RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 LACTBP83111 547 aaPredicted RBP18.75■□□□□ 0.59
RAB40C-208ENST00000564703 TSGA10IPQ3SY00 556 aa18.75■□□□□ 0.59
RAB40C-208ENST00000564703 STOX1Q6ZVD7 989 aa18.75■□□□□ 0.59
RAB40C-208ENST00000564703 CYB5R4Q7L1T6 521 aa18.75■□□□□ 0.59
RAB40C-208ENST00000564703 PRPF38AQ8NAV1 312 aaKnown RBP18.75■□□□□ 0.59
RAB40C-208ENST00000564703 CD99L2Q8TCZ2 262 aa18.75■□□□□ 0.59
RAB40C-208ENST00000564703 ANKS1AQ92625 1134 aa18.75■□□□□ 0.59
RAB40C-208ENST00000564703 GMCL1Q96IK5 515 aa18.75■□□□□ 0.59
RAB40C-208ENST00000564703 NEK1Q96PY6 1258 aa18.75■□□□□ 0.59
RAB40C-208ENST00000564703 NUP88Q99567 741 aaPredicted RBP18.75■□□□□ 0.59
RAB40C-208ENST00000564703 FEM1BQ9UK73 627 aa18.75■□□□□ 0.59
RAB40C-208ENST00000564703 TAF6LQ9Y6J9 622 aa18.75■□□□□ 0.59
RAB40C-208ENST00000564703 MYPNQ86TC9 1320 aa18.74■□□□□ 0.59
RAB40C-208ENST00000564703 ADGRA2Q96PE1 1338 aa18.74■□□□□ 0.59
RAB40C-208ENST00000564703 ECM2O94769 699 aaPredicted RBP18.74■□□□□ 0.59
RAB40C-208ENST00000564703 HMGB1P09429 215 aaKnown RBP18.74■□□□□ 0.59
RAB40C-208ENST00000564703 PSMC4P43686 418 aa18.74■□□□□ 0.59
RAB40C-208ENST00000564703 FCGRTP55899 365 aa18.74■□□□□ 0.59
RAB40C-208ENST00000564703 CCNA1P78396 465 aa18.74■□□□□ 0.59
RAB40C-208ENST00000564703 CCDC96Q2M329 555 aa18.74■□□□□ 0.59
RAB40C-208ENST00000564703 CHST3Q7LGC8 479 aa18.74■□□□□ 0.59
RAB40C-208ENST00000564703 CTU1Q7Z7A3 348 aaKnown RBP18.74■□□□□ 0.59
RAB40C-208ENST00000564703 TMTC2Q8N394 836 aa18.74■□□□□ 0.59
RAB40C-208ENST00000564703 MB21D1Q8N884 522 aa18.74■□□□□ 0.59
RAB40C-208ENST00000564703 ENAHQ8N8S7 591 aaPredicted RBP18.74■□□□□ 0.59
RAB40C-208ENST00000564703 NKX2-3Q8TAU0 364 aa18.74■□□□□ 0.59
RAB40C-208ENST00000564703 DCAF4Q8WV16 495 aa18.74■□□□□ 0.59
RAB40C-208ENST00000564703 USP26Q9BXU7 913 aa18.74■□□□□ 0.59
RAB40C-208ENST00000564703 EFCC1Q9HA90 598 aa18.74■□□□□ 0.59
RAB40C-208ENST00000564703 RBPJLQ9UBG7 517 aa18.74■□□□□ 0.59
RAB40C-208ENST00000564703 SPDYE16A6NNV3 312 aaPredicted RBP18.73■□□□□ 0.59
RAB40C-208ENST00000564703 TMEM232C9JQI7 657 aa18.73■□□□□ 0.59
RAB40C-208ENST00000564703 GNRH1P01148 92 aa18.73■□□□□ 0.59
RAB40C-208ENST00000564703 WTAPQ15007 396 aa18.73■□□□□ 0.59
RAB40C-208ENST00000564703 TMEM67Q5HYA8 995 aa18.73■□□□□ 0.59
RAB40C-208ENST00000564703 LBX2Q6XYB7 198 aa18.73■□□□□ 0.59
RAB40C-208ENST00000564703 FAM160B2Q86V87 743 aa18.73■□□□□ 0.59
RAB40C-208ENST00000564703 PNMA1Q8ND90 353 aa18.73■□□□□ 0.59
RAB40C-208ENST00000564703 SLF1Q9BQI6 1058 aa18.73■□□□□ 0.59
RAB40C-208ENST00000564703 MTA3Q9BTC8 594 aa18.73■□□□□ 0.59
RAB40C-208ENST00000564703 CWC22Q9HCG8 908 aaKnown RBP18.73■□□□□ 0.59
RAB40C-208ENST00000564703 MORF4L1Q9UBU8 362 aa18.73■□□□□ 0.59
RAB40C-208ENST00000564703 PPP1R9AQ9ULJ8 1098 aa18.73■□□□□ 0.59
RAB40C-208ENST00000564703 TRIM17Q9Y577 477 aa18.73■□□□□ 0.59
RAB40C-208ENST00000564703 PRC1O43663 620 aa18.72■□□□□ 0.59
RAB40C-208ENST00000564703 ZBED4O75132 1171 aa18.72■□□□□ 0.59
RAB40C-208ENST00000564703 PSMA5P28066 241 aa18.72■□□□□ 0.59
RAB40C-208ENST00000564703 STAT2P52630 851 aa18.72■□□□□ 0.59
RAB40C-208ENST00000564703 PLS1Q14651 629 aa18.72■□□□□ 0.59
RAB40C-208ENST00000564703 PKN2Q16513 984 aaKnown RBP18.72■□□□□ 0.59
RAB40C-208ENST00000564703 MB21D2Q8IYB1 491 aaPredicted RBP18.72■□□□□ 0.59
RAB40C-208ENST00000564703 RASEFQ8IZ41 740 aa18.72■□□□□ 0.59
RAB40C-208ENST00000564703 KIFC2Q96AC6 838 aa18.72■□□□□ 0.59
RAB40C-208ENST00000564703 TMEM87BQ96K49 555 aa18.72■□□□□ 0.59
RAB40C-208ENST00000564703 FBXO28Q9NVF7 368 aa18.72■□□□□ 0.59
RAB40C-208ENST00000564703 FDX1P10109 184 aa18.71■□□□□ 0.59
RAB40C-208ENST00000564703 ERVK-9P63128 1117 aa18.71■□□□□ 0.59
RAB40C-208ENST00000564703 ERVK-24P63145 666 aa18.71■□□□□ 0.59
RAB40C-208ENST00000564703 SEC23AQ15436 765 aa18.71■□□□□ 0.59
RAB40C-208ENST00000564703 Q3C1V9 767 aa18.71■□□□□ 0.59
RAB40C-208ENST00000564703 COL13A1Q5TAT6 717 aaPredicted RBP18.71■□□□□ 0.59
RAB40C-208ENST00000564703 NFXL1Q6ZNB6 911 aa18.71■□□□□ 0.59
RAB40C-208ENST00000564703 KCTD1Q719H9 257 aa18.71■□□□□ 0.59
RAB40C-208ENST00000564703 DHX32Q7L7V1 743 aaKnown RBP18.71■□□□□ 0.59
RAB40C-208ENST00000564703 COA7Q96BR5 231 aa18.71■□□□□ 0.59
RAB40C-208ENST00000564703 ATG4CQ96DT6 458 aa18.71■□□□□ 0.59
RAB40C-208ENST00000564703 TXNRD2Q9NNW7 524 aa18.71■□□□□ 0.59
RAB40C-208ENST00000564703 VWA5AO00534 786 aa18.7■□□□□ 0.58
RAB40C-208ENST00000564703 TNPO2O14787 897 aaKnown RBP18.7■□□□□ 0.58
RAB40C-208ENST00000564703 FGD1P98174 961 aa18.7■□□□□ 0.58
RAB40C-208ENST00000564703 GPATCH4Q5T3I0 446 aaKnown RBP18.7■□□□□ 0.58
RAB40C-208ENST00000564703 CATIPQ7Z7H3 387 aa18.7■□□□□ 0.58
RAB40C-208ENST00000564703 IGDCC4Q8TDY8 1250 aa18.7■□□□□ 0.58
RAB40C-208ENST00000564703 KCNB2Q92953 911 aa18.7■□□□□ 0.58
RAB40C-208ENST00000564703 GPCPD1Q9NPB8 672 aa18.7■□□□□ 0.58
RAB40C-208ENST00000564703 SNX14Q9Y5W7 946 aa18.7■□□□□ 0.58
RAB40C-208ENST00000564703 CCDC69A6NI79 296 aa18.69■□□□□ 0.58
RAB40C-208ENST00000564703 PLA2G6O60733 806 aa18.69■□□□□ 0.58
RAB40C-208ENST00000564703 PDHBP11177 359 aa18.69■□□□□ 0.58
RAB40C-208ENST00000564703 MAPK4P31152 587 aa18.69■□□□□ 0.58
RAB40C-208ENST00000564703 PRMT2P55345 433 aa18.69■□□□□ 0.58
RAB40C-208ENST00000564703 WDR78Q5VTH9 848 aa18.69■□□□□ 0.58
RAB40C-208ENST00000564703 OTOP1Q7RTM1 612 aa18.69■□□□□ 0.58
RAB40C-208ENST00000564703 JAKMIP1Q96N16 626 aaKnown RBP18.69■□□□□ 0.58
RAB40C-208ENST00000564703 ARHGAP39Q9C0H5 1083 aa18.69■□□□□ 0.58
RAB40C-208ENST00000564703 BTBD7Q9P203 1132 aa18.69■□□□□ 0.58
RAB40C-208ENST00000564703 ADAMTS5Q9UNA0 930 aa18.69■□□□□ 0.58
RAB40C-208ENST00000564703 FRMPD2Q68DX3 1309 aaPredicted RBP18.69■□□□□ 0.58
RAB40C-208ENST00000564703 PEX10O60683 326 aa18.68■□□□□ 0.58
RAB40C-208ENST00000564703 PARP1P09874 1014 aaKnown RBP18.68■□□□□ 0.58
RAB40C-208ENST00000564703 STAT3P40763 770 aa18.68■□□□□ 0.58
RAB40C-208ENST00000564703 ANTXR2P58335 489 aa18.68■□□□□ 0.58
RAB40C-208ENST00000564703 ZNF543Q08ER8 600 aa18.68■□□□□ 0.58
RAB40C-208ENST00000564703 ADCK5Q3MIX3 580 aa18.68■□□□□ 0.58
RAB40C-208ENST00000564703 BLOC1S2Q6QNY1 142 aa18.68■□□□□ 0.58
RAB40C-208ENST00000564703 SYNE3Q6ZMZ3 975 aa18.68■□□□□ 0.58
RAB40C-208ENST00000564703 TRIM47Q96LD4 638 aa18.68■□□□□ 0.58
RAB40C-208ENST00000564703 IVNS1ABPQ9Y6Y0 642 aa18.68■□□□□ 0.58
RAB40C-208ENST00000564703 CNMDO75829 334 aa18.67■□□□□ 0.58
RAB40C-208ENST00000564703 SLC25A27O95847 323 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms