO95271 1327 aa23.02■■□□□ 1.28
MAP1LC3B-206ENST00000564844 ANKRD18BA2A2Z9 1011 aa23.02■■□□□ 1.28
MAP1LC3B-206ENST00000564844 GOLGA6BA6NDN3 693 aa23.02■■□□□ 1.28
MAP1LC3B-206ENST00000564844 NKRFO15226 690 aaKnown RBP eCLIP23.02■■□□□ 1.283e-6■■□□□ 12.3
MAP1LC3B-206ENST00000564844 PARP1P09874 1014 aaKnown RBP23.02■■□□□ 1.28
MAP1LC3B-206ENST00000564844 OR8K1Q8NGG5 319 aa23.02■■□□□ 1.28
MAP1LC3B-206ENST00000564844 RASGRP4Q8TDF6 673 aa23.02■■□□□ 1.28
MAP1LC3B-206ENST00000564844 TTC38Q5R3I4 469 aa23.01■■□□□ 1.27
MAP1LC3B-206ENST00000564844 TADA2BQ86TJ2 420 aa23.01■■□□□ 1.27
MAP1LC3B-206ENST00000564844 SPATA5Q8NB90 893 aa23.01■■□□□ 1.27
MAP1LC3B-206ENST00000564844 DMGDHQ9UI17 866 aaKnown RBP23.01■■□□□ 1.27
MAP1LC3B-206ENST00000564844 ZEB2O60315 1214 aa23.01■■□□□ 1.27
MAP1LC3B-206ENST00000564844 PLEKP08567 350 aaPredicted RBP23.01■■□□□ 1.27
MAP1LC3B-206ENST00000564844 TRIM21P19474 475 aaKnown RBP23.01■■□□□ 1.27
MAP1LC3B-206ENST00000564844 BCAMP50895 628 aa23.01■■□□□ 1.27
MAP1LC3B-206ENST00000564844 WDR93Q6P2C0 686 aa23.01■■□□□ 1.27
MAP1LC3B-206ENST00000564844 ISCA1Q9BUE6 129 aa23.01■■□□□ 1.27
MAP1LC3B-206ENST00000564844 LRP2BPQ9P2M1 347 aa23.01■■□□□ 1.27
MAP1LC3B-206ENST00000564844 PDE8BO95263 885 aa23■■□□□ 1.27
MAP1LC3B-206ENST00000564844 WDR59Q6PJI9 974 aa23■■□□□ 1.27
MAP1LC3B-206ENST00000564844 SH2D3CQ8N5H7 860 aa23■■□□□ 1.27
MAP1LC3B-206ENST00000564844 KRT23Q9C075 422 aa23■■□□□ 1.27
MAP1LC3B-206ENST00000564844 IRAK1P51617 712 aa23■■□□□ 1.27
MAP1LC3B-206ENST00000564844 GNGT1P63211 74 aa23■■□□□ 1.27
MAP1LC3B-206ENST00000564844 MAP3K12Q12852 859 aa23■■□□□ 1.27
MAP1LC3B-206ENST00000564844 SH3RF1Q7Z6J0 888 aa23■■□□□ 1.27
MAP1LC3B-206ENST00000564844 NMT2O60551 498 aa23■■□□□ 1.27
MAP1LC3B-206ENST00000564844 MNAT1P51948 309 aa23■■□□□ 1.27
MAP1LC3B-206ENST00000564844 PKN1Q16512 942 aa23■■□□□ 1.27
MAP1LC3B-206ENST00000564844 ZCRB1Q8TBF4 217 aaKnown RBP23■■□□□ 1.27
MAP1LC3B-206ENST00000564844 LRRC1Q9BTT6 524 aa23■■□□□ 1.27
MAP1LC3B-206ENST00000564844 FAM169AQ9Y6X4 670 aa23■■□□□ 1.27
MAP1LC3B-206ENST00000564844 STK36Q9NRP7 1315 aa22.99■■□□□ 1.27
MAP1LC3B-206ENST00000564844 ARHGAP23Q9P227 1491 aa22.99■■□□□ 1.27
MAP1LC3B-206ENST00000564844 IRS4O14654 1257 aaPredicted RBP22.99■■□□□ 1.27
MAP1LC3B-206ENST00000564844 CCDC51Q96ER9 411 aa22.99■■□□□ 1.27
MAP1LC3B-206ENST00000564844 TRIM47Q96LD4 638 aa22.99■■□□□ 1.27
MAP1LC3B-206ENST00000564844 FAM107BQ9H098 131 aa22.99■■□□□ 1.27
MAP1LC3B-206ENST00000564844 ERLIN2O94905 339 aa22.99■■□□□ 1.27
MAP1LC3B-206ENST00000564844 RNASE9P60153 205 aaKnown RBP22.99■■□□□ 1.27
MAP1LC3B-206ENST00000564844 IL17AQ16552 155 aa22.99■■□□□ 1.27
MAP1LC3B-206ENST00000564844 MAP9Q49MG5 647 aa22.99■■□□□ 1.27
MAP1LC3B-206ENST00000564844 KIF6Q6ZMV9 814 aa22.99■■□□□ 1.27
MAP1LC3B-206ENST00000564844 IRF2BP1Q8IU81 584 aa22.99■■□□□ 1.27
MAP1LC3B-206ENST00000564844 RPS6KA5O75582 802 aa22.98■■□□□ 1.27
MAP1LC3B-206ENST00000564844 LIMA1Q9UHB6 759 aaKnown RBP22.98■■□□□ 1.27
MAP1LC3B-206ENST00000564844 CCDC196A0A1B0GTZ2 297 aa22.98■■□□□ 1.27
MAP1LC3B-206ENST00000564844 WTIPA6NIX2 430 aaPredicted RBP22.98■■□□□ 1.27
MAP1LC3B-206ENST00000564844 SOS2Q07890 1332 aaPredicted RBP22.98■■□□□ 1.27
MAP1LC3B-206ENST00000564844 ZC3H4Q9UPT8 1303 aaKnown RBP22.98■■□□□ 1.27
MAP1LC3B-206ENST00000564844 EBAG9O00559 213 aa22.97■■□□□ 1.27
MAP1LC3B-206ENST00000564844 XBP1P17861 261 aa22.97■■□□□ 1.27
MAP1LC3B-206ENST00000564844 PDCLQ13371 301 aa22.97■■□□□ 1.27
MAP1LC3B-206ENST00000564844 CCDC96Q2M329 555 aa22.97■■□□□ 1.27
MAP1LC3B-206ENST00000564844 CCNI2Q6ZMN8 369 aaPredicted RBP22.97■■□□□ 1.27
MAP1LC3B-206ENST00000564844 ELOA2Q8IYF1 753 aaPredicted RBP22.97■■□□□ 1.27
MAP1LC3B-206ENST00000564844 ARL8AQ96BM9 186 aa22.97■■□□□ 1.27
MAP1LC3B-206ENST00000564844 MLXIPQ9HAP2 919 aa22.97■■□□□ 1.27
MAP1LC3B-206ENST00000564844 RPN1P04843 607 aaKnown RBP22.97■■□□□ 1.27
MAP1LC3B-206ENST00000564844 TUBB2AQ13885 445 aa22.97■■□□□ 1.27
MAP1LC3B-206ENST00000564844 ZBTB38Q8NAP3 1195 aaPredicted RBP22.97■■□□□ 1.27
MAP1LC3B-206ENST00000564844 TUBB2BQ9BVA1 445 aa22.97■■□□□ 1.27
MAP1LC3B-206ENST00000564844 LRWD1Q9UFC0 647 aa22.97■■□□□ 1.27
MAP1LC3B-206ENST00000564844 SIPA1L3O60292 1781 aaPredicted RBP22.97■■□□□ 1.27
MAP1LC3B-206ENST00000564844 NCK2O43639 380 aa22.97■■□□□ 1.27
MAP1LC3B-206ENST00000564844 ATP2B2Q01814 1243 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms