RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 FARP2O94887 1054 aaPredicted RBP23.76■■□□□ 1.39
SHCBP1-203ENST00000564272 GRB14Q14449 540 aa23.76■■□□□ 1.39
SHCBP1-203ENST00000564272 PLS1Q14651 629 aa23.76■■□□□ 1.39
SHCBP1-203ENST00000564272 MCMDC2Q4G0Z9 681 aa23.76■■□□□ 1.39
SHCBP1-203ENST00000564272 ZNF589Q86UQ0 364 aaPredicted RBP23.76■■□□□ 1.39
SHCBP1-203ENST00000564272 TRMT44Q8IYL2 757 aaKnown RBP23.76■■□□□ 1.39
SHCBP1-203ENST00000564272 RPTORQ8N122 1335 aa23.76■■□□□ 1.39
SHCBP1-203ENST00000564272 ZNF236Q9UL36 1845 aa23.75■■□□□ 1.39
SHCBP1-203ENST00000564272 NDUFB10O96000 172 aa23.75■■□□□ 1.39
SHCBP1-203ENST00000564272 TFRCP02786 760 aaKnown RBP23.75■■□□□ 1.39
SHCBP1-203ENST00000564272 TSPY3P0CV98 308 aa23.75■■□□□ 1.39
SHCBP1-203ENST00000564272 TSPY8P0CW00 308 aa23.75■■□□□ 1.39
SHCBP1-203ENST00000564272 ERCC3P19447 782 aa23.75■■□□□ 1.39
SHCBP1-203ENST00000564272 MAP3K21Q5TCX8 1036 aa23.75■■□□□ 1.39
SHCBP1-203ENST00000564272 LRRC47Q8N1G4 583 aaKnown RBP23.75■■□□□ 1.39
SHCBP1-203ENST00000564272 NEDD1Q8NHV4 660 aa23.75■■□□□ 1.39
SHCBP1-203ENST00000564272 HMX1Q9NP08 348 aaPredicted RBP23.75■■□□□ 1.39
SHCBP1-203ENST00000564272 INCENPQ9NQS7 918 aa23.75■■□□□ 1.39
SHCBP1-203ENST00000564272 MTMR4Q9NYA4 1195 aa23.75■■□□□ 1.39
SHCBP1-203ENST00000564272 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.75■■□□□ 1.39
SHCBP1-203ENST00000564272 F5H6K3 240 aa23.74■■□□□ 1.39
SHCBP1-203ENST00000564272 TFAP4Q01664 338 aa23.74■■□□□ 1.39
SHCBP1-203ENST00000564272 KLRC3Q07444 240 aa23.74■■□□□ 1.39
SHCBP1-203ENST00000564272 TMEM132BQ14DG7 1078 aa23.74■■□□□ 1.39
SHCBP1-203ENST00000564272 SHCBP1Q8NEM2 672 aa23.74■■□□□ 1.39
SHCBP1-203ENST00000564272 CRISPLD2Q9H0B8 497 aa23.74■■□□□ 1.39
SHCBP1-203ENST00000564272 FLRT1Q9NZU1 646 aa23.74■■□□□ 1.39
SHCBP1-203ENST00000564272 PPP1R9AQ9ULJ8 1098 aa23.74■■□□□ 1.39
SHCBP1-203ENST00000564272 TACC3Q9Y6A5 838 aa23.74■■□□□ 1.39
SHCBP1-203ENST00000564272 CACNB2Q08289 660 aaPredicted RBP23.73■■□□□ 1.39
SHCBP1-203ENST00000564272 TICAM2Q86XR7 235 aa23.73■■□□□ 1.39
SHCBP1-203ENST00000564272 NPLOC4Q8TAT6 608 aa23.73■■□□□ 1.39
SHCBP1-203ENST00000564272 ADAMTS5Q9UNA0 930 aa23.73■■□□□ 1.39
SHCBP1-203ENST00000564272 CCDC171Q6TFL3 1326 aa23.73■■□□□ 1.39
SHCBP1-203ENST00000564272 TTLL1O95922 423 aa23.72■■□□□ 1.39
SHCBP1-203ENST00000564272 SDSP20132 328 aa23.72■■□□□ 1.39
SHCBP1-203ENST00000564272 ADORA2AP29274 412 aa23.72■■□□□ 1.39
SHCBP1-203ENST00000564272 ALX1Q15699 326 aa23.72■■□□□ 1.39
SHCBP1-203ENST00000564272 NCAPG2Q86XI2 1143 aa23.72■■□□□ 1.39
SHCBP1-203ENST00000564272 ANAPC4Q9UJX5 808 aa23.72■■□□□ 1.39
SHCBP1-203ENST00000564272 VWA5AO00534 786 aa23.71■■□□□ 1.39
SHCBP1-203ENST00000564272 HOXC6P09630 235 aa23.71■■□□□ 1.39
SHCBP1-203ENST00000564272 HSPD1P10809 573 aaKnown RBP23.71■■□□□ 1.39
SHCBP1-203ENST00000564272 CCND3P30281 292 aaPredicted RBP23.71■■□□□ 1.39
SHCBP1-203ENST00000564272 DIS3LQ8TF46 1054 aaKnown RBP23.71■■□□□ 1.39
SHCBP1-203ENST00000564272 MKL1Q969V6 931 aa23.71■■□□□ 1.39
SHCBP1-203ENST00000564272 SLF1Q9BQI6 1058 aa23.71■■□□□ 1.39
SHCBP1-203ENST00000564272 MROH8Q9H579 483 aa23.71■■□□□ 1.39
SHCBP1-203ENST00000564272 FGAP02671 866 aa23.7■■□□□ 1.38
SHCBP1-203ENST00000564272 PDE4AP27815 886 aa23.7■■□□□ 1.38
SHCBP1-203ENST00000564272 GMCL1P1Q8NEA9 526 aa23.7■■□□□ 1.38
SHCBP1-203ENST00000564272 REPS2Q8NFH8 660 aa23.7■■□□□ 1.38
SHCBP1-203ENST00000564272 TSPY2A6NKD2 308 aa23.69■■□□□ 1.38
SHCBP1-203ENST00000564272 NMT2O60551 498 aa23.69■■□□□ 1.38
SHCBP1-203ENST00000564272 DPP9Q86TI2 863 aa23.69■■□□□ 1.38
SHCBP1-203ENST00000564272 ZNF214Q9UL59 606 aaPredicted RBP23.69■■□□□ 1.38
SHCBP1-203ENST00000564272 SYNPO2Q9UMS6 1093 aa23.69■■□□□ 1.38
SHCBP1-203ENST00000564272 ZMYM6O95789 1325 aa23.68■■□□□ 1.38
SHCBP1-203ENST00000564272 STRNO43815 780 aa23.68■■□□□ 1.38
SHCBP1-203ENST00000564272 RANBP6O60518 1105 aaKnown RBP23.68■■□□□ 1.38
SHCBP1-203ENST00000564272 COBLO75128 1261 aa23.68■■□□□ 1.38
SHCBP1-203ENST00000564272 HAND2P61296 217 aa23.68■■□□□ 1.38
SHCBP1-203ENST00000564272 MFSD14CQ5VZR4 134 aa23.68■■□□□ 1.38
SHCBP1-203ENST00000564272 SLFN13Q68D06 897 aa23.68■■□□□ 1.38
SHCBP1-203ENST00000564272 DPF3Q92784 378 aa23.68■■□□□ 1.38
SHCBP1-203ENST00000564272 DIAPH3Q9NSV4 1193 aa23.68■■□□□ 1.38
SHCBP1-203ENST00000564272 ORC4O43929 436 aa23.67■■□□□ 1.38
SHCBP1-203ENST00000564272 SLC25A27O95847 323 aa23.67■■□□□ 1.38
SHCBP1-203ENST00000564272 CAPN2P17655 700 aa23.67■■□□□ 1.38
SHCBP1-203ENST00000564272 CYP2C19P33261 490 aa23.67■■□□□ 1.38
SHCBP1-203ENST00000564272 STAT3P40763 770 aa23.67■■□□□ 1.38
SHCBP1-203ENST00000564272 CWC27Q6UX04 472 aaKnown RBP23.67■■□□□ 1.38
SHCBP1-203ENST00000564272 RIOX2Q8IUF8 465 aa23.67■■□□□ 1.38
SHCBP1-203ENST00000564272 CHMP4CQ96CF2 233 aa23.67■■□□□ 1.38
SHCBP1-203ENST00000564272 PAWRQ96IZ0 340 aaKnown RBP23.67■■□□□ 1.38
SHCBP1-203ENST00000564272 HTATIP2Q9BUP3 242 aa23.67■■□□□ 1.38
SHCBP1-203ENST00000564272 IL17RBQ9NRM6 502 aa23.67■■□□□ 1.38
SHCBP1-203ENST00000564272 FRMPD3Q5JV73 1810 aa23.66■■□□□ 1.38
SHCBP1-203ENST00000564272 RRP12Q5JTH9 1297 aaKnown RBP23.66■■□□□ 1.38
SHCBP1-203ENST00000564272 ABRAQ8N0Z2 381 aa23.66■■□□□ 1.38
SHCBP1-203ENST00000564272 NBPF3Q9H094 633 aa23.66■■□□□ 1.38
SHCBP1-203ENST00000564272 TOMM22Q9NS69 142 aa23.66■■□□□ 1.38
SHCBP1-203ENST00000564272 OGDHLQ9ULD0 1010 aa23.66■■□□□ 1.38
SHCBP1-203ENST00000564272 ISY1Q9ULR0 285 aaKnown RBP23.66■■□□□ 1.38
SHCBP1-203ENST00000564272 STX8Q9UNK0 236 aa23.66■■□□□ 1.38
SHCBP1-203ENST00000564272 H0YGN5 161 aa23.65■■□□□ 1.38
SHCBP1-203ENST00000564272 IGHA2P01877 340 aa23.65■■□□□ 1.38
SHCBP1-203ENST00000564272 FGRP09769 529 aa23.65■■□□□ 1.38
SHCBP1-203ENST00000564272 FCER1AP12319 257 aa23.65■■□□□ 1.38
SHCBP1-203ENST00000564272 BMP3P12645 472 aa23.65■■□□□ 1.38
SHCBP1-203ENST00000564272 MNX1P50219 401 aaPredicted RBP23.65■■□□□ 1.38
SHCBP1-203ENST00000564272 MFAP1P55081 439 aaKnown RBP23.65■■□□□ 1.38
SHCBP1-203ENST00000564272 ANKLE1Q8NAG6 615 aa23.65■■□□□ 1.38
SHCBP1-203ENST00000564272 PRPF38AQ8NAV1 312 aaKnown RBP23.65■■□□□ 1.38
SHCBP1-203ENST00000564272 KIFC2Q96AC6 838 aa23.65■■□□□ 1.38
SHCBP1-203ENST00000564272 MMP19Q99542 508 aa23.65■■□□□ 1.38
SHCBP1-203ENST00000564272 FEM1BQ9UK73 627 aa23.65■■□□□ 1.38
SHCBP1-203ENST00000564272 GSPT1P15170 499 aaKnown RBP23.64■■□□□ 1.37
SHCBP1-203ENST00000564272 OLFML2BQ68BL8 750 aa23.64■■□□□ 1.37
SHCBP1-203ENST00000564272 LHX8Q68G74 356 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms