RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 DCP1AQ9NPI6 582 aaPredicted RBP8.34□□□□□ -1.07
HERPUD1-209ENST00000564678 TFCP2L1Q9NZI6 479 aa8.34□□□□□ -1.07
HERPUD1-209ENST00000564678 KIAA1468Q9P260 1216 aa8.34□□□□□ -1.07
HERPUD1-209ENST00000564678 ANKIB1Q9P2G1 1089 aa8.34□□□□□ -1.07
HERPUD1-209ENST00000564678 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.34□□□□□ -1.07
HERPUD1-209ENST00000564678 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.34□□□□□ -1.072e-7■□□□□ 10.4
HERPUD1-209ENST00000564678 MYH2Q9UKX2 1941 aa8.34□□□□□ -1.07
HERPUD1-209ENST00000564678 A0A1B0GVL5 298 aa8.34□□□□□ -1.08
HERPUD1-209ENST00000564678 GOLGA6L19H0YKK7 550 aa8.34□□□□□ -1.08
HERPUD1-209ENST00000564678 AP5Z1O43299 807 aa8.34□□□□□ -1.08
HERPUD1-209ENST00000564678 CUTAO60888 179 aa8.34□□□□□ -1.08
HERPUD1-209ENST00000564678 DDAH1O94760 285 aa8.34□□□□□ -1.08
HERPUD1-209ENST00000564678 ZNF202O95125 648 aa8.34□□□□□ -1.08
HERPUD1-209ENST00000564678 LDHCP07864 332 aa8.34□□□□□ -1.08
HERPUD1-209ENST00000564678 KLRK1P26718 216 aa8.34□□□□□ -1.08
HERPUD1-209ENST00000564678 NDUFA8P51970 172 aa8.34□□□□□ -1.08
HERPUD1-209ENST00000564678 PPP4CP60510 307 aa8.34□□□□□ -1.08
HERPUD1-209ENST00000564678 AKAP17AQ02040 695 aaKnown RBP8.34□□□□□ -1.08
HERPUD1-209ENST00000564678 PDE4BQ07343 736 aa8.34□□□□□ -1.08
HERPUD1-209ENST00000564678 IFIT1BQ5T764 474 aaKnown RBP8.34□□□□□ -1.08
HERPUD1-209ENST00000564678 ZNF804AQ7Z570 1209 aa8.34□□□□□ -1.08
HERPUD1-209ENST00000564678 ENAHQ8N8S7 591 aaPredicted RBP8.34□□□□□ -1.08
HERPUD1-209ENST00000564678 CLP1Q92989 425 aaKnown RBP8.34□□□□□ -1.08
HERPUD1-209ENST00000564678 BPIFA3Q9BQP9 254 aa8.34□□□□□ -1.08
HERPUD1-209ENST00000564678 LRRC4BQ9NT99 713 aa8.34□□□□□ -1.08
HERPUD1-209ENST00000564678 CUEDC1Q9NWM3 386 aaPredicted RBP8.34□□□□□ -1.08
HERPUD1-209ENST00000564678 KIAA1551Q9HCM1 1747 aa8.33□□□□□ -1.08
HERPUD1-209ENST00000564678 hCG_2014768A0A024R1R8 64 aa8.33□□□□□ -1.08
HERPUD1-209ENST00000564678 SCAMP3O14828 347 aaKnown RBP8.33□□□□□ -1.08
HERPUD1-209ENST00000564678 PRPF3O43395 683 aaKnown RBP8.33□□□□□ -1.08
HERPUD1-209ENST00000564678 BBOX1O75936 387 aa8.33□□□□□ -1.08
HERPUD1-209ENST00000564678 LDHBP07195 334 aaKnown RBP8.33□□□□□ -1.08
HERPUD1-209ENST00000564678 PRDX5P30044 214 aa8.33□□□□□ -1.08
HERPUD1-209ENST00000564678 ST5P78524 1137 aa8.33□□□□□ -1.08
HERPUD1-209ENST00000564678 ZRSR1Q15695 479 aaKnown RBP8.33□□□□□ -1.08
HERPUD1-209ENST00000564678 CCDC178Q5BJE1 867 aa8.33□□□□□ -1.08
HERPUD1-209ENST00000564678 PRR5LQ6MZQ0 368 aa8.33□□□□□ -1.08
HERPUD1-209ENST00000564678 PLA2G4DQ86XP0 818 aa8.33□□□□□ -1.08
HERPUD1-209ENST00000564678 DZIP1Q86YF9 867 aaKnown RBP8.33□□□□□ -1.08
HERPUD1-209ENST00000564678 CEP57L1Q8IYX8 460 aa8.33□□□□□ -1.08
HERPUD1-209ENST00000564678 NUP133Q8WUM0 1156 aa8.33□□□□□ -1.08
HERPUD1-209ENST00000564678 FAM161BQ96MY7 647 aa8.33□□□□□ -1.08
HERPUD1-209ENST00000564678 NOL10Q9BSC4 688 aaKnown RBP8.33□□□□□ -1.08
HERPUD1-209ENST00000564678 AATFQ9NY61 560 aaKnown RBP eCLIP8.33□□□□□ -1.08
HERPUD1-209ENST00000564678 HPSEQ9Y251 543 aa8.33□□□□□ -1.08
HERPUD1-209ENST00000564678 DUOX1Q9NRD9 1551 aa8.33□□□□□ -1.08
HERPUD1-209ENST00000564678 BAZ2AQ9UIF9 1905 aaKnown RBP8.33□□□□□ -1.08
HERPUD1-209ENST00000564678 MAST2Q6P0Q8 1798 aa8.32□□□□□ -1.08
HERPUD1-209ENST00000564678 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.32□□□□□ -1.08
HERPUD1-209ENST00000564678 BECN2A8MW95 431 aa8.32□□□□□ -1.08
HERPUD1-209ENST00000564678 WDHD1O75717 1129 aaPredicted RBP8.32□□□□□ -1.08
HERPUD1-209ENST00000564678 BAG3O95817 575 aa8.32□□□□□ -1.08
HERPUD1-209ENST00000564678 GYS1P13807 737 aa8.32□□□□□ -1.08
HERPUD1-209ENST00000564678 CDC25BP30305 580 aa8.32□□□□□ -1.08
HERPUD1-209ENST00000564678 TNNI2P48788 182 aa8.32□□□□□ -1.08
HERPUD1-209ENST00000564678 TROAPQ12815 778 aa8.32□□□□□ -1.08
HERPUD1-209ENST00000564678 CHAF1AQ13111 956 aaPredicted RBP8.32□□□□□ -1.08
HERPUD1-209ENST00000564678 TMC4Q7Z404 712 aa8.32□□□□□ -1.08
HERPUD1-209ENST00000564678 TXNRD3Q86VQ6 643 aa8.32□□□□□ -1.08
HERPUD1-209ENST00000564678 DIS3L2Q8IYB7 885 aaKnown RBP8.32□□□□□ -1.08
HERPUD1-209ENST00000564678 PIBF1Q8WXW3 757 aa8.32□□□□□ -1.08
HERPUD1-209ENST00000564678 RPGRQ92834 1020 aaKnown RBP8.32□□□□□ -1.08
HERPUD1-209ENST00000564678 RBM17Q96I25 401 aaKnown RBP8.32□□□□□ -1.08
HERPUD1-209ENST00000564678 TRIM5Q9C035 493 aa8.32□□□□□ -1.08
HERPUD1-209ENST00000564678 CEP131Q9UPN4 1083 aa8.32□□□□□ -1.08
HERPUD1-209ENST00000564678 BTBD18B2RXH4 712 aa8.32□□□□□ -1.08
HERPUD1-209ENST00000564678 SERPINB2P05120 415 aa8.32□□□□□ -1.08
HERPUD1-209ENST00000564678 PFKFB1P16118 471 aa8.32□□□□□ -1.08
HERPUD1-209ENST00000564678 HOXA10P31260 410 aaPredicted RBP8.32□□□□□ -1.08
HERPUD1-209ENST00000564678 SOX11P35716 441 aa8.32□□□□□ -1.08
HERPUD1-209ENST00000564678 SYKP43405 635 aa8.32□□□□□ -1.08
HERPUD1-209ENST00000564678 FUT2Q10981 343 aa8.32□□□□□ -1.08
HERPUD1-209ENST00000564678 RESP18Q5W5W9 173 aa8.32□□□□□ -1.08
HERPUD1-209ENST00000564678 CCDC24Q8N4L8 307 aa8.32□□□□□ -1.08
HERPUD1-209ENST00000564678 TSC1Q92574 1164 aa8.32□□□□□ -1.08
HERPUD1-209ENST00000564678 MKRN1Q9UHC7 482 aaKnown RBP8.32□□□□□ -1.08
HERPUD1-209ENST00000564678 DLEC1Q9Y238 1755 aa8.32□□□□□ -1.08
HERPUD1-209ENST00000564678 UBR3Q6ZT12 1888 aa8.32□□□□□ -1.08
HERPUD1-209ENST00000564678 ECM29Q5VYK3 1845 aa8.31□□□□□ -1.08
HERPUD1-209ENST00000564678 MYH6P13533 1939 aa8.31□□□□□ -1.08
HERPUD1-209ENST00000564678 KLRG2A4D1S0 409 aaPredicted RBP8.31□□□□□ -1.08
HERPUD1-209ENST00000564678 MARCKSP29966 332 aaPredicted RBP8.31□□□□□ -1.08
HERPUD1-209ENST00000564678 GUCY1A2P33402 732 aa8.31□□□□□ -1.08
HERPUD1-209ENST00000564678 ZNF75DP51815 510 aa8.31□□□□□ -1.08
HERPUD1-209ENST00000564678 IGBP1P78318 339 aa8.31□□□□□ -1.08
HERPUD1-209ENST00000564678 DGKHQ86XP1 1220 aa8.31□□□□□ -1.08
HERPUD1-209ENST00000564678 AMOTL1Q8IY63 956 aa8.31□□□□□ -1.08
HERPUD1-209ENST00000564678 STK11IPQ8N1F8 1099 aa8.31□□□□□ -1.08
HERPUD1-209ENST00000564678 ANKS1AQ92625 1134 aa8.31□□□□□ -1.08
HERPUD1-209ENST00000564678 MRFAP1L1Q96HT8 127 aa8.31□□□□□ -1.08
HERPUD1-209ENST00000564678 ASB16Q96NS5 453 aa8.31□□□□□ -1.08
HERPUD1-209ENST00000564678 CRAMP1Q96RY5 1269 aa8.31□□□□□ -1.08
HERPUD1-209ENST00000564678 QTRT2Q9H974 415 aaKnown RBP8.31□□□□□ -1.08
HERPUD1-209ENST00000564678 TNRC6CQ9HCJ0 1690 aaKnown RBP8.31□□□□□ -1.08
HERPUD1-209ENST00000564678 BMP15O95972 392 aa8.31□□□□□ -1.08
HERPUD1-209ENST00000564678 IL1R1P14778 569 aa8.31□□□□□ -1.08
HERPUD1-209ENST00000564678 PTPREP23469 700 aa8.31□□□□□ -1.08
HERPUD1-209ENST00000564678 NLRP12P59046 1061 aa8.31□□□□□ -1.08
HERPUD1-209ENST00000564678 C12orf60Q5U649 245 aa8.31□□□□□ -1.08
HERPUD1-209ENST00000564678 SHC4Q6S5L8 630 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms