RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 B4E1Z4 1266 aa18.3■□□□□ 0.52
LINC00554-201ENST00000564841 NDUFAB1O14561 156 aa18.3■□□□□ 0.52
LINC00554-201ENST00000564841 SARSP49591 514 aaKnown RBP18.3■□□□□ 0.52
LINC00554-201ENST00000564841 PPP2R5AQ15172 486 aa18.3■□□□□ 0.52
LINC00554-201ENST00000564841 RRP12Q5JTH9 1297 aaKnown RBP18.3■□□□□ 0.52
LINC00554-201ENST00000564841 TRAPPC11Q7Z392 1133 aa18.3■□□□□ 0.52
LINC00554-201ENST00000564841 MB21D2Q8IYB1 491 aaPredicted RBP18.3■□□□□ 0.52
LINC00554-201ENST00000564841 KRI1Q8N9T8 703 aaKnown RBP18.3■□□□□ 0.52
LINC00554-201ENST00000564841 PRPF38AQ8NAV1 312 aaKnown RBP18.3■□□□□ 0.52
LINC00554-201ENST00000564841 WWC3Q9ULE0 1092 aa18.3■□□□□ 0.52
LINC00554-201ENST00000564841 WTIPA6NIX2 430 aaPredicted RBP18.29■□□□□ 0.52
LINC00554-201ENST00000564841 ZNF213O14771 459 aa18.29■□□□□ 0.52
LINC00554-201ENST00000564841 MYO1BO43795 1136 aa18.29■□□□□ 0.52
LINC00554-201ENST00000564841 TOB1P50616 345 aaPredicted RBP18.29■□□□□ 0.52
LINC00554-201ENST00000564841 SLC7A5Q01650 507 aa18.29■□□□□ 0.52
LINC00554-201ENST00000564841 ZKSCAN4Q969J2 545 aaPredicted RBP18.29■□□□□ 0.52
LINC00554-201ENST00000564841 MATR3P43243 847 aaKnown RBP eCLIP18.29■□□□□ 0.52
LINC00554-201ENST00000564841 PHKA1P46020 1223 aa18.29■□□□□ 0.52
LINC00554-201ENST00000564841 PLCD1P51178 756 aa18.29■□□□□ 0.52
LINC00554-201ENST00000564841 TRDNQ13061 729 aa18.29■□□□□ 0.52
LINC00554-201ENST00000564841 CCNI2Q6ZMN8 369 aaPredicted RBP18.29■□□□□ 0.52
LINC00554-201ENST00000564841 CYB5R4Q7L1T6 521 aa18.29■□□□□ 0.52
LINC00554-201ENST00000564841 ANKRD18AQ8IVF6 992 aa18.29■□□□□ 0.52
LINC00554-201ENST00000564841 LINC00116Q8NCU8 138 aa18.29■□□□□ 0.52
LINC00554-201ENST00000564841 FAM107BQ9H098 131 aa18.29■□□□□ 0.52
LINC00554-201ENST00000564841 ABHD10Q9NUJ1 306 aa18.29■□□□□ 0.52
LINC00554-201ENST00000564841 RIPOR2Q9Y4F9 1068 aa18.29■□□□□ 0.52
LINC00554-201ENST00000564841 DUSP10Q9Y6W6 482 aa18.29■□□□□ 0.52
LINC00554-201ENST00000564841 AHDC1Q5TGY3 1603 aaPredicted RBP18.28■□□□□ 0.52
LINC00554-201ENST00000564841 FAM237AA0A1B0GTK4 181 aa18.28■□□□□ 0.52
LINC00554-201ENST00000564841 CIAO1O76071 339 aa18.28■□□□□ 0.52
LINC00554-201ENST00000564841 GUCY1A2P33402 732 aa18.28■□□□□ 0.52
LINC00554-201ENST00000564841 PPFIA1Q13136 1202 aa18.28■□□□□ 0.52
LINC00554-201ENST00000564841 CABS1Q96KC9 395 aa18.28■□□□□ 0.52
LINC00554-201ENST00000564841 SMARCAL1Q9NZC9 954 aa18.28■□□□□ 0.52
LINC00554-201ENST00000564841 SRP68Q9UHB9 627 aaKnown RBP18.28■□□□□ 0.52
LINC00554-201ENST00000564841 A0A087X0B3 334 aa18.28■□□□□ 0.52
LINC00554-201ENST00000564841 ZNF34Q8IZ26 560 aa18.28■□□□□ 0.52
LINC00554-201ENST00000564841 OTUD6BQ8N6M0 293 aa18.28■□□□□ 0.52
LINC00554-201ENST00000564841 GIMAP7Q8NHV1 300 aa18.28■□□□□ 0.52
LINC00554-201ENST00000564841 NAA15Q9BXJ9 866 aaKnown RBP18.28■□□□□ 0.52
LINC00554-201ENST00000564841 GNL3LQ9NVN8 582 aaKnown RBP18.28■□□□□ 0.52
LINC00554-201ENST00000564841 TAB2Q9NYJ8 693 aa18.28■□□□□ 0.52
LINC00554-201ENST00000564841 MYH8P13535 1937 aa18.28■□□□□ 0.52
LINC00554-201ENST00000564841 SSBP05455 408 aaKnown RBP eCLIP18.28■□□□□ 0.52
LINC00554-201ENST00000564841 KRT9P35527 623 aa18.28■□□□□ 0.52
LINC00554-201ENST00000564841 NFXL1Q6ZNB6 911 aa18.28■□□□□ 0.52
LINC00554-201ENST00000564841 TBC1D10CQ8IV04 446 aa18.28■□□□□ 0.52
LINC00554-201ENST00000564841 GPIHBP1Q8IV16 184 aa18.28■□□□□ 0.52
LINC00554-201ENST00000564841 CAGE1Q8TC20 777 aa18.28■□□□□ 0.52
LINC00554-201ENST00000564841 SLC24A3Q9HC58 644 aa18.28■□□□□ 0.52
LINC00554-201ENST00000564841 DMGDHQ9UI17 866 aaKnown RBP18.28■□□□□ 0.52
LINC00554-201ENST00000564841 PCDHB6Q9Y5E3 794 aa18.28■□□□□ 0.52
LINC00554-201ENST00000564841 SAR1BQ9Y6B6 198 aa18.28■□□□□ 0.52
LINC00554-201ENST00000564841 ZMYM6O95789 1325 aa18.28■□□□□ 0.52
LINC00554-201ENST00000564841 RANBP6O60518 1105 aaKnown RBP18.27■□□□□ 0.52
LINC00554-201ENST00000564841 MCAMP43121 646 aa18.27■□□□□ 0.52
LINC00554-201ENST00000564841 DOT1LQ8TEK3 1739 aa18.27■□□□□ 0.52
LINC00554-201ENST00000564841 AIDAQ96BJ3 306 aa18.27■□□□□ 0.52
LINC00554-201ENST00000564841 NUP188Q5SRE5 1749 aa18.27■□□□□ 0.52
LINC00554-201ENST00000564841 N4BP3O15049 544 aa18.27■□□□□ 0.51
LINC00554-201ENST00000564841 CAMTA2O94983 1202 aa18.27■□□□□ 0.51
LINC00554-201ENST00000564841 METAP2P50579 478 aaKnown RBP eCLIP18.27■□□□□ 0.51
LINC00554-201ENST00000564841 TTMPQ5BVD1 217 aa18.27■□□□□ 0.51
LINC00554-201ENST00000564841 RNF187Q5TA31 235 aaPredicted RBP18.27■□□□□ 0.51
LINC00554-201ENST00000564841 TSEN2Q8NCE0 465 aaKnown RBP18.27■□□□□ 0.51
LINC00554-201ENST00000564841 N4BP2L2Q92802 583 aaPredicted RBP18.27■□□□□ 0.51
LINC00554-201ENST00000564841 PSMB7Q99436 277 aa18.27■□□□□ 0.51
LINC00554-201ENST00000564841 MAPK8IP1Q9UQF2 711 aa18.27■□□□□ 0.51
LINC00554-201ENST00000564841 SYNRGQ9UMZ2 1314 aa18.26■□□□□ 0.51
LINC00554-201ENST00000564841 APBA1Q02410 837 aa18.26■□□□□ 0.51
LINC00554-201ENST00000564841 CTDSPL2Q05D32 466 aa18.26■□□□□ 0.51
LINC00554-201ENST00000564841 NR5A1Q13285 461 aa18.26■□□□□ 0.51
LINC00554-201ENST00000564841 TUBB2AQ13885 445 aa18.26■□□□□ 0.51
LINC00554-201ENST00000564841 RPAINQ86UA6 219 aa18.26■□□□□ 0.51
LINC00554-201ENST00000564841 TUBB2BQ9BVA1 445 aa18.26■□□□□ 0.51
LINC00554-201ENST00000564841 TJP1Q07157 1748 aa18.26■□□□□ 0.51
LINC00554-201ENST00000564841 PAX7P23759 505 aa18.26■□□□□ 0.51
LINC00554-201ENST00000564841 CNGA4Q8IV77 575 aa18.26■□□□□ 0.51
LINC00554-201ENST00000564841 ZNF622Q969S3 477 aaKnown RBP eCLIP18.26■□□□□ 0.51
LINC00554-201ENST00000564841 EPSTI1Q96J88 318 aa18.26■□□□□ 0.51
LINC00554-201ENST00000564841 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.26■□□□□ 0.51
LINC00554-201ENST00000564841 PAPPAQ13219 1627 aa18.26■□□□□ 0.51
LINC00554-201ENST00000564841 RCCD1A6NED2 376 aa18.25■□□□□ 0.51
LINC00554-201ENST00000564841 ERVV-1B6SEH8 477 aa18.25■□□□□ 0.51
LINC00554-201ENST00000564841 ACTN4O43707 911 aaKnown RBP18.25■□□□□ 0.51
LINC00554-201ENST00000564841 SEC24CP53992 1094 aa18.25■□□□□ 0.51
LINC00554-201ENST00000564841 GUCY1A3Q02108 690 aa18.25■□□□□ 0.51
LINC00554-201ENST00000564841 KCTD19Q17RG1 926 aaPredicted RBP18.25■□□□□ 0.51
LINC00554-201ENST00000564841 SPATA1Q5VX52 437 aa18.25■□□□□ 0.51
LINC00554-201ENST00000564841 POTEDQ86YR6 584 aa18.25■□□□□ 0.51
LINC00554-201ENST00000564841 TMTC1Q8IUR5 882 aa18.25■□□□□ 0.51
LINC00554-201ENST00000564841 JAKMIP2Q96AA8 810 aa18.25■□□□□ 0.51
LINC00554-201ENST00000564841 EHD2Q9NZN4 543 aa18.25■□□□□ 0.51
LINC00554-201ENST00000564841 FBXO2Q9UK22 296 aaPredicted RBP18.25■□□□□ 0.51
LINC00554-201ENST00000564841 EPN1Q9Y6I3 576 aaPredicted RBP18.25■□□□□ 0.51
LINC00554-201ENST00000564841 hCG_1642624A0A1W2PR95 340 aa18.25■□□□□ 0.51
LINC00554-201ENST00000564841 GNPATO15228 680 aa18.25■□□□□ 0.51
LINC00554-201ENST00000564841 PDE8BO95263 885 aa18.25■□□□□ 0.51
LINC00554-201ENST00000564841 USP8P40818 1118 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms