RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 POU3F2P20265 443 aaPredicted RBP3.61□□□□□ -1.83
CHD9-209ENST00000564255 SOX5P35711 763 aa3.61□□□□□ -1.83
CHD9-209ENST00000564255 GRIA2P42262 883 aa3.61□□□□□ -1.83
CHD9-209ENST00000564255 TRIM28Q13263 835 aaKnown RBP3.61□□□□□ -1.83
CHD9-209ENST00000564255 AUHQ13825 339 aaKnown RBP3.61□□□□□ -1.83
CHD9-209ENST00000564255 CCDC181Q5TID7 509 aa3.61□□□□□ -1.83
CHD9-209ENST00000564255 SEZ6L2Q6UXD5 910 aa3.61□□□□□ -1.83
CHD9-209ENST00000564255 NSMFQ6X4W1 530 aa3.61□□□□□ -1.83
CHD9-209ENST00000564255 SYTL5Q8TDW5 730 aaPredicted RBP3.61□□□□□ -1.83
CHD9-209ENST00000564255 TRIM39Q9HCM9 518 aa3.61□□□□□ -1.83
CHD9-209ENST00000564255 HOMER2Q9NSB8 354 aa3.61□□□□□ -1.83
CHD9-209ENST00000564255 FAM86C1Q9NVL1 165 aa3.61□□□□□ -1.83
CHD9-209ENST00000564255 FHOD1Q9Y613 1164 aa3.61□□□□□ -1.83
CHD9-209ENST00000564255 GNB5O14775 395 aa3.6□□□□□ -1.83
CHD9-209ENST00000564255 DLX3O60479 287 aa3.6□□□□□ -1.83
CHD9-209ENST00000564255 SLITRK5O94991 958 aa3.6□□□□□ -1.83
CHD9-209ENST00000564255 ITGA4P13612 1032 aa3.6□□□□□ -1.83
CHD9-209ENST00000564255 PMLP29590 882 aa3.6□□□□□ -1.83
CHD9-209ENST00000564255 GRB10Q13322 594 aa3.6□□□□□ -1.83
CHD9-209ENST00000564255 NBPF9Q3BBW0 867 aa3.6□□□□□ -1.83
CHD9-209ENST00000564255 FDX2Q6P4F2 183 aa3.6□□□□□ -1.83
CHD9-209ENST00000564255 AFAP1L2Q8N4X5 818 aa3.6□□□□□ -1.83
CHD9-209ENST00000564255 C12orf50Q8NA57 414 aaPredicted RBP3.6□□□□□ -1.83
CHD9-209ENST00000564255 IPO9Q96P70 1041 aaKnown RBP3.6□□□□□ -1.83
CHD9-209ENST00000564255 MKRN2Q9H000 416 aaKnown RBP3.6□□□□□ -1.83
CHD9-209ENST00000564255 ENAMQ9NRM1 1142 aa3.6□□□□□ -1.83
CHD9-209ENST00000564255 LRP2BPQ9P2M1 347 aa3.6□□□□□ -1.83
CHD9-209ENST00000564255 AKT3Q9Y243 479 aa3.6□□□□□ -1.83
CHD9-209ENST00000564255 DIS3Q9Y2L1 958 aaKnown RBP3.6□□□□□ -1.83
CHD9-209ENST00000564255 ATP8A1Q9Y2Q0 1164 aa3.6□□□□□ -1.83
CHD9-209ENST00000564255 FAM229AH3BQW9 127 aa3.6□□□□□ -1.83
CHD9-209ENST00000564255 PDE8AO60658 829 aa3.6□□□□□ -1.83
CHD9-209ENST00000564255 SNRPNP63162 240 aaKnown RBP3.6□□□□□ -1.83
CHD9-209ENST00000564255 LCE2AQ5TA79 106 aaPredicted RBP3.6□□□□□ -1.83
CHD9-209ENST00000564255 DDX42Q86XP3 938 aaKnown RBP eCLIP3.6□□□□□ -1.83
CHD9-209ENST00000564255 AGGF1Q8N302 714 aaeCLIP3.6□□□□□ -1.835e-8■■■■□ 20.3
CHD9-209ENST00000564255 CRACR2BQ8N4Y2 399 aaPredicted RBP3.6□□□□□ -1.83
CHD9-209ENST00000564255 FAM46AQ96IP4 442 aaKnown RBP3.6□□□□□ -1.83
CHD9-209ENST00000564255 TARS2Q9BW92 718 aaKnown RBP3.6□□□□□ -1.83
CHD9-209ENST00000564255 LGR4Q9BXB1 951 aa3.6□□□□□ -1.83
CHD9-209ENST00000564255 RRAGCQ9HB90 399 aa3.6□□□□□ -1.83
CHD9-209ENST00000564255 SSU72Q9NP77 194 aaKnown RBP3.6□□□□□ -1.83
CHD9-209ENST00000564255 PIK3R2O00459 728 aa3.59□□□□□ -1.83
CHD9-209ENST00000564255 NOP56O00567 594 aaKnown RBP3.59□□□□□ -1.83
CHD9-209ENST00000564255 NPTXRO95502 500 aa3.59□□□□□ -1.83
CHD9-209ENST00000564255 EYA4O95677 639 aa3.59□□□□□ -1.83
CHD9-209ENST00000564255 SCG5P05408 212 aa3.59□□□□□ -1.83
CHD9-209ENST00000564255 ETV3P41162 512 aa3.59□□□□□ -1.83
CHD9-209ENST00000564255 PREPP48147 710 aa3.59□□□□□ -1.83
CHD9-209ENST00000564255 ZNF445P59923 1031 aa3.59□□□□□ -1.83
CHD9-209ENST00000564255 MAP4K2Q12851 820 aa3.59□□□□□ -1.83
CHD9-209ENST00000564255 NTRK3Q16288 839 aa3.59□□□□□ -1.83
CHD9-209ENST00000564255 BRDTQ58F21 947 aaPredicted RBP3.59□□□□□ -1.83
CHD9-209ENST00000564255 LETMD1Q6P1Q0 360 aa3.59□□□□□ -1.83
CHD9-209ENST00000564255 RIN3Q8TB24 985 aa3.59□□□□□ -1.83
CHD9-209ENST00000564255 SLC7A14Q8TBB6 771 aa3.59□□□□□ -1.83
CHD9-209ENST00000564255 XAGE3Q8WTP9 111 aa3.59□□□□□ -1.83
CHD9-209ENST00000564255 CCDC140Q96MF4 163 aa3.59□□□□□ -1.83
CHD9-209ENST00000564255 IER2Q9BTL4 223 aa3.59□□□□□ -1.83
CHD9-209ENST00000564255 EFCAB14O75071 495 aa3.59□□□□□ -1.84
CHD9-209ENST00000564255 CNGA1P29973 690 aa3.59□□□□□ -1.84
CHD9-209ENST00000564255 GFRA1P56159 465 aa3.59□□□□□ -1.84
CHD9-209ENST00000564255 GABREP78334 506 aa3.59□□□□□ -1.84
CHD9-209ENST00000564255 EXOSC10Q01780 885 aaKnown RBP3.59□□□□□ -1.84
CHD9-209ENST00000564255 CDPF1Q6NVV7 123 aa3.59□□□□□ -1.84
CHD9-209ENST00000564255 CDH24Q86UP0 819 aa3.59□□□□□ -1.84
CHD9-209ENST00000564255 NEDD1Q8NHV4 660 aa3.59□□□□□ -1.84
CHD9-209ENST00000564255 BTN2A2Q8WVV5 523 aa3.59□□□□□ -1.84
CHD9-209ENST00000564255 MIPEPQ99797 713 aa3.59□□□□□ -1.84
CHD9-209ENST00000564255 PRDM14Q9GZV8 571 aa3.59□□□□□ -1.84
CHD9-209ENST00000564255 CHPF2Q9P2E5 772 aa3.59□□□□□ -1.84
CHD9-209ENST00000564255 CGGBP1Q9UFW8 167 aaPredicted RBP3.59□□□□□ -1.84
CHD9-209ENST00000564255 SFMBT1Q9UHJ3 866 aa3.59□□□□□ -1.84
CHD9-209ENST00000564255 PCDHB12Q9Y5F1 795 aa3.59□□□□□ -1.84
CHD9-209ENST00000564255 EOMESO95936 686 aa3.58□□□□□ -1.84
CHD9-209ENST00000564255 S100BP04271 92 aaPredicted RBP3.58□□□□□ -1.84
CHD9-209ENST00000564255 HOXC12P31275 282 aa3.58□□□□□ -1.84
CHD9-209ENST00000564255 EVA1CP58658 441 aa3.58□□□□□ -1.84
CHD9-209ENST00000564255 CYP4F3Q08477 520 aa3.58□□□□□ -1.84
CHD9-209ENST00000564255 GTF2IRD2BQ6EKJ0 949 aa3.58□□□□□ -1.84
CHD9-209ENST00000564255 GPAT2Q6NUI2 795 aa3.58□□□□□ -1.84
CHD9-209ENST00000564255 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.58□□□□□ -1.84
CHD9-209ENST00000564255 ADAT2Q7Z6V5 191 aaKnown RBP3.58□□□□□ -1.84
CHD9-209ENST00000564255 GTF2IRD2Q86UP8 949 aa3.58□□□□□ -1.84
CHD9-209ENST00000564255 LRRTM3Q86VH5 581 aa3.58□□□□□ -1.84
CHD9-209ENST00000564255 LENG1Q96BZ8 264 aaPredicted RBP3.58□□□□□ -1.84
CHD9-209ENST00000564255 C1orf159Q96HA4 380 aa3.58□□□□□ -1.84
CHD9-209ENST00000564255 CEP41Q9BYV8 373 aa3.58□□□□□ -1.84
CHD9-209ENST00000564255 NKX2-4Q9H2Z4 354 aa3.58□□□□□ -1.84
CHD9-209ENST00000564255 AKTIPQ9H8T0 292 aa3.58□□□□□ -1.84
CHD9-209ENST00000564255 PRDM10Q9NQV6 1147 aa3.58□□□□□ -1.84
CHD9-209ENST00000564255 MCM8Q9UJA3 840 aa3.58□□□□□ -1.84
CHD9-209ENST00000564255 WASHC2CQ9Y4E1 1318 aa3.58□□□□□ -1.84
CHD9-209ENST00000564255 ALG1L2C9J202 215 aa3.58□□□□□ -1.84
CHD9-209ENST00000564255 ASLP04424 464 aa3.58□□□□□ -1.84
CHD9-209ENST00000564255 NFKB2Q00653 900 aa3.58□□□□□ -1.84
CHD9-209ENST00000564255 TESK1Q15569 626 aa3.58□□□□□ -1.84
CHD9-209ENST00000564255 PRRT3Q5FWE3 981 aa3.58□□□□□ -1.84
CHD9-209ENST00000564255 SLC35F1Q5T1Q4 408 aa3.58□□□□□ -1.84
CHD9-209ENST00000564255 POMZP3Q6PJE2 187 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms