RNA–Protein interactions for RNA: ENST00000564317.5

CDH11-209, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-209ENST00000564317 FRMPD2Q68DX3 1309 aaPredicted RBP18.16■□□□□ 0.5
CDH11-209ENST00000564317 DDAH1O94760 285 aa18.15■□□□□ 0.5
CDH11-209ENST00000564317 BMP3P12645 472 aa18.15■□□□□ 0.5
CDH11-209ENST00000564317 MAP2K2P36507 400 aa18.15■□□□□ 0.5
CDH11-209ENST00000564317 SLC1A4P43007 532 aa18.15■□□□□ 0.5
CDH11-209ENST00000564317 ZNF543Q08ER8 600 aa18.15■□□□□ 0.5
CDH11-209ENST00000564317 GRM4Q14833 912 aa18.15■□□□□ 0.5
CDH11-209ENST00000564317 CCDC96Q2M329 555 aa18.15■□□□□ 0.5
CDH11-209ENST00000564317 KCTD1Q719H9 257 aa18.15■□□□□ 0.5
CDH11-209ENST00000564317 IFNL1Q8IU54 200 aa18.15■□□□□ 0.5
CDH11-209ENST00000564317 NUP133Q8WUM0 1156 aa18.15■□□□□ 0.5
CDH11-209ENST00000564317 SLC12A7Q9Y666 1083 aa18.15■□□□□ 0.5
CDH11-209ENST00000564317 PDHXO00330 501 aa18.14■□□□□ 0.49
CDH11-209ENST00000564317 GOLGA8HP0CJ92 632 aa18.14■□□□□ 0.49
CDH11-209ENST00000564317 EVCP57679 992 aa18.14■□□□□ 0.49
CDH11-209ENST00000564317 INHBEP58166 350 aa18.14■□□□□ 0.49
CDH11-209ENST00000564317 TTBK2Q6IQ55 1244 aa18.14■□□□□ 0.49
CDH11-209ENST00000564317 CATSPERGQ6ZRH7 1159 aa18.14■□□□□ 0.49
CDH11-209ENST00000564317 NOL8Q76FK4 1167 aaKnown RBP18.14■□□□□ 0.49
CDH11-209ENST00000564317 MICU3Q86XE3 530 aa18.14■□□□□ 0.49
CDH11-209ENST00000564317 TANGO6Q9C0B7 1094 aa18.14■□□□□ 0.49
CDH11-209ENST00000564317 FBXO28Q9NVF7 368 aa18.14■□□□□ 0.49
CDH11-209ENST00000564317 HPS5Q9UPZ3 1129 aa18.14■□□□□ 0.49
CDH11-209ENST00000564317 GOLGA8BA8MQT2 603 aa18.13■□□□□ 0.49
CDH11-209ENST00000564317 USP17L15C9J2P7 530 aa18.13■□□□□ 0.49
CDH11-209ENST00000564317 USP17L13C9JLJ4 530 aa18.13■□□□□ 0.49
CDH11-209ENST00000564317 USP17L11C9JVI0 530 aa18.13■□□□□ 0.49
CDH11-209ENST00000564317 USP17L18D6R9N7 530 aa18.13■□□□□ 0.49
CDH11-209ENST00000564317 USP17L22D6RA61 530 aa18.13■□□□□ 0.49
CDH11-209ENST00000564317 USP17L17D6RBQ6 530 aa18.13■□□□□ 0.49
CDH11-209ENST00000564317 USP17L19D6RCP7 530 aa18.13■□□□□ 0.49
CDH11-209ENST00000564317 USP17L20D6RJB6 530 aa18.13■□□□□ 0.49
CDH11-209ENST00000564317 CD2BP2O95400 341 aaKnown RBP18.13■□□□□ 0.49
CDH11-209ENST00000564317 HOXA7P31268 230 aaPredicted RBP18.13■□□□□ 0.49
CDH11-209ENST00000564317 USP17L24Q0WX57 530 aa18.13■□□□□ 0.49
CDH11-209ENST00000564317 CCDC144CPQ8IYA2 1237 aa18.13■□□□□ 0.49
CDH11-209ENST00000564317 STAG2Q8N3U4 1231 aa18.13■□□□□ 0.49
CDH11-209ENST00000564317 ASCC2Q9H1I8 757 aaPredicted RBP18.13■□□□□ 0.49
CDH11-209ENST00000564317 GPCPD1Q9NPB8 672 aa18.13■□□□□ 0.49
CDH11-209ENST00000564317 MAD2L2Q9UI95 211 aa18.13■□□□□ 0.49
CDH11-209ENST00000564317 TPCN1Q9ULQ1 816 aa18.13■□□□□ 0.49
CDH11-209ENST00000564317 ISY1Q9ULR0 285 aaKnown RBP18.13■□□□□ 0.49
CDH11-209ENST00000564317 NAP1L2Q9ULW6 460 aaPredicted RBP18.13■□□□□ 0.49
CDH11-209ENST00000564317 SLC45A1Q9Y2W3 748 aa18.13■□□□□ 0.49
CDH11-209ENST00000564317 TMEM232C9JQI7 657 aa18.12■□□□□ 0.49
CDH11-209ENST00000564317 ZBTB43O43298 467 aa18.12■□□□□ 0.49
CDH11-209ENST00000564317 LARGE1O95461 756 aa18.12■□□□□ 0.49
CDH11-209ENST00000564317 PARP1P09874 1014 aaKnown RBP18.12■□□□□ 0.49
CDH11-209ENST00000564317 CYP2C8P10632 490 aa18.12■□□□□ 0.49
CDH11-209ENST00000564317 CPVLQ9H3G5 476 aa18.12■□□□□ 0.49
CDH11-209ENST00000564317 PALM3A6NDB9 673 aaPredicted RBP18.11■□□□□ 0.49
CDH11-209ENST00000564317 GOLGA8AA7E2F4 631 aa18.11■□□□□ 0.49
CDH11-209ENST00000564317 FLOT1O75955 427 aa18.11■□□□□ 0.49
CDH11-209ENST00000564317 PDIA3P30101 505 aaKnown RBP18.11■□□□□ 0.49
CDH11-209ENST00000564317 SLC16A2P36021 539 aa18.11■□□□□ 0.49
CDH11-209ENST00000564317 PABPC4Q13310 644 aaKnown RBP eCLIP18.11■□□□□ 0.49
CDH11-209ENST00000564317 ANKRD1Q15327 319 aa18.11■□□□□ 0.49
CDH11-209ENST00000564317 SLC35G1Q2M3R5 365 aa18.11■□□□□ 0.49
CDH11-209ENST00000564317 ASPRV1Q53RT3 343 aa18.11■□□□□ 0.49
CDH11-209ENST00000564317 POTEEQ6S8J3 1075 aa18.11■□□□□ 0.49
CDH11-209ENST00000564317 SYNE3Q6ZMZ3 975 aa18.11■□□□□ 0.49
CDH11-209ENST00000564317 REM2Q8IYK8 340 aaPredicted RBP18.11■□□□□ 0.49
CDH11-209ENST00000564317 MAP3K14Q99558 947 aa18.11■□□□□ 0.49
CDH11-209ENST00000564317 P2RX7Q99572 595 aaKnown RBP18.11■□□□□ 0.49
CDH11-209ENST00000564317 ZCCHC17Q9NP64 241 aaKnown RBP18.11■□□□□ 0.49
CDH11-209ENST00000564317 FAM217BQ9NTX9 383 aaPredicted RBP18.11■□□□□ 0.49
CDH11-209ENST00000564317 NID2Q14112 1375 aa18.11■□□□□ 0.49
CDH11-209ENST00000564317 RLFQ13129 1914 aa18.11■□□□□ 0.49
CDH11-209ENST00000564317 ADGRA2Q96PE1 1338 aa18.1■□□□□ 0.49
CDH11-209ENST00000564317 SPDYE16A6NNV3 312 aaPredicted RBP18.1■□□□□ 0.49
CDH11-209ENST00000564317 PLEKHA8P1O95397 391 aa18.1■□□□□ 0.49
CDH11-209ENST00000564317 CALM1P0DP23 149 aa18.1■□□□□ 0.49
CDH11-209ENST00000564317 CALM2P0DP24 149 aa18.1■□□□□ 0.49
CDH11-209ENST00000564317 CALM3P0DP25 149 aa18.1■□□□□ 0.49
CDH11-209ENST00000564317 OSBPP22059 807 aa18.1■□□□□ 0.49
CDH11-209ENST00000564317 RCAN1P53805 252 aa18.1■□□□□ 0.49
CDH11-209ENST00000564317 IRX3P78415 501 aaPredicted RBP18.1■□□□□ 0.49
CDH11-209ENST00000564317 GPATCH4Q5T3I0 446 aaKnown RBP18.1■□□□□ 0.49
CDH11-209ENST00000564317 SAMD1Q6SPF0 538 aaPredicted RBP18.1■□□□□ 0.49
CDH11-209ENST00000564317 BTNL9Q6UXG8 535 aa18.1■□□□□ 0.49
CDH11-209ENST00000564317 NBPF11Q86T75 865 aa18.1■□□□□ 0.49
CDH11-209ENST00000564317 FANCBQ8NB91 859 aa18.1■□□□□ 0.49
CDH11-209ENST00000564317 SLF1Q9BQI6 1058 aa18.1■□□□□ 0.49
CDH11-209ENST00000564317 UBA5Q9GZZ9 404 aa18.1■□□□□ 0.49
CDH11-209ENST00000564317 FEM1BQ9UK73 627 aa18.1■□□□□ 0.49
CDH11-209ENST00000564317 PPP1R9AQ9ULJ8 1098 aa18.1■□□□□ 0.49
CDH11-209ENST00000564317 PARP14Q460N5 1801 aa18.09■□□□□ 0.49
CDH11-209ENST00000564317 ST18O60284 1047 aa18.09■□□□□ 0.49
CDH11-209ENST00000564317 PLA2G6O60733 806 aa18.09■□□□□ 0.49
CDH11-209ENST00000564317 CDC27P30260 824 aa18.09■□□□□ 0.49
CDH11-209ENST00000564317 DSG3P32926 999 aa18.09■□□□□ 0.49
CDH11-209ENST00000564317 METAP2P50579 478 aaKnown RBP eCLIP18.09■□□□□ 0.49
CDH11-209ENST00000564317 STAT2P52630 851 aa18.09■□□□□ 0.49
CDH11-209ENST00000564317 STK3Q13188 491 aa18.09■□□□□ 0.49
CDH11-209ENST00000564317 TAF1CQ15572 869 aaPredicted RBP18.09■□□□□ 0.49
CDH11-209ENST00000564317 ME3Q16798 604 aa18.09■□□□□ 0.49
CDH11-209ENST00000564317 RTN1Q16799 776 aa18.09■□□□□ 0.49
CDH11-209ENST00000564317 OTUD7BQ6GQQ9 843 aa18.09■□□□□ 0.49
CDH11-209ENST00000564317 FAM160B2Q86V87 743 aa18.09■□□□□ 0.49
CDH11-209ENST00000564317 CTCFLQ8NI51 663 aaPredicted RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms