RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 NBPF11Q86T75 865 aa11.75□□□□□ -0.53
CDH1-206ENST00000564676 TBC1D10CQ8IV04 446 aa11.75□□□□□ -0.53
CDH1-206ENST00000564676 STAG1Q8WVM7 1258 aa11.75□□□□□ -0.53
CDH1-206ENST00000564676 MKL1Q969V6 931 aa11.75□□□□□ -0.53
CDH1-206ENST00000564676 ISY1Q9ULR0 285 aaKnown RBP11.75□□□□□ -0.53
CDH1-206ENST00000564676 GABRQQ9UN88 632 aa11.75□□□□□ -0.53
CDH1-206ENST00000564676 STX8Q9UNK0 236 aa11.75□□□□□ -0.53
CDH1-206ENST00000564676 GREB1LQ9C091 1923 aaPredicted RBP11.75□□□□□ -0.53
CDH1-206ENST00000564676 MYH4Q9Y623 1939 aa11.75□□□□□ -0.53
CDH1-206ENST00000564676 SGSM2O43147 1006 aa11.74□□□□□ -0.53
CDH1-206ENST00000564676 NMT2O60551 498 aa11.74□□□□□ -0.53
CDH1-206ENST00000564676 CNMDO75829 334 aa11.74□□□□□ -0.53
CDH1-206ENST00000564676 MAPK4P31152 587 aa11.74□□□□□ -0.53
CDH1-206ENST00000564676 BMP2KLQ5H9B9 411 aa11.74□□□□□ -0.53
CDH1-206ENST00000564676 WDR78Q5VTH9 848 aa11.74□□□□□ -0.53
CDH1-206ENST00000564676 SLFN13Q68D06 897 aa11.74□□□□□ -0.53
CDH1-206ENST00000564676 POTEEQ6S8J3 1075 aa11.74□□□□□ -0.53
CDH1-206ENST00000564676 LBX2Q6XYB7 198 aa11.74□□□□□ -0.53
CDH1-206ENST00000564676 ESR2Q92731 530 aa11.74□□□□□ -0.53
CDH1-206ENST00000564676 ATG4CQ96DT6 458 aa11.74□□□□□ -0.53
CDH1-206ENST00000564676 NUP88Q99567 741 aaPredicted RBP11.74□□□□□ -0.53
CDH1-206ENST00000564676 NBPF3Q9H094 633 aa11.74□□□□□ -0.53
CDH1-206ENST00000564676 IL17RBQ9NRM6 502 aa11.74□□□□□ -0.53
CDH1-206ENST00000564676 PPP4R2Q9NY27 417 aa11.74□□□□□ -0.53
CDH1-206ENST00000564676 BTBD7Q9P203 1132 aa11.74□□□□□ -0.53
CDH1-206ENST00000564676 BIN2Q9UBW5 565 aaPredicted RBP11.74□□□□□ -0.53
CDH1-206ENST00000564676 SYNPO2Q9UMS6 1093 aa11.74□□□□□ -0.53
CDH1-206ENST00000564676 MYCP01106 439 aaPredicted RBP11.73□□□□□ -0.53
CDH1-206ENST00000564676 GRK4P32298 578 aa11.73□□□□□ -0.53
CDH1-206ENST00000564676 SOX10P56693 466 aa11.73□□□□□ -0.53
CDH1-206ENST00000564676 PTH1RQ03431 593 aa11.73□□□□□ -0.53
CDH1-206ENST00000564676 PLS1Q14651 629 aa11.73□□□□□ -0.53
CDH1-206ENST00000564676 KIAA1211Q6ZU35 1233 aa11.73□□□□□ -0.53
CDH1-206ENST00000564676 MB21D1Q8N884 522 aa11.73□□□□□ -0.53
CDH1-206ENST00000564676 GMCL1P1Q8NEA9 526 aa11.73□□□□□ -0.53
CDH1-206ENST00000564676 SH3TC2Q8TF17 1288 aa11.73□□□□□ -0.53
CDH1-206ENST00000564676 ARMC5Q96C12 935 aa11.73□□□□□ -0.53
CDH1-206ENST00000564676 CHMP4CQ96CF2 233 aa11.73□□□□□ -0.53
CDH1-206ENST00000564676 PORCNQ9H237 461 aa11.73□□□□□ -0.53
CDH1-206ENST00000564676 FBXO28Q9NVF7 368 aa11.73□□□□□ -0.53
CDH1-206ENST00000564676 MTMR7Q9Y216 660 aa11.73□□□□□ -0.53
CDH1-206ENST00000564676 NEDD4P46934 1319 aa11.72□□□□□ -0.53
CDH1-206ENST00000564676 ADCY3O60266 1144 aa11.72□□□□□ -0.53
CDH1-206ENST00000564676 GABBR2O75899 941 aa11.72□□□□□ -0.53
CDH1-206ENST00000564676 BMP3P12645 472 aa11.72□□□□□ -0.53
CDH1-206ENST00000564676 SLC1A4P43007 532 aa11.72□□□□□ -0.53
CDH1-206ENST00000564676 IRF5Q13568 498 aa11.72□□□□□ -0.53
CDH1-206ENST00000564676 GPR142Q7Z601 462 aa11.72□□□□□ -0.53
CDH1-206ENST00000564676 PLEKHH3Q7Z736 793 aa11.72□□□□□ -0.53
CDH1-206ENST00000564676 NUDT12Q9BQG2 462 aa11.72□□□□□ -0.53
CDH1-206ENST00000564676 SLF1Q9BQI6 1058 aa11.72□□□□□ -0.53
CDH1-206ENST00000564676 TCP11L1Q9NUJ3 509 aa11.72□□□□□ -0.53
CDH1-206ENST00000564676 PPP1R9AQ9ULJ8 1098 aa11.72□□□□□ -0.53
CDH1-206ENST00000564676 CTDP1Q9Y5B0 961 aaPredicted RBP11.72□□□□□ -0.53
CDH1-206ENST00000564676 KIAA0100Q14667 2235 aaKnown RBP11.71□□□□□ -0.53
CDH1-206ENST00000564676 B4E1Z4 1266 aa11.71□□□□□ -0.53
CDH1-206ENST00000564676 KDM4AO75164 1064 aa11.71□□□□□ -0.53
CDH1-206ENST00000564676 TOP1P11387 765 aaKnown RBP11.71□□□□□ -0.53
CDH1-206ENST00000564676 CYP2B6P20813 491 aa11.71□□□□□ -0.53
CDH1-206ENST00000564676 MCCP23508 829 aa11.71□□□□□ -0.53
CDH1-206ENST00000564676 NT5C2P49902 561 aa11.71□□□□□ -0.53
CDH1-206ENST00000564676 UBXN2AP68543 259 aa11.71□□□□□ -0.53
CDH1-206ENST00000564676 CASC1Q6TDU7 716 aa11.71□□□□□ -0.53
CDH1-206ENST00000564676 IQCA1Q86XH1 822 aa11.71□□□□□ -0.53
CDH1-206ENST00000564676 SLAIN1Q8ND83 568 aa11.71□□□□□ -0.53
CDH1-206ENST00000564676 SOCS4Q8WXH5 440 aa11.71□□□□□ -0.53
CDH1-206ENST00000564676 ZNF333Q96JL9 665 aa11.71□□□□□ -0.53
CDH1-206ENST00000564676 ZKSCAN3Q9BRR0 538 aa11.71□□□□□ -0.53
CDH1-206ENST00000564676 ESYT1Q9BSJ8 1104 aa11.71□□□□□ -0.53
CDH1-206ENST00000564676 TMEM106CQ9BVX2 250 aa11.71□□□□□ -0.53
CDH1-206ENST00000564676 MOV10L1Q9BXT6 1211 aaKnown RBP11.71□□□□□ -0.53
CDH1-206ENST00000564676 KRT23Q9C075 422 aa11.71□□□□□ -0.53
CDH1-206ENST00000564676 SPATC1LQ9H0A9 340 aa11.71□□□□□ -0.53
CDH1-206ENST00000564676 CNNM2Q9H8M5 875 aa11.71□□□□□ -0.53
CDH1-206ENST00000564676 FEM1BQ9UK73 627 aa11.71□□□□□ -0.53
CDH1-206ENST00000564676 GJD2Q9UKL4 321 aa11.71□□□□□ -0.53
CDH1-206ENST00000564676 IVNS1ABPQ9Y6Y0 642 aa11.71□□□□□ -0.53
CDH1-206ENST00000564676 RLFQ13129 1914 aa11.7□□□□□ -0.54
CDH1-206ENST00000564676 TMEM232C9JQI7 657 aa11.7□□□□□ -0.54
CDH1-206ENST00000564676 VWA5AO00534 786 aa11.7□□□□□ -0.54
CDH1-206ENST00000564676 ZBED4O75132 1171 aa11.7□□□□□ -0.54
CDH1-206ENST00000564676 ELNP15502 786 aa11.7□□□□□ -0.54
CDH1-206ENST00000564676 ERCC3P19447 782 aa11.7□□□□□ -0.54
CDH1-206ENST00000564676 RGS2P41220 211 aa11.7□□□□□ -0.54
CDH1-206ENST00000564676 NOVP48745 357 aa11.7□□□□□ -0.54
CDH1-206ENST00000564676 TRDNQ13061 729 aa11.7□□□□□ -0.54
CDH1-206ENST00000564676 IKQ13123 557 aaPredicted RBP11.7□□□□□ -0.54
CDH1-206ENST00000564676 TMEM132BQ14DG7 1078 aa11.7□□□□□ -0.54
CDH1-206ENST00000564676 CCDC96Q2M329 555 aa11.7□□□□□ -0.54
CDH1-206ENST00000564676 CCDC178Q5BJE1 867 aa11.7□□□□□ -0.54
CDH1-206ENST00000564676 NCAPG2Q86XI2 1143 aa11.7□□□□□ -0.54
CDH1-206ENST00000564676 PRPF38AQ8NAV1 312 aaKnown RBP11.7□□□□□ -0.54
CDH1-206ENST00000564676 NKX2-3Q8TAU0 364 aa11.7□□□□□ -0.54
CDH1-206ENST00000564676 PXYLP1Q8TE99 480 aa11.7□□□□□ -0.54
CDH1-206ENST00000564676 CHURC1Q8WUH1 139 aa11.7□□□□□ -0.54
CDH1-206ENST00000564676 MAP4K1Q92918 833 aa11.7□□□□□ -0.54
CDH1-206ENST00000564676 KIFC2Q96AC6 838 aa11.7□□□□□ -0.54
CDH1-206ENST00000564676 TTC14Q96N46 770 aa11.7□□□□□ -0.54
CDH1-206ENST00000564676 TMEM47Q9BQJ4 181 aa11.7□□□□□ -0.54
CDH1-206ENST00000564676 ADAMTS5Q9UNA0 930 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms