RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 SYNPO2Q9UMS6 1093 aa21.74■■□□□ 1.07
SYNGR3-204ENST00000564642 NDUFB10O96000 172 aa21.73■■□□□ 1.07
SYNGR3-204ENST00000564642 XRCC5P13010 732 aaKnown RBP21.73■■□□□ 1.07
SYNGR3-204ENST00000564642 GSPT1P15170 499 aaKnown RBP21.73■■□□□ 1.07
SYNGR3-204ENST00000564642 RGS2P41220 211 aa21.73■■□□□ 1.07
SYNGR3-204ENST00000564642 HAND2P61296 217 aa21.73■■□□□ 1.07
SYNGR3-204ENST00000564642 RRP12Q5JTH9 1297 aaKnown RBP21.73■■□□□ 1.07
SYNGR3-204ENST00000564642 NKX2-3Q8TAU0 364 aa21.73■■□□□ 1.07
SYNGR3-204ENST00000564642 KIAA0100Q14667 2235 aaKnown RBP21.72■■□□□ 1.07
SYNGR3-204ENST00000564642 COL11A1P12107 1806 aaPredicted RBP21.72■■□□□ 1.07
SYNGR3-204ENST00000564642 ORC4O43929 436 aa21.72■■□□□ 1.07
SYNGR3-204ENST00000564642 HMGCRP04035 888 aa21.72■■□□□ 1.07
SYNGR3-204ENST00000564642 MORN1Q5T089 497 aa21.72■■□□□ 1.07
SYNGR3-204ENST00000564642 TRMT44Q8IYL2 757 aaKnown RBP21.72■■□□□ 1.07
SYNGR3-204ENST00000564642 LRRC47Q8N1G4 583 aaKnown RBP21.72■■□□□ 1.07
SYNGR3-204ENST00000564642 NUP88Q99567 741 aaPredicted RBP21.72■■□□□ 1.07
SYNGR3-204ENST00000564642 MOV10L1Q9BXT6 1211 aaKnown RBP21.72■■□□□ 1.07
SYNGR3-204ENST00000564642 UNC93B1Q9H1C4 597 aa21.72■■□□□ 1.07
SYNGR3-204ENST00000564642 FBXO28Q9NVF7 368 aa21.72■■□□□ 1.07
SYNGR3-204ENST00000564642 PPP1R9AQ9ULJ8 1098 aa21.72■■□□□ 1.07
SYNGR3-204ENST00000564642 CENPFP49454 3210 aa21.72■■□□□ 1.07
SYNGR3-204ENST00000564642 A0A0G2JMZ2 1700 aa21.72■■□□□ 1.07
SYNGR3-204ENST00000564642 SLC15A5A6NIM6 579 aa21.71■■□□□ 1.07
SYNGR3-204ENST00000564642 ZNF213O14771 459 aa21.71■■□□□ 1.07
SYNGR3-204ENST00000564642 GJB1P08034 283 aa21.71■■□□□ 1.07
SYNGR3-204ENST00000564642 FGRP09769 529 aa21.71■■□□□ 1.07
SYNGR3-204ENST00000564642 PTPREP23469 700 aa21.71■■□□□ 1.07
SYNGR3-204ENST00000564642 MFSD6Q6ZSS7 791 aa21.71■■□□□ 1.07
SYNGR3-204ENST00000564642 GMCL1P1Q8NEA9 526 aa21.71■■□□□ 1.07
SYNGR3-204ENST00000564642 USP6NLQ92738 828 aa21.71■■□□□ 1.07
SYNGR3-204ENST00000564642 ADAMTS5Q9UNA0 930 aa21.71■■□□□ 1.07
SYNGR3-204ENST00000564642 STX8Q9UNK0 236 aa21.71■■□□□ 1.07
SYNGR3-204ENST00000564642 TACC3Q9Y6A5 838 aa21.71■■□□□ 1.07
SYNGR3-204ENST00000564642 STRNO43815 780 aa21.7■■□□□ 1.06
SYNGR3-204ENST00000564642 PCP11498 1178 aaKnown RBP21.7■■□□□ 1.06
SYNGR3-204ENST00000564642 MAP2K5Q13163 448 aa21.7■■□□□ 1.06
SYNGR3-204ENST00000564642 AKNAD1Q5T1N1 836 aa21.7■■□□□ 1.06
SYNGR3-204ENST00000564642 SLFN13Q68D06 897 aa21.7■■□□□ 1.06
SYNGR3-204ENST00000564642 NCAPG2Q86XI2 1143 aa21.7■■□□□ 1.06
SYNGR3-204ENST00000564642 SHCBP1Q8NEM2 672 aa21.7■■□□□ 1.06
SYNGR3-204ENST00000564642 RUFY2Q8WXA3 655 aa21.7■■□□□ 1.06
SYNGR3-204ENST00000564642 TRIB2Q92519 343 aa21.7■■□□□ 1.06
SYNGR3-204ENST00000564642 APBA2Q99767 749 aa21.7■■□□□ 1.06
SYNGR3-204ENST00000564642 SLF1Q9BQI6 1058 aa21.7■■□□□ 1.06
SYNGR3-204ENST00000564642 DSCC1Q9BVC3 393 aa21.7■■□□□ 1.06
SYNGR3-204ENST00000564642 RNF41Q9H4P4 317 aaPredicted RBP21.7■■□□□ 1.06
SYNGR3-204ENST00000564642 IL17RBQ9NRM6 502 aa21.7■■□□□ 1.06
SYNGR3-204ENST00000564642 VWA5AO00534 786 aa21.69■■□□□ 1.06
SYNGR3-204ENST00000564642 ZKSCAN1P17029 563 aaPredicted RBP21.69■■□□□ 1.06
SYNGR3-204ENST00000564642 ERCC3P19447 782 aa21.69■■□□□ 1.06
SYNGR3-204ENST00000564642 GJA8P48165 433 aa21.69■■□□□ 1.06
SYNGR3-204ENST00000564642 TMEM132BQ14DG7 1078 aa21.69■■□□□ 1.06
SYNGR3-204ENST00000564642 PRPF38AQ8NAV1 312 aaKnown RBP21.69■■□□□ 1.06
SYNGR3-204ENST00000564642 MROH8Q9H579 483 aa21.69■■□□□ 1.06
SYNGR3-204ENST00000564642 CTNNA3Q9UI47 895 aa21.69■■□□□ 1.06
SYNGR3-204ENST00000564642 ISY1Q9ULR0 285 aaKnown RBP21.69■■□□□ 1.06
SYNGR3-204ENST00000564642 CTDP1Q9Y5B0 961 aaPredicted RBP21.69■■□□□ 1.06
SYNGR3-204ENST00000564642 NMT2O60551 498 aa21.68■■□□□ 1.06
SYNGR3-204ENST00000564642 SLC25A27O95847 323 aa21.68■■□□□ 1.06
SYNGR3-204ENST00000564642 BMP3P12645 472 aa21.68■■□□□ 1.06
SYNGR3-204ENST00000564642 GRB14Q14449 540 aa21.68■■□□□ 1.06
SYNGR3-204ENST00000564642 CENPQQ7L2Z9 268 aaPredicted RBP21.68■■□□□ 1.06
SYNGR3-204ENST00000564642 STAG1Q8WVM7 1258 aa21.68■■□□□ 1.06
SYNGR3-204ENST00000564642 HMX1Q9NP08 348 aaPredicted RBP21.68■■□□□ 1.06
SYNGR3-204ENST00000564642 FEM1BQ9UK73 627 aa21.68■■□□□ 1.06
SYNGR3-204ENST00000564642 RPTORQ8N122 1335 aa21.67■■□□□ 1.06
SYNGR3-204ENST00000564642 SGPL1O95470 568 aa21.67■■□□□ 1.06
SYNGR3-204ENST00000564642 STAT3P40763 770 aa21.67■■□□□ 1.06
SYNGR3-204ENST00000564642 HABP4Q5JVS0 413 aaKnown RBP21.67■■□□□ 1.06
SYNGR3-204ENST00000564642 DPP9Q86TI2 863 aa21.67■■□□□ 1.06
SYNGR3-204ENST00000564642 U2AF1L4Q8WU68 220 aaKnown RBP21.67■■□□□ 1.06
SYNGR3-204ENST00000564642 RAD50Q92878 1312 aa21.66■■□□□ 1.06
SYNGR3-204ENST00000564642 ZBED4O75132 1171 aa21.66■■□□□ 1.06
SYNGR3-204ENST00000564642 CHMLP26374 656 aa21.66■■□□□ 1.06
SYNGR3-204ENST00000564642 SLC1A4P43007 532 aa21.66■■□□□ 1.06
SYNGR3-204ENST00000564642 TRIM32Q13049 653 aa21.66■■□□□ 1.06
SYNGR3-204ENST00000564642 CCL14Q16627 93 aa21.66■■□□□ 1.06
SYNGR3-204ENST00000564642 IMMTQ16891 758 aaKnown RBP21.66■■□□□ 1.06
SYNGR3-204ENST00000564642 KIFC2Q96AC6 838 aa21.66■■□□□ 1.06
SYNGR3-204ENST00000564642 CHMP4CQ96CF2 233 aa21.66■■□□□ 1.06
SYNGR3-204ENST00000564642 DEFB118Q96PH6 123 aa21.66■■□□□ 1.06
SYNGR3-204ENST00000564642 NBPF3Q9H094 633 aa21.66■■□□□ 1.06
SYNGR3-204ENST00000564642 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.66■■□□□ 1.06
SYNGR3-204ENST00000564642 TCP11L1Q9NUJ3 509 aa21.66■■□□□ 1.06
SYNGR3-204ENST00000564642 ZNFX1Q9P2E3 1918 aaKnown RBP21.65■■□□□ 1.06
SYNGR3-204ENST00000564642 LAMA4Q16363 1823 aa21.65■■□□□ 1.06
SYNGR3-204ENST00000564642 TFRCP02786 760 aaKnown RBP21.65■■□□□ 1.06
SYNGR3-204ENST00000564642 CAPN2P17655 700 aa21.65■■□□□ 1.06
SYNGR3-204ENST00000564642 MCCP23508 829 aa21.65■■□□□ 1.06
SYNGR3-204ENST00000564642 ADORA2AP29274 412 aa21.65■■□□□ 1.06
SYNGR3-204ENST00000564642 IKQ13123 557 aaPredicted RBP21.65■■□□□ 1.06
SYNGR3-204ENST00000564642 RIOX2Q8IUF8 465 aa21.65■■□□□ 1.06
SYNGR3-204ENST00000564642 TBC1D10CQ8IV04 446 aa21.65■■□□□ 1.06
SYNGR3-204ENST00000564642 CHURC1Q8WUH1 139 aa21.65■■□□□ 1.06
SYNGR3-204ENST00000564642 ESR2Q92731 530 aa21.65■■□□□ 1.06
SYNGR3-204ENST00000564642 GMCL1Q96IK5 515 aa21.65■■□□□ 1.06
SYNGR3-204ENST00000564642 PAK6Q9NQU5 681 aaPredicted RBP21.65■■□□□ 1.06
SYNGR3-204ENST00000564642 SLC5A4Q9NY91 659 aa21.65■■□□□ 1.06
SYNGR3-204ENST00000564642 TMEM232C9JQI7 657 aa21.64■■□□□ 1.05
SYNGR3-204ENST00000564642 HOXC6P09630 235 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms